KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:24 2014 Check: 00 .. Name: ENSTTRP00000015422/1-370 Len: 420 Check: 2561 Weight: 1.00 Name: bmy_19030T0/1-349 Len: 420 Check: 400 Weight: 1.00 Name: BACU010656/1-343 Len: 420 Check: 2951 Weight: 1.00 Name: ENSP00000303754/1-370 Len: 420 Check: 1743 Weight: 1.00 Name: ENSBTAP00000022180/1-370 Len: 420 Check: 926 Weight: 1.00 // 1 50 ENSTTRP00000015422/1-370 ---------- ---------- ---------- ---------- ---------M bmy_19030T0/1-349 AEVGPRPPGP CRKXLASAGV LRRRSGFGVR AARRPRGVPR RSRTRLRATM BACU010656/1-343 ---------- ---------- ---------- ---------- ---------M ENSP00000303754/1-370 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000022180/1-370 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000015422/1-370 SHPSPQAKPS NPSNPRVFLD VDVGGERVGR IVLELFADIV PKTAENFRAL bmy_19030T0/1-349 SHPSPQAKPS NPSNPRVFLD VDVGGERVGR IVLELFADIV PKTAENFRAL BACU010656/1-343 SHPSPQAKPS NPSNPRVFLD VDVGGERVGR IVLELFADIV PKTAENFRAL ENSP00000303754/1-370 SHPSPQAKPS NPSNPRVFFD VDIGGERVGR IVLELFADIV PKTAENFRAL ENSBTAP00000022180/1-370 SHPSPQAKPS NPSNPRVFFD VDIGGERVGR IVLELFADIV PKTAENFRAL 101 150 ENSTTRP00000015422/1-370 CTGEKGIGPT TGKPLHFKGC PFHRIIKKFM IQGGDFSNQN GTGGESIYGE bmy_19030T0/1-349 CTGEKGIGSS TGKPLHFKGC PFHRIIKKFM IQGGDFSNQN GTGGESIYGG BACU010656/1-343 CTGEKGIGPT TGKPLHFKGC PFHRIIKKFM IQGGDFSNQN GTGGESIYGG ENSP00000303754/1-370 CTGEKGIGHT TGKPLHFKGC PFHRIIKKFM IQGGDFSNQN GTGGESIYGE ENSBTAP00000022180/1-370 CTGEKGIGPT TGKPLHFKGC PFHRIIKKFM IQGGDFSNQN GTGGESIYGE 151 200 ENSTTRP00000015422/1-370 KFEDENFHYK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19030T0/1-349 KFEDENFHYK HDKEGLLSMA NAGRNTNGSQ FFITMAPTPH LDGKHVVFGQ BACU010656/1-343 KFEDENFHYK HDKEGLLSMA NAGRNTNGSQ FFITMAPTPH LDGKHVVFGQ ENSP00000303754/1-370 KFEDENFHYK HDREGLLSMA NAGRNTNGSQ FFITTVPTPH LDGKHVVFGQ ENSBTAP00000022180/1-370 KFEDENFHYK HDKEGLLSMA NAGSNTNGSQ FFITTVPTPH LDGKHVVFGQ 201 250 ENSTTRP00000015422/1-370 XXXXXXXXXX XXXXXXXGEK PAKL-CVTAD CGELKGGDDW GIFPKDGSGD bmy_19030T0/1-349 VIKGMGVARI LENVEVKGEK PAKVDKILLI TEDLKN---- -------IGN BACU010656/1-343 VIKGMGVARI LENVEVKGEK PAKL-CVTAE CGELKGGDDW GIFPKDGSGD ENSP00000303754/1-370 VIKGIGVARI LENVEVKGEK PAKL-CVIAE CGELKEGDDG GIFPKDGSGD ENSBTAP00000022180/1-370 VIKGMGVAKI LENVEVKGEK PAKL-CVIAE CGELKEGDDW GIFPKDGSGD 251 300 ENSTTRP00000015422/1-370 SHPDFPEDAD IDVKDVDKIL LITEDLKNIG NTFFKSQNWE MAIKKYTKVL bmy_19030T0/1-349 T---F----- ---------- ---------- ---FKSQNWE MAIKKYTKVL BACU010656/1-343 SHPDFPEDAD IDVKDVST-- ---------- ---------- -----FTWVK ENSP00000303754/1-370 SHPDFPEDAD IDLKDVDKIL LITEDLKNIG NTFFKSQNWE MAIKKYAEVL ENSBTAP00000022180/1-370 SHPDFPEDAD VDLKDVDKIL LISEDLKNIG NTFFKSQNWE MAIKKYTKVL 301 350 ENSTTRP00000015422/1-370 RYVEGSKAAT ENAGRAKLQP VTLSCLLNIG ACKLKLSDWQ GAVDSCLEAL bmy_19030T0/1-349 RYVEGSKAAT ENAGGAKLQP VALSCLLNIG ACKLKLSDWQ GAVDSCLE-- BACU010656/1-343 VYVEGSKAAT ENAGGAELQP VALSCLLNIG ACKLKLSDWQ GAVDSCLEAL ENSP00000303754/1-370 RYVDSSKAVI ETADRAKLQP IALSCVLNIG ACKLKMSNWQ GAIDSCLEAL ENSBTAP00000022180/1-370 RYVEGSRAAA EDADGAKLQP VALSCVLNIG ACKLKMSDWQ GAVDSCLEAL 351 400 ENSTTRP00000015422/1-370 EIDPANTKAL YRRAQGWQGL KEYDQALADL KKAQEIAPED KAIQAELLKV bmy_19030T0/1-349 ---------- ---------- -------ADL KKAQEIAPED KAIQAELRKV BACU010656/1-343 EIDPANTKAL YRRAQGWQGL KEYDQALADL KKAQEIAPED KAIQAELRKV ENSP00000303754/1-370 ELDPSNTKAL YRRAQGWQGL KEYDQALADL KKAQGIAPED KAIQAELLKV ENSBTAP00000022180/1-370 EIDPSNTKAL YRRAQGWQGL KEYDQALADL KKAQEIAPED KAIQAELLKV 401 450 ENSTTRP00000015422/1-370 KQKIKAQKDK EKAAYAKMFA bmy_19030T0/1-349 KQKIKAQKDX EKAAYAKMFA BACU010656/1-343 KQKIKAQKDK EKAAYAKMFA ENSP00000303754/1-370 KQKIKAQKDK EKAVYAKMFA ENSBTAP00000022180/1-370 KQKIKAQKDK EKAAYAKMFA