KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:25 2014 Check: 00 .. Name: ENSP00000356723/1-558 Len: 1368 Check: 7443 Weight: 1.00 Name: ENSBTAP00000022185/1-553 Len: 1368 Check: 648 Weight: 1.00 Name: ENSTTRP00000008993/1-557 Len: 1368 Check: 9826 Weight: 1.00 Name: bmy_13412T0/1-420 Len: 1368 Check: 2575 Weight: 1.00 Name: BACU000672/1-1365 Len: 1368 Check: 2725 Weight: 1.00 // 1 50 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 MAKKVAVIGA GVSGLISLKC CVDEGLKPTC FEKTEDIGGL WRFKENIEDG 51 100 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 LASIYQSVIT NTSKEMSCFS DFPMPEDFPN FLHNSKLLEY FRIFVKKFDL 101 150 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 LKYIQFQTTV LSVKKCPDFS STGQWVVVTE SNGKEQSAVF DAVMVCSGHH 151 200 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 ILPHLPLESF PGIQKFKGQY FHSRQYKHPE GFERKRILVI GIGNSASDIA 201 250 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 VELSKKAAQV FISTRHGSWV MGHISEDGYP WDMVFHTRFS SMLRNVLPRR 251 300 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 VVKWVMEQQM NRWFNHENYG LMPQNKYLMK EPILSDDLPS RILYGAIKVK 301 350 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 SRVKELTETS ALFEDGTVEE DIDVIVFATG YTFSFPFLED PLVKVENNMV 351 400 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 SLYKYMFPPH LEKSTLACIG LIQPLGSIFP TVELQARWGT RVFKGLCTLP 401 450 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 SERTMMADII KRNKKRIDLF GESNSQILQT SYIDYLDELA LEIGAKPDLL 451 500 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 SLLLKEPKLA VKLYFGPCNS YQYRLESMAK RVATVGAGVS GLASIKCCLE 501 550 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 EGLEPTCFER SDDLGGLWRF TEHVEEGRAS LYKSVVSNSC KEMSCYPDFP 551 600 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 FPEDYPNYVP NSVFLEYLKM YANQFNLLKC IQFKVFLSTT GGPWVISQVF 601 650 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 DSGYPWDMVF VTTQLREPVL NNELPGRIVT GKVLIKPSVK EMKENSVVFN 651 700 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 NNPKEEPTDI IVFATQYTFA FPFLDETVVK VEDGQASLKK YIFPAHLQKP 701 750 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ---------- bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 TLAVISLIKP LDSMITTGEM QARWAVRVLK GKCMSNSGTY MFSLPYYFGY 751 800 ENSP00000356723/1-558 ---------- ---------- ---------- ---------- ----MAKKVA ENSBTAP00000022185/1-553 ---------- ---------- ---------- ---------- ----MAKRVA ENSTTRP00000008993/1-557 ---------- ---------- ---------- ---------- ----MAKRVA bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ----L----- BACU000672/1-1365 WKFRGLPQLK DERITVKVDF YDKGSLLALS YKEGLLNLSH TEHTMAKRVA 801 850 ENSP00000356723/1-558 VIGAGVSGLS SIKCCVDEDL EPTCFERSDD IGGLWKFTES SKDGMTRVYK ENSBTAP00000022185/1-553 VIGAGVSGLS SIKCCLDEHL EPICFERSND IGGLWKFTET SKDGMTRVYK ENSTTRP00000008993/1-557 VIGAGVSGLS SIKCCLDEDL EPTCFERSND IGGLWKFTET SEDGMTRVYK bmy_13412T0/1-420 ---------- ---------- ---------D IS-------- ---------- BACU000672/1-1365 VIGAGVSGLS SIKCCLDEDL EPTCFERSND IGGLWKFTET SKDGITRVYK 851 900 ENSP00000356723/1-558 SLVTNVCKEM SCYSDFPFHE DYPNFMNHEK FWDYLQEFAE HFDLLKYIQF ENSBTAP00000022185/1-553 SLVTNVCKEM SCYSDFPFQE DYPNFMNHEK FWNYLQEFAE HFDLLKYIQF ENSTTRP00000008993/1-557 SLVTNVCKEM SCYSDFPFQE DYPNFMKQEK FWDYLQEFAE HFDLLKYIRF bmy_13412T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU000672/1-1365 SLVTNVCKEM SCYSDFPFQE DYPNFMKQEK FWDYLQEFAE HFDLLKYIQF 901 950 ENSP00000356723/1-558 KTTVCSITKR PDFSETGQWD VVTETEGKQN RAVFDAVMVC TGHFLNPHLP ENSBTAP00000022185/1-553 KTTVCSITKR PDFSETGQWD VVTETEGRQD RAVFDAVMVC TGHFLNPRLP ENSTTRP00000008993/1-557 RTTVCSVTKR PDFSETGQWD VVTETEGELD RAIFDAVMVC TGHFLNPRLP bmy_13412T0/1-420 ---------- ---------- ---------- ---------- -----DPSVP BACU000672/1-1365 RTTVCSVTKR PDFSETGQWD VVTETEGKLD RAIFDAVMVC TGHFLNPHLP 951 1000 ENSP00000356723/1-558 LEAFPGIHKF KGQILHSQEY KIPEGFQGKR VLVIGLGNTG GDIAVELSRT ENSBTAP00000022185/1-553 LESFPGIHKF KGQILHSQEY KIPAGFQDKR VLVIGLGNTG GDIAVELSRT ENSTTRP00000008993/1-557 LESFPGIHKF KGQILHSQEY KIPTGFQDKR VLVIGLGNTG GDIAVELSRT bmy_13412T0/1-420 ----SGIHKF KGQILHSQEY KIPTGFQDKR VLVIGLGNTG GDIAVELSRT BACU000672/1-1365 LESFPGIHKF KGQILHSQEY KIPTGFQDKR VLVIGLGNTG GDIAVELSRS 1001 1050 ENSP00000356723/1-558 AAQVLLSTRT GTWVLGRSSD WGYPYNMMVT RRCCSFIAQV LPSRFLNWIQ ENSBTAP00000022185/1-553 AAQVLLSTRT GTWVINRSSD GGYPLNMMVT RRHHNFIAQV LPSCILKWIQ ENSTTRP00000008993/1-557 AAQVLLSTRT GTWVVSRSSN GGYPFNMMDT RR-HNFTAQV LPSCVLKWSR bmy_13412T0/1-420 AAQVLLSTRT GTWVISRSSD GGYPYNMMAT RRRHNFTAQV LPSCVLKWSQ BACU000672/1-1365 AAQVLLSTRT GTWVISRSSD GGYPFNMMGT RRRHNFTAQV LPSCVLKWSQ 1051 1100 ENSP00000356723/1-558 ERKLNKRFNH EDYGLSITKG ---KKAKFIV NDELPNCILC GAITMKTSVI ENSBTAP00000022185/1-553 ERHLNKRFDH ANYGLNITKG VLRKKPKKIV NDELPTCILC GTVTIKTSVK ENSTTRP00000008993/1-557 ERGLNKRFDH TNYGLNITKG ---KKPKTIV NDELPTCILC GTVTMKTSVK bmy_13412T0/1-420 ERGLNKRFDH TNYGLNITKG ---KNPKTIV NDELPTCILC GAVTMKTSVK BACU000672/1-1365 ERGLNKRFDH TNYGLNITKG ---KKPKKIV NDELPTCILC GTVTMKTSVK 1101 1150 ENSP00000356723/1-558 EFTETSAVFE DGTVEENIDV VIFTTGYTFS FPFFEEPLKS LCTKKIFLYK ENSBTAP00000022185/1-553 EFTETSAVFE DGTVEENIDV VIFTTGYTYS FPFFEEPLKT LCTKKIFLYK ENSTTRP00000008993/1-557 EFTETSALFE DGTVEENIDV VIFTTGYTFS FPFLEEPLKS LCTKKTFLYK bmy_13412T0/1-420 EFTETSALFE DGTVEENIDV VIFTTGYTFS FPFLEEPLKS LCTKKIFLYK BACU000672/1-1365 EFTETSALFE DGTVEENIDV VIFTTGYTFS FPFLEEPLKS LCTKKIFLYK 1151 1200 ENSP00000356723/1-558 QVFPLNLERA TLAIIGLIGL KGSILSGTEL QARWVTRVFK GLCKIPPSQK ENSBTAP00000022185/1-553 LVFPSNLEKT TLAMIGFISL TGSILAGTEL QARWATRIFK GLCKIPPSQK ENSTTRP00000008993/1-557 LVFPSNLERT TLAMIGFISL TGSILAGTEL QARWATRVFK GLCKIPPSQK bmy_13412T0/1-420 LVFPSNLERT TLAMIGFISL TGSILAGTEL QARWATRVFK GLCKIPSSQK BACU000672/1-1365 LVFPSNLERT TLAMIGFISL TGSILAGTEL QARWATRVFK GLCKIPPSQK 1201 1250 ENSP00000356723/1-558 LMMEATEKEQ LIKRGVFKDT SKDKFDYIAY MDDIAACIGT KPSIPLLFLK ENSBTAP00000022185/1-553 LMAEAMKKEQ LIERGLMKDP GADKIDYISY MDDLASFIGV KPNIPLLFIK ENSTTRP00000008993/1-557 LMAEATKKEQ LIERGLMKDT SGDKLDYISY MDELAACIGT KPNVPLLFLK bmy_13412T0/1-420 LMAEATKKEQ LIERGLMKDT RGDKLDYISY MDDLATCIGT KPNVPLLFLK BACU000672/1-1365 LMAEATKKEQ LIERGLMKDT SGDKLDYISY MDDLAACIGT KPNVPLLFLK 1251 1300 ENSP00000356723/1-558 DPRLAWEVFF GPCTPYQYRL MGPGKWDGAR NAILTQWDRT LKPLKTRIVP ENSBTAP00000022185/1-553 DPRLAWEVFF GPCTPYQYRL MGPGKWDGAR NAILTQWDRT LKPLKTRTIP ENSTTRP00000008993/1-557 DPRLAWEVFF GPCTPYQYRL MGPGKWDGAR NAILTQWDRT LKPLKTRIVP bmy_13412T0/1-420 DPRLAWEVFF GPCTPYQYRL MGPGKWDGAR NAILTQWDRT LKPLRTRIVP BACU000672/1-1365 DPRLAWEVFF GPCTPYQYRL MGPGKWDGAR NAILTQWDRT LKPLKTRIVP 1301 1350 ENSP00000356723/1-558 DSSKPASMSH YLKAWGAPVL LASLLLICKS SLFLKLVRDK LQDR----MS ENSBTAP00000022185/1-553 GSFKPASMSH YLKAWGAPIL LASFLLIYKS SIFLKLVPEK LQDR----LS ENSTTRP00000008993/1-557 DSSKPASMSR YLKAWGAPIL LASLLLICKS SLFLKLVPEK LWDR----IS bmy_13412T0/1-420 NSSKPASMSH YLKAWGAPIL LASLLLICKS SLFFEIGARK TMGQNFSLLN BACU000672/1-1365 DSSKPASVSH YLKAWGAPIL LASLLLICKS SFFFEIGARK TMGQNFSLLN 1351 1400 ENSP00000356723/1-558 PYLVSL---- WRG----- ENSBTAP00000022185/1-553 P--------- -------- ENSTTRP00000008993/1-557 PYLVSI---- WRG----- bmy_13412T0/1-420 KYLARINLLG YEGCTKSY BACU000672/1-1365 KYLARINLLG YEGCTKSY