KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:26 2014 Check: 00 .. Name: ENSP00000312129/1-519 Len: 522 Check: 4754 Weight: 1.00 Name: bmy_21379T0/1-482 Len: 522 Check: 8012 Weight: 1.00 Name: ENSBTAP00000022193/1-506 Len: 522 Check: 1833 Weight: 1.00 Name: ENSTTRP00000012173/1-505 Len: 522 Check: 6722 Weight: 1.00 Name: BACU009703/1-503 Len: 522 Check: 1570 Weight: 1.00 // 1 50 ENSP00000312129/1-519 MPMPSRDGGL HPRHHHYGSH SPWSQLLSSP METPSIKGLY YRRVRKVGAL bmy_21379T0/1-482 --MPSRDRGL HPGHHHLGSC GPLNQFLPRP VEPPCIKGIY YRRARKLGAQ ENSBTAP00000022193/1-506 ISMPSRDRGL HAGHHHFRSC SPLSPFLSGP VEPPSIKGIY YRRARKVGAL ENSTTRP00000012173/1-505 IPMPSRDRGL HPRHHHLGPC GPLSQFLPRP VEPPSIKGIY YRRARKLGAQ BACU009703/1-503 --MPSRDRGL HPGHHHLGSC GPLSQFLPRP AEPPSIKGIY YRRARKLGAQ 51 100 ENSP00000312129/1-519 DASPV-DLKK EILINVGGRR YLLPWSTLDR FPLSRLSKLR LCRSYEEIVQ bmy_21379T0/1-482 DASWTADLKK EMLVNVGGKR YLLPWSTLDE FPLSRLSKLR FCRSHEEIAQ ENSBTAP00000022193/1-506 DASPTADLKK EMLVNVGGRR YLLPWSTLDE FPLSRLSKLR FCRSQEEIAQ ENSTTRP00000012173/1-505 DASWTADLKK EMLVNVGGKR YLLPWSTLDE FPLSRLSKLR FCRSHEEIAQ BACU009703/1-503 DASWTGDLKK EMLVNVGGKR YLLPWSTLDE FPLSRLSKLR FCRTHEEIAQ 101 150 ENSP00000312129/1-519 LCDDYDEDSQ EFFFDRSPSA FGVIVSFLAA GKLVLLQEMC ALSFQEELAY bmy_21379T0/1-482 LCDDYDEGNQ EFFFDRSPSA FGVIVSFLAA GKLVLLQEMC VLSFQEELTY ENSBTAP00000022193/1-506 LCDDYDEDNQ EFFFDRSPSA FGVIVSFLAA GKLVLLREMC VLSFQEELTY ENSTTRP00000012173/1-505 LCDDYDEDNQ EFFFDRSPSA FGVIASFLAA GKLVLLQEMC VLSFQEELTY BACU009703/1-503 LCDDYDEGNQ EFFFDRNPSA FGVIVSFLAA GKLVLLQEMC VLSFQEELTY 151 200 ENSP00000312129/1-519 WGIEEAHLER CCLRKLLRKL EELEELAKLH REDVLRQQRE TRRPASHSSR bmy_21379T0/1-482 WGIEEANLET CCLQTLLRKL DEVTE---LR TEETLQLERL CI-------- ENSBTAP00000022193/1-506 WGIEEANLEK CCLRTLLRKL DDLAE---LR QEEALQRQRE AGRPTVHTSR ENSTTRP00000012173/1-505 WGIEEANLET CCLQTLLRKL DEVAE---LR TEETLQR-RA AGRPTVHTSR BACU009703/1-503 WGIEEANLET CCLQTLLRKL DELAE---LR TEETLQR-RA AGRPAVHTSR 201 250 ENSP00000312129/1-519 WGLCMNRLRE MVENPQSGLP GKVFACLSIL FVATTAVSLC VSTMPDLRA- bmy_21379T0/1-482 WNRYRYHYRS M--------- -------ELL FSVLISPFPT LLPLPSLPCV ENSBTAP00000022193/1-506 WGLFMSRLRE MVENPQSGLP GKVFACLSIL FVATTAVSLC VSTMPDLRA- ENSTTRP00000012173/1-505 WALFMNRLQE MVENPQSGLP GKIFACLSIL FVATMAVSLC VSTMPDLRA- BACU009703/1-503 WALFMNRLRE MVENPQSGLP GKVFACLSIL FVATMAVSLC VSTMPDLRA- 251 300 ENSP00000312129/1-519 -EEDQGECSR KCYYIFIVET ICVAWFSLEF CLRFVQAQDK CQFFQGPLNI bmy_21379T0/1-482 FSPFQGECSQ KCYSIFIVET VCVAWFSLEF CLRFVQAQNK CQFFQGPLNI ENSBTAP00000022193/1-506 -EEDKGECSQ KCYYIFIVET VCVAWFSLEF CLRFVQAQNK CQFFQGPLNI ENSTTRP00000012173/1-505 -EEDKGECSQ KCYYIFIVET VCVAWFSLEF CLRFVQAQNK CQFFQGPLNI BACU009703/1-503 -EEGKGECSR KCYSIFIVET VCVAWFSLEF CLRFVQAQNK CQFFQGPLNI 301 350 ENSP00000312129/1-519 IDILAISPYY VSLAVSEEPP EDGERPSGSS YLEKVGLVLR VLRALRILYV bmy_21379T0/1-482 IDILAISPYY VSLAVSDEPQ EDGARPSRSS YLEKAGLALR VLRALRILYV ENSBTAP00000022193/1-506 IDILAIFPYY VSLAVSDEPQ EDGERPGGSS YLEKVGLALR VLRALRILYL ENSTTRP00000012173/1-505 IDILAISPYY VSLAVSDEPQ GDGERPSRSS YVEKVGLALR VLRALRILYV BACU009703/1-503 IDILAISPYY VSLAVSDEPQ ADGARPSRSS YLEKAGLALR VLRALRILYV 351 400 ENSP00000312129/1-519 MRLARHSLGL QTLGLTVRRC TREFGLLLLF LAVAITLFSP LVYVAEKESG bmy_21379T0/1-482 MRLARHSLGL QTLGLTVRRC TRELGLLLLF LCVAITLFSP LIYVAENESG ENSBTAP00000022193/1-506 MRLARHSLGL QTLGLTVRRC TREFGLLLLF LCVAITLFSP LVYVAENESG ENSTTRP00000012173/1-505 MRLARHSLGL QTLGLTVRRC TREFALLLLF LCVAITLFSP LVYVAENESG BACU009703/1-503 MRLARHSLGL QTLGLTVRRC TRELGLLLLF LCVAITLFAP LVYVAENESG 401 450 ENSP00000312129/1-519 RVLEFTSIPA SYWWAIISMT TVGYGDMVPR SVPGQMVALS SILSGILIMA bmy_21379T0/1-482 RVLEFTSIPA SYWWAVISMT TVGYGDMVPS SVPGQMVALS SILSGILIMA ENSBTAP00000022193/1-506 RVLEFTSIPA SYWWAVISMT TVGYGDMVPS SVPGQMVALS SILSGILIMA ENSTTRP00000012173/1-505 RVLEFTSIPA SYWWAVISMT TVGYGDMVPS SVPGQMVALS GILSGILIMA BACU009703/1-503 RVLEFTSIPA SYWWAVISMT TVGYGDMVPS SVPGQMVALS SILSGILIMA 451 500 ENSP00000312129/1-519 FPATSIFHTF SHSYLELKKE QEQLQARLRH LQNTGPASEC ELLDPHVASE bmy_21379T0/1-482 FPATSIFHIF SHSYLELKKE QERLEARFRR LQNAAT---- -------ASE ENSBTAP00000022193/1-506 FPATSIFHTF SHSYLELKKE QEELQARLRR LQNAAT---- -------ASE ENSTTRP00000012173/1-505 FPATSIFHIF SLSYLELKKQ QEQLEARFRR LRSAAP---- -------ASE BACU009703/1-503 FPATSIFHIF SHSYLELKKE QERLEARFRR LQNAAT---- -------ASE 501 550 ENSP00000312129/1-519 HELMNDVNDL ILEGPALPIM HM bmy_21379T0/1-482 HELLNDVQDL ILEGPALPIA YI ENSBTAP00000022193/1-506 HELLRDVSDL SLEGPALPIA YI ENSTTRP00000012173/1-505 RELLNDVKDL ILEGPALPMA YI BACU009703/1-503 HELLTDVQDL ILEGPALPIA YM