KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:27 2014 Check: 00 .. Name: ENSP00000318406/1-1049 Len: 1068 Check: 3033 Weight: 1.00 Name: ENSBTAP00000022196/1-1047 Len: 1068 Check: 2767 Weight: 1.00 Name: ENSTTRP00000006862/1-1043 Len: 1068 Check: 6785 Weight: 1.00 Name: bmy_08891T0/1-817 Len: 1068 Check: 8794 Weight: 1.00 Name: BACU009660/1-933 Len: 1068 Check: 7869 Weight: 1.00 // 1 50 ENSP00000318406/1-1049 MEKRLGVKPN PASWILS--- -GYYWQTSAK WLRSLYLFYT CFCFSVLWLS ENSBTAP00000022196/1-1047 PEKGLGGEWD PAPSFSTLSP EECWYSGLFT ELESLFLFHF KM---FPFLF ENSTTRP00000006862/1-1043 -MEKLGIKPS RASWILS--- -GFCWQTSVK WLKSLYLFYI CFCFSALWLS bmy_08891T0/1-817 ---------- ---------- ---------- ---------- ---------- BACU009660/1-933 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000318406/1-1049 TDASESRCQQ GKTQFGVGLR SGGENHLWLL EGTPSLQSCW AACCQDSACH ENSBTAP00000022196/1-1047 LDAKESRCQR VKTQFGVGLR SRGENHLRLL EGTPSLQSCW AACCQDSACH ENSTTRP00000006862/1-1043 ADAKESRCQQ AKTQFGVGLR SGGENHLWLL EGTPSLQTCW AACCQDSACH bmy_08891T0/1-817 ---------- ---------- ---------- ---------- ---------- BACU009660/1-933 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000318406/1-1049 VFWWLEGMCI QADCSRPQSC RAFRTHSSNS MLVFLKKFQT ADDLGFLPED ENSBTAP00000022196/1-1047 AFWWLEGMCL QADCSRPQSC QAFRTDSSSS MLVFFKKFQI EDDLDFLPED ENSTTRP00000006862/1-1043 AFWWLEGMCI QADCSRPQSC QAFRTDSSNS VLVFLKKFQT ADDLDFLPED bmy_08891T0/1-817 ---------- ---------- ---------- ---------- ---------- BACU009660/1-933 -------MCI QADCSRPQSC QTFRTDSSNS MLVFLKKFQI SHDLDFLPED 151 200 ENSP00000318406/1-1049 DVPHLLGLGW NWASW-RQSP PRAALRPAVS SSDQQSLIRK LQKRGSPSDV ENSBTAP00000022196/1-1047 DVPHILGLDW SRASWRRESP PQTPLRPTL- SSDQWSLIRK LRKRENPSEE ENSTTRP00000006862/1-1043 DVPHILGLAW SRVSWRRQSP PRTPLRPTLS SSDQQSFITK LRKRESPS-E bmy_08891T0/1-817 ---------- ---------- ---------- ---------- ---------- BACU009660/1-933 DVPHILGLGW SRVSWRRQSP PRAPLRPTLS SSDQQSFIRK LRKRESPSEE 201 250 ENSP00000318406/1-1049 VTPIVTQHSK VNDSNELGGL TTSGSAEVHK AITISSPLTT DLTAELSGGP ENSBTAP00000022196/1-1047 VAAV----TQ PSKTNELGDL NSTGSAEVHS TDTIFNPLTT DLSVKIP-GR ENSTTRP00000006862/1-1043 VATV----TQ PSK-NERGDL NTTSSAEVHN TDTISNPLTT DLTAKIP-GW bmy_08891T0/1-817 ---------- ---------- -------VHN TDTISNPLTT DLTAKIP-GW BACU009660/1-933 VATV----TQ PSKMNERGDL NTTSSAEVHN TDTISNPLTT DLTAKIP-GW 251 300 ENSP00000318406/1-1049 KNVSVQPEIS EGLATTPSTQ QVKSSEKTQI AVPQPVAPSY SYATPTPQAS ENSBTAP00000022196/1-1047 SDVSVQREAS EDPGATPSIQ QVKSPEKVQI AHPLPVAPSY SYATPTPQAS ENSTTRP00000006862/1-1043 SNVSVQPEAS EDPGATPSIQ QVTVPGKILI ATPLPVAPSY SYATPTPQAS bmy_08891T0/1-817 SNVSVQPEAS EDPGATPSIQ QVKIPGKISI ATPLPVAPSY SYATPTPQAS BACU009660/1-933 SNVPVQPEAS EDPGATPSIQ QVKIPGKISI ATPLPLAPSY SYATPTPQAS 301 350 ENSP00000318406/1-1049 FQSTSAPYPV IKELVVSAGE SVQITLPKNE VQLNAYVLQE PPKGETYTYD ENSBTAP00000022196/1-1047 FQSTSTPLPV IKELVVSAGN SVQITLPKNE VQLNAFVLPE PDAGEAYTYD ENSTTRP00000006862/1-1043 FQSTSAPYPV IKELVVSAGN SVQITLPKNE VQLNAYVLQD PDAGETYTYD bmy_08891T0/1-817 FQSTSAPYPV IKELVVSAGN SVQITLPKNE VQLNAYVLQE PDAGETYTYD BACU009660/1-933 FQSTSAPYPV IKELVVSAGN SVQITLPKNE VQLNAYVLQE PDAGETYTYD 351 400 ENSP00000318406/1-1049 WQLITHPRDY SGEMEGKHSQ ILKLSKLTPG LYEFKVIVEG QNAHGEGYVN ENSBTAP00000022196/1-1047 WQLITHPRDY SGEMEGEHSK ILKLSKLTPG LYEFKVIVDG QNAHGEGYVN ENSTTRP00000006862/1-1043 WQLITHPKDY SGEMEGKHSQ ILKLSKLTPG LYEFKVIVDG QNAHGEGYVN bmy_08891T0/1-817 WQLITHPKDY SGEMEGKHSQ ILKLSKLTPG LYEFKVIVDG QNAHGEGYVN BACU009660/1-933 WQLITHPKDY SGEMEGKHSQ ILKLSKLTPG LYEFKVIVDG QNAHGEGYVN 401 450 ENSP00000318406/1-1049 VTVKPEPRKN RPPIAIVSPQ FQEISLPTTS TVIDGS--QS TDDDKIVQYH ENSBTAP00000022196/1-1047 VTVKPEPRKN RPPVAIVSPQ YQEISLPTTS TVIDGSHQES TDDDKIVQYH ENSTTRP00000006862/1-1043 VTVKPEPRKN RPPVAIVSPQ FQEISLPTTS TVIDGS--QS TDDDKIVQYH bmy_08891T0/1-817 VTVKPEPRKN RPPVAIVSPQ FQEISLPTTS TVIDGS--QS TDDDKIVQYH BACU009660/1-933 VTVKPEPRKN RPPVAIVSPQ FQEISLPTTS TVIDGS--QS TDDDKIVQYH 451 500 ENSP00000318406/1-1049 WEELKGPLRE EKISEDTAIL KLSKLVPGNY TFSLTVVDSD GATNSTTANL ENSBTAP00000022196/1-1047 WEELKGPLRE KKISEDTAIL KLSKLVPGNY TFSLTVVDSD GATNSTTARL ENSTTRP00000006862/1-1043 WEELKGPLRE EKISEDTAIL KLSKLVPGNY TFSLTVVDSD GATNSTTASL bmy_08891T0/1-817 WEELKGPLRE EKISEDTAIL KLSKLVPGNY TFSLTVVDSD GATNSTTASL BACU009660/1-933 WEELKGPLRE EKISEDTAIL KLSKLVPGNY TFSLTVVDSD GATNSTTASL 501 550 ENSP00000318406/1-1049 TVNKAVDYPP VANAGPNQVI TLPQNSITLF GNQSTDDHGI TSYEWSLSPS ENSBTAP00000022196/1-1047 TVNKAVDYPP VANAGPNQVI TLPQNSITLF GNQSTDDHGI TSYEWSLSPN ENSTTRP00000006862/1-1043 TVNKAVDYPP VANAGPNQVI TLPQNSITLF GNQSTDDHGI TSYEWSLSPN bmy_08891T0/1-817 TVNKAVDYPP VANAGPNQVI TLPQNSITLF GNQSTDDHGI TSYEWSLSPN BACU009660/1-933 TVNKAVDYPP VANAGPNQVI TLPQNSITLF GNQSTDDHGI TSYEWSLSPN 551 600 ENSP00000318406/1-1049 SKGKVVEMQG VRTPTLQLSA MQEGDYTYQL TVTDTIGQQA TAQVTVIVQP ENSBTAP00000022196/1-1047 SKGKVMEMQG VRTPTLQLSA MQEGDYTYQL TVTDTVGQQA TAQVTVIVQP ENSTTRP00000006862/1-1043 SKGKVMEMQG VRTPTLQLSA MQEGDYTYQL TVTDTIGQQA TAQVTVIVQP bmy_08891T0/1-817 SKGKVMEMQG VRTPTLQLSA MQEGDYTYQL TVTDTIGQQA TXQVTVIVQP BACU009660/1-933 SKGKVMEMQG VRTPTLQLSA MQEGDYTYQL TVTDTIGQQA TAQVTVIVQP 601 650 ENSP00000318406/1-1049 ENNKPPQADA GPDKELTLPV DSTTLDGSKS SDDQKIISYL WEKTQGPDGV ENSBTAP00000022196/1-1047 ENNKPPQADA GPDKELTLPV DSTTLDGSKS SDDQKIISYL WEKTQGPDGV ENSTTRP00000006862/1-1043 ENNKPPQADA GPDKELTLPM DSTTLDGSKS SDDQKITSYL WEKTQGPDGV bmy_08891T0/1-817 ENNKPPQADA GPDKELTLPM DSTTLDGSRS SDDQKIISYL WEKTQGPDGV BACU009660/1-933 ENNKPPQADA GPDKELTLPM DSTTLDGSKS SDDQKIISYL WEKTQGPDGV 651 700 ENSP00000318406/1-1049 QLENANSSVA TVTGLQVGTY VFTLTVKDER NLQSQSSVNV IVKEEINKPP ENSBTAP00000022196/1-1047 QLENANSSVA TVTGLQVGTY VFTLTVKDER NLQSQSSVNV IVKEEMNKAP ENSTTRP00000006862/1-1043 QLENANSSVA TVTGLQVGTY VFTLTVKDER NLQSQNSD-- -VVEEMNKPP bmy_08891T0/1-817 QLENANSSVA TVTGLQVGTY VFTLTVKDER NLQSQSSVNV IVKEEMNKPP BACU009660/1-933 QLENANSSVA TVTGLQVGTY VFTLTVKDER NLQSQSSVNV IVKEEMNKPP 701 750 ENSP00000318406/1-1049 IAKITGNVVI TLPTSTAELD GSKSSDDKGI VSYLWTRDEG SPAAGEVLNH ENSBTAP00000022196/1-1047 VAKIAGNVVI TLPTDTAELD GSKSSDDKGI VSYLWTRDEG SPAAGEVLNR ENSTTRP00000006862/1-1043 IAKITGNVVI TLPTDTAELD GSKSSDDKGI VSYLWTRDEG SPAAGEVLNH bmy_08891T0/1-817 IAKITGNVVI TLPTDTAELD GSKSSDDKGI VNYLWTRDEG SPAAGEVLNH BACU009660/1-933 TAKITGNVVI TLPTDTAELD GSKSSDDKGI VNYLWTRDEG SPAAGEVLNH 751 800 ENSP00000318406/1-1049 SDHHPILFLS NLVEGTYTFH LKVTDAKGES DTDRTTVEVK PDPRKNNLVE ENSBTAP00000022196/1-1047 SDHHPVLFLS NLVEGTYTFH LKVTDAKGES DVDRTTVEVK PDPRKNSLVE ENSTTRP00000006862/1-1043 SDHRPVLFLS NLVEGTYAFH LKVTDAKGES DTDRTTVEVK PDPRKNNLVE bmy_08891T0/1-817 SDHHPVLFLS NLVEGTYTFH LKVTDAKGES DTDRTTVEVK PDPRKNNLVE BACU009660/1-933 SDHHPVLFLS NLVEGTYTFH LKVTDAKGES DTDRTTVEVK PDPRKNNLVE 801 850 ENSP00000318406/1-1049 IILDINVSQL TERLKGMFIR QIGVLLGVLD SDIIVQKIQP YTEQSTKMVF ENSBTAP00000022196/1-1047 LILDVNVSQL TERLKGMFIR QIGVLLGVLD SDIIVQKIQP YTEQSTKMVF ENSTTRP00000006862/1-1043 IILDVNVSQL TERLKGMFIR QIGVLLGVLD SDIIVQKIQP YTEQSTKMVF bmy_08891T0/1-817 IILDVNVSQL TERLKGMFIR QIGVLLGVLD SDIIVQKIQL YTEQSTKMVF BACU009660/1-933 IILDVNVSQL TERLKGMFIR QIGVLLGVLD SDIIVQKIQP YTEQSTKMVF 851 900 ENSP00000318406/1-1049 FVQNEPPHQI FKGHEVAAML KSELRKQKAD FLIFRALEVN TVTCQLNCSD ENSBTAP00000022196/1-1047 FVQNEPPHQI FKGHEVAAML KSELQKQKAD FLIFRALEIS TVTCQLNCSD ENSTTRP00000006862/1-1043 FVQNEPPHQI FKGHEVAVML KSELRKQKAD FLIFRALEIN TVTCQLNCSD bmy_08891T0/1-817 FVQNEPPHQI FKGHEVAVML KSELRKQKAD FLIFRALEIN TVTCQLNCSD BACU009660/1-933 FVQNEPPHQI FKGHEVAVML KSELRKQKAD FLIFRALEIN TVTCQLNCSD 901 950 ENSP00000318406/1-1049 HGHCDSFTKR CICDPFWMEN FIKVQLRDGD SNCE------ ---WSVLYVI ENSBTAP00000022196/1-1047 HGHCDSFTKR CVCDPFWMEN FIKVQLRDGD SNCE------ ---WSVLYVI ENSTTRP00000006862/1-1043 HGHCDSFTKR CICDPFWMEN FIKVQLRDGD SNCALNILFL LAEWSVLYVI bmy_08891T0/1-817 HGHCDSFTKR CXCDPFWMEN FIKVQLRDGD SNCG-----E FSAWNC---- BACU009660/1-933 HGHCDSFTKR CICDPFWMEN FIKVQLRDGD SNCG-----E FSAWNC---- 951 1000 ENSP00000318406/1-1049 IATFVIVVAL GILSWTVICC CKR---QKGK PKRKSKYKIL DATDQESLEL ENSBTAP00000022196/1-1047 IASFLIVVAL GILSWTVICC CKR---QKGK PKRKSKYKIL DATDQESLEL ENSTTRP00000006862/1-1043 IASFVIVVAL GILSWTVICC CKR---QKGK PKRKSKYRIL DATDQESLEL bmy_08891T0/1-817 ---------- --ASWFGVEC GSELSGQKGK PKRKSKYRIL DATDQESLEL BACU009660/1-933 ---------- --ASWFGVEC GSELSGQKGK PKRKSKYRIL DATDQESLEL 1001 1050 ENSP00000318406/1-1049 KPTSRAGIKQ KGLLLSSSLM HSESELDSDD AIFTWPDREK GKLLHGQNGS ENSBTAP00000022196/1-1047 KPTSRAGVKQ KGPALSSSLM HSESELDSDD AIFTWPDREK GKLLHGQNGS ENSTTRP00000006862/1-1043 KPTSRAGVRH KGPVLSSSLM HSESELDSDD AIFTWPDREK GKLLHGQNGS bmy_08891T0/1-817 KPTSRAGVKH KGPMLSSSLM HSESELDSDD AIFTWPDREK GKLLHGQNGS BACU009660/1-933 KPTSRAGVKH KGPMLSSSLM HSESELDSDD AIFTWPDREK GKLLHGQNGS 1051 1100 ENSP00000318406/1-1049 VPNGQTPLKA RSPREEIL ENSBTAP00000022196/1-1047 VPNGQTPLKV RSPREEIL ENSTTRP00000006862/1-1043 VPNGQT--RA R-PREE-- bmy_08891T0/1-817 VPNGHTPLKA RSPREEIL BACU009660/1-933 VPNGQTPLKA RSPREEIL