KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:27 2014 Check: 00 .. Name: ENSP00000289707/1-285 Len: 528 Check: 9128 Weight: 1.00 Name: ENSBTAP00000022199/1-280 Len: 528 Check: 139 Weight: 1.00 Name: ENSTTRP00000001699/1-283 Len: 528 Check: 1061 Weight: 1.00 Name: bmy_06299T0/1-272 Len: 528 Check: 4528 Weight: 1.00 Name: BACU003889/1-500 Len: 528 Check: 5620 Weight: 1.00 // 1 50 ENSP00000289707/1-285 ---------- ---------- ---MVMRPL- --WS------ ---------- ENSBTAP00000022199/1-280 ---------- ---------- ---MAVWSL- --WS------ ---------- ENSTTRP00000001699/1-283 ---------- ---------- ---MAVWSL- --WS------ ---------- bmy_06299T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU003889/1-500 MLGKEERSTV PGQPASVHGN SNSEQQWPVQ LHWTGDIHPI CGQMNLKDCH 51 100 ENSP00000289707/1-285 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022199/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001699/1-283 ---------- ---------- ---------- ---------- ---------- bmy_06299T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU003889/1-500 GSSPSCGAPP LRSSFYLSGD TLRNHVTPLG GAVSFLFPVT SEQDAGNHAC 101 150 ENSP00000289707/1-285 ---------- ---------- ---------- --LLLW---- ---------- ENSBTAP00000022199/1-280 ---------- ---------- ---------- --LLLW---- ---------- ENSTTRP00000001699/1-283 ---------- ---------- ---------- --LLLW---- ---------- bmy_06299T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU003889/1-500 EAENSVSKET SKPETLSVEG PRVLSAPTSI NWLVPWLPAS LLGMTVIAAA 151 200 ENSP00000289707/1-285 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022199/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001699/1-283 ---------- ---------- ---------- ---------- ---------- bmy_06299T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU003889/1-500 LLGYFRPWRK TVLSLDFMKA GQSCFKVYLC SGRKMEPGPE LDEEAAGVGD 201 250 ENSP00000289707/1-285 ---------- ---------- --------EA LLPITVTGAQ VLSKVGGSVL ENSBTAP00000022199/1-280 ---------- ---------- --------EA LLPMVIASAQ VQGQVGGSAL ENSTTRP00000001699/1-283 ---------- ---------- --------EA LLPFIVTGAQ VQGQVGGSAL bmy_06299T0/1-272 ---------- ---------- ---------- LLPFVVTSAQ VQGQVGGSAL BACU003889/1-500 HELKIFHCQN ENDEGVIYSV VRTIPKESEA LLPFVVTGAQ VQGQVGGSAL 251 300 ENSP00000289707/1-285 LVAARPPGFQ VREAIWRSLW PSEELLATFF RGSLETLYHS RFLGRAQLHS ENSBTAP00000022199/1-280 LVADHPPGFQ VREAIWRSLW PSEELLATFF RGSPETLYHS RFLGRAQLHT ENSTTRP00000001699/1-283 LVAERPPGFQ IREAIWRSLW PSEELLATFF RGSLETLYHS RFLGRAQLHS bmy_06299T0/1-272 LVAERPPGFQ IRDAIWRSLW PSEELLATFF RGSLETLYHS RFLGRAQLHG BACU003889/1-500 LVAERPPGFQ IREAIWRSLW PSEELLATFF RGSLETLYHS RFLGRAQLHG 301 350 ENSP00000289707/1-285 NLSLELGPLE SGDSGNFSVL MVDTRGQPWT QTLQLKVYDA VPRPVVQVFI ENSBTAP00000022199/1-280 NLSLELRPLE SGDSGNFSVL LVDKQGRART QTLQLKVYDA VPRPVVKVFI ENSTTRP00000001699/1-283 NLSLELRPLK SGDSGNFSVL LVDKEGRAWT QTLQLKVYGA VPRPVVQVFT bmy_06299T0/1-272 NLSLELRPLE SGDSGNFSVL LVDKEGRAWT QTLQLKVYDA VPRPEVQVFI BACU003889/1-500 NLSLELRPLE SGDSGNFSVL LVDKEGRAWT QTLQLKVYDA VPRPEVQVFI 351 400 ENSP00000289707/1-285 AVERDAQPSK TCQVFLSCWA PNISEITYSW RRETTMDFGM EPHSLFTDGQ ENSBTAP00000022199/1-280 AVSGDAQPPK TCHVFLSCRA PNTSDITYSW RREGTVDLDM EPAGLFTDGQ ENSTTRP00000001699/1-283 AVSGDAQPPK TCQVFLSCWA PNISDITYSW RREGTIDLDT KPGGLFMDGQ bmy_06299T0/1-272 AVSGDAQPPK TCQVFLSCWA PNISDITYSW RREGTIDLDI KPGGLFMDGQ BACU003889/1-500 AVSGDAQPPK TCQVFLSCWA PNISDITYSW RREGTIDLDI KPGGLFMDGH 401 450 ENSP00000289707/1-285 VLSISLGPGD RDVAYSCIVS NPVSWDLATV TPWDSCHHEA ---------- ENSBTAP00000022199/1-280 VLSVSLGPGD KGVAYSCIVS NPVSWDLATV TPWESCHRQA ---------- ENSTTRP00000001699/1-283 VLSVSLGPGD KGVAYSCIVS NPVSWDLATV TPWESCHHQA ---------- bmy_06299T0/1-272 VLSVSLGPGD KGVAYSCIIS NPVSWDLATV TPWESCHRQA GMPRAGDQWL BACU003889/1-500 VLSVSLGPGD KGVAYSCIVS NPVSWDLATV TPWESCHRQA ---------- 451 500 ENSP00000289707/1-285 ---------- -------APG KASYKDVLLV VVPVSLLLML VTLFSAWHWC ENSBTAP00000022199/1-280 ---------- -------APG RASYKDVLLV VVPVSLLLIL AGL-SAWHWG ENSTTRP00000001699/1-283 ---------- -------APG MASYKDVLLV VVPVLLLVIL AGL-SAWHWG bmy_06299T0/1-272 RDGEACSPPV TPPPPCPAPG MASYKDVLLV VVPVLLLLIL AGL-SAWHWG BACU003889/1-500 ---------- -------APG MASYKDVLLV VVPVLLFLIL AGL-SAWHWG 501 550 ENSP00000289707/1-285 PCSGKKKKDV HADRVGPETE NPLVQDLP ENSBTAP00000022199/1-280 PWSGKKKKDV CADEVDQETE SPLV---- ENSTTRP00000001699/1-283 PCSGTKKKDV GAGEVAPETE NPLV-GLP bmy_06299T0/1-272 PCS------- ---------- -------- BACU003889/1-500 PCSGKKKKDV CADEVAPETE NPLVQGLP