KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:28 2014 Check: 00 .. Name: ENSP00000356405/1-531 Len: 537 Check: 4914 Weight: 1.00 Name: ENSBTAP00000022205/1-531 Len: 537 Check: 4914 Weight: 1.00 Name: ENSTTRP00000008818/1-530 Len: 537 Check: 3660 Weight: 1.00 Name: bmy_09065T0/1-348 Len: 537 Check: 1776 Weight: 1.00 Name: BACU014454/1-382 Len: 537 Check: 3019 Weight: 1.00 // 1 50 ENSP00000356405/1-531 MADVLSVLRQ YNIQKKEIVV KGDEVIFGEF SWPKNVKTNY VVWGTGKEGQ ENSBTAP00000022205/1-531 MADVLSVLRQ YNIQKKEIVV KGDEVIFGEF SWPKNVKTNY VVWGTGKEGQ ENSTTRP00000008818/1-530 MADVLSVLRQ YNIQKKEIVV KGDEVIFGEF SWPKNVKTNY VVWGTGKEGQ bmy_09065T0/1-348 MADVLSVLRQ YNIQKKEIVV KGDEVIFGEF SWPKNVKTNY VVWGTGKEGQ BACU014454/1-382 MADVLSVLRQ YNIQKKEIVV KGDEVIFGEF SWPKNVKTNY VVWGTGKEGQ 51 100 ENSP00000356405/1-531 PREYYTLDSI LFLLNNVHLS HPVYVRRAAT ENIPVVRRPD RKDLLGYLNG ENSBTAP00000022205/1-531 PREYYTLDSI LFLLNNVHLS HPVYVRRAAT ENIPVVRRPD RKDLLGYLNG ENSTTRP00000008818/1-530 PREYYTLDSI LFLLNNVHLS HPVYVRRAAT ENIPVVRRPD RKDLLGYLNG bmy_09065T0/1-348 PREYYTLDSI LFLLNNVHLS HPVYVRRAAT ENIPVVRRPD RKDLLGYLNG BACU014454/1-382 PREYYTLDSI LFLLNNVHLS HPVYVRRAAT ENIPVVRRPD RKDLLGYLNG 101 150 ENSP00000356405/1-531 EASTSASIDR SAPLEIGLQR STQVKRAADE VLAEAKKPRI EDEECVRLDK ENSBTAP00000022205/1-531 EASTSASIDR SAPLEIGLQR STQVKRAADE VLAEAKKPRI EDEECVRLDK ENSTTRP00000008818/1-530 EASTSASIDR SAPLEIGLQR STQVKRAADE VLAEAKKPRI EDEECVRLDK bmy_09065T0/1-348 EASTSASIDR SAPLEIGLQR STQVKRAADE VLAEAKKPRI EDEECVRLDK BACU014454/1-382 EASTSASIDR SAPLEIGLQR STQVKRAADE VLAEAKKPRI EDEECVRLDK 151 200 ENSP00000356405/1-531 ERLAARLEGH KEGIVQTEQI RSLSEAMSVE KIAAIKAKIM AKKRSTIKTD ENSBTAP00000022205/1-531 ERLAARLEGH KEGIVQTEQI RSLSEAMSVE KIAAIKAKIM AKKRSTIKTD ENSTTRP00000008818/1-530 ERLAARLEGH KEGIVQTEQI RSLSEAMSVE KIAAIKAKIM AKKRSTIKTD bmy_09065T0/1-348 ERLAARLEGH KEGIVQTEQI RSLSEAMSVE KIAAIKAKIM AKKRSTIKTD BACU014454/1-382 ERLAARLEGH KEGIVQTEQI RSLSEAMSVE KIAAIKAKIM AKKRSTIKTD 201 250 ENSP00000356405/1-531 LDDDITALKQ RSFVDAEVDV TRDIVSRERV WRTRTTILQS TGKNFSKNIF ENSBTAP00000022205/1-531 LDDDITALKQ RSFVDAEVDV TRDIVSRERV WRTRTTILQS TGKNFSKNIF ENSTTRP00000008818/1-530 LDDDITALKQ RSFVDAEVDV TRDIVSRERV WRTRTTILQS TGKNFSKNIF bmy_09065T0/1-348 LDDDITALKQ RSFVDAEVDV TRDIVSRERV WRTRTTILQS TGKNFSKNIF BACU014454/1-382 LDDDITALKQ RSFVDAEVDV TRDIVSRERV WRTRTTILQS TGKNFSKNIF 251 300 ENSP00000356405/1-531 AILQSVKARE EGRAPEQRPA PNAAPVDPTL RTKQPIPAAY NRYDQERFKG ENSBTAP00000022205/1-531 AILQSVKARE EGRAPEQRPA PNAAPVDPTL RTKQPIPAAY NRYDQERFKG ENSTTRP00000008818/1-530 AILQSVKARE EGRAPEQRPA PNAAPVDPTL RTKQPIPAAY NRYDQERFKG bmy_09065T0/1-348 AILQSVKARE EGRAPEQRPA PNAAPVDPTL RTKQPIPAAY NRYDQERFKG BACU014454/1-382 AILQSVKARE EGRAPEQRPA PNAAPVDPTL RTKQPIPAAY NRYDQERFKG 301 350 ENSP00000356405/1-531 KE------ET EGFKIDTMGT YHGMTLKSVT EGASARKTQT PAAQPVPRPV ENSBTAP00000022205/1-531 KE------ET EGFKIDTMGT YHGMTLKSVT EGASARKTQT PAAQPVPRPV ENSTTRP00000008818/1-530 KE------ET EGFKIDTMGT YHGMTLKSVT EGASARKTQT PAAQPVPRPV bmy_09065T0/1-348 KEGKLLNFET EGFKIDTMGT YHGMTLKSVT ---------- ---------- BACU014454/1-382 KEGKLLNFET EGFKIDTMGT YHGMTLKSVT ---------- ---------- 351 400 ENSP00000356405/1-531 SQARPPPNQK KGSRTPIIII PAATTSLITM LNAKDLLQDL KFVPSDEKKK ENSBTAP00000022205/1-531 SQARPPPNQK KGSRTPIIII PAATTSLITM LNAKDLLQDL KFVPSDEKKK ENSTTRP00000008818/1-530 SQARPPPNQK KGSRTPIIII PAATTSLITM LNAKDLLQDL KFVPSDEKKK bmy_09065T0/1-348 ---------- ---------- ---------- ---------I -AV------- BACU014454/1-382 ---------- ---------- ---------- ---------V FFL------- 401 450 ENSP00000356405/1-531 QGCQRENETL IQRRKDQMQP GGTAISVTVP YRVVDQPLKL MPQDWDRVVA ENSBTAP00000022205/1-531 QGCQRENETL IQRRKDQMQP GGTAISVTVP YRVVDQPLKL MPQDWDRVVA ENSTTRP00000008818/1-530 QGCQRENETL IQRRKDQMQP GGTAISVTVP YRVVDQPLKL MPQDWDRVVA bmy_09065T0/1-348 ---------- ---------- ----VDVMLQ VAYLTQPNT- ---------- BACU014454/1-382 ---------- ---------- ----MDVSFS FVLLVSPASH VPLRENDSGL 451 500 ENSP00000356405/1-531 VFVQGPAWQF KGWPWLLPDG SPVDIFAKIK AFHLKYDEVR LDPNVQKWDV ENSBTAP00000022205/1-531 VFVQGPAWQF KGWPWLLPDG SPVDIFAKIK AFHLKYDEVR LDPNVQKWDV ENSTTRP00000008818/1-530 VFVQRPAWQF KGWP-LLPDG SPVDIFAKIK AFHLKYDEVR LDPNVQKWDV bmy_09065T0/1-348 ---------- ---------- ---------- ---------- ---------- BACU014454/1-382 ARIVYVHLQL PSFPPLSPT- ---------- ---------- ---------- 501 550 ENSP00000356405/1-531 TVLELSYHKR HLDRPVFLRF WETLDRYMVK HKSHLRF ENSBTAP00000022205/1-531 TVLELSYHKR HLDRPVFLRF WETLDRYMVK HKSHLRF ENSTTRP00000008818/1-530 TVLELSYHKR HLDRPVFLRF WETLDRYMVK HKSHLRF bmy_09065T0/1-348 ---------- ---------- ---------- ------- BACU014454/1-382 ---------- ---------- ---------- ----LFF