KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:16:28 2014 Check: 00 .. Name: ENSP00000311833/1-505 Len: 506 Check: 9999 Weight: 1.00 Name: ENSBTAP00000022208/1-491 Len: 506 Check: 6436 Weight: 1.00 Name: bmy_08517T0/1-443 Len: 506 Check: 431 Weight: 1.00 Name: ENSTTRP00000012583/1-503 Len: 506 Check: 8398 Weight: 1.00 // 1 50 ENSP00000311833/1-505 MRSSLAPGVW FFRAFSRDSW FRGLILLLTF LIYACYHMSR KPISIVKSRL ENSBTAP00000022208/1-491 MRSSLAPGI- ---------W YRAFILLITF LIYTCYHMSR KPISVVKSRL bmy_08517T0/1-443 ---------- ---------- ---------- -------MSR KPISVVKSRL ENSTTRP00000012583/1-503 MRSSLAPGVW FLRAFSRDSW YRGFILITFI Y---CYHMSR KPISVVKSRL 51 100 ENSP00000311833/1-505 HQNCSEQIKP INDTHSLNDT MWCSWAPFDK DNYKELLGGV DNAFLIAYAI ENSBTAP00000022208/1-491 HHNCSEVIQP VNSTHSLNDT TWCNWAPFDK SNYKELLGAV DNAFLVAYAI bmy_08517T0/1-443 HRNCSGMIQP INDTHSLNDT TWCNWAPFDQ SNYKELLGAV DNAFLVAYAV ENSTTRP00000012583/1-503 HHNCSEMIQP IGDTHRLNDT TWCNWAPFDQ SNYKELLGAV DNAFLVAYAI 101 150 ENSP00000311833/1-505 GMFISGVFGE RLPLRYYLSA GMLLSGLFTS LFGLGYFWNI HELWYFVVIQ ENSBTAP00000022208/1-491 GMFISGIFGE RLPLRYYLTA GMLLSGLFTS LFGLGYFWNI HVLWYFVLVQ bmy_08517T0/1-443 GMFISGIFGE RLPLRYYLTA GMLLSGLFTS LLGLGYFWNI HALWYFVLIQ ENSTTRP00000012583/1-503 GMFISGIFGE RLPLRYYLTA GMLLSGLFTS LFGLGYFWNI HALWYFVLIQ 151 200 ENSP00000311833/1-505 VCNGLVQTTG WPSVVTCVGN WFGKGKRGFI MGIWNSHTSV GNILGSLIAG ENSBTAP00000022208/1-491 IFNGLVQTTG WPAVVSCVGN WFGKGKRGLI MGIWNSHTSV GNILGSLLAG bmy_08517T0/1-443 ICNGLVQTTG WPSVVTCVGN WFGKGKRGLI MGIWNSHTSV GNILGSLIAG ENSTTRP00000012583/1-503 ICNGLVQTTG WPSVVTCVGN WFGKGKRGLI MGIWNSHTSV GNILGSLIAG 201 250 ENSP00000311833/1-505 IWVNGQWGLS FIVPGIITAV MGVITFLFLI EHPEDVDCAP PQHHGEPAEN ENSBTAP00000022208/1-491 VWVDQQWGLS FVVPGVITAI MGIITFFFLI EYPEDVDCSP PQHHGNPEES bmy_08517T0/1-443 IWVDEQWGLS FVVPGVITAI MGLITFFFFI EYPEDVGCSP PQHHGGLEEN ENSTTRP00000012583/1-503 VWVDEQWGLS FVVPGIITAV MGLVTFFFLI EYPEDVDCSP PQHHGELEEN 251 300 ENSP00000311833/1-505 QDNPEDPGNS PCSIRESGLE TVAKCSKGPC EEPAAISFFG ALRIPGVVEF ENSBTAP00000022208/1-491 QDQPEDPANG PSCNKESSLE SAVTCSKEAS AQPSAISFFG ALRIPGVVEF bmy_08517T0/1-443 VDDAEDPGSG PHSNRENGLE SAVTSSKEPS AQPAAISFSG ALWIPGVVEF ENSTTRP00000012583/1-503 GDNAEDPGNG PHSNRGNGRE SAVTLSKEPS AQPAAISFFG ALWIPGVVEF 301 350 ENSP00000311833/1-505 SLCLLFAKLV SYTFLYWLPL YIANVAHFSA KEAGDLSTLF DVGGIIGGIV ENSBTAP00000022208/1-491 SLCLLFAKLV SYTFLYWLPL YISNVVHFTA KEAGDLSTLF DVGGIIGGIL bmy_08517T0/1-443 SLCLLFAKLV SYTFLYWLPL YIFNV----- ---------- ------GGIL ENSTTRP00000012583/1-503 SLCLLFAKLV SYTFLYWLPL YIFNVVHFTA KESGDLSTLF DVGGIAGGIL 351 400 ENSP00000311833/1-505 AGLVSDYTNG RATTCCVMLI LAAPMMFLYN YIGQDGIASS IVMLIICGGL ENSBTAP00000022208/1-491 AGLVSDYING RATTCCVMLI LAAPMMFLYN HVGQRGIGIS IVMLLICGAL bmy_08517T0/1-443 AGLISDYTNG RATTCCAMLI LAAPMMFLYN YVGQSGISIS IVMLLICGAL ENSTTRP00000012583/1-503 AGLISDYTNG RATTCCVMLI LAAPTMFLYN YVGQSGISIS IVMLLTCGAL 401 450 ENSP00000311833/1-505 VNGPYALITT AVSADLGTHK SLKGNAKALS TVTAIIDGTG SIGAALGPLL ENSBTAP00000022208/1-491 VNGPYALITT AVSADLGTHK SLKGNAKALS TVTAIIDGTG SIGAALGPLL bmy_08517T0/1-443 VNGPYALITT AVSADLGTHK SLKGNAKALS TVTAIIDGTG SIGAALGPLL ENSTTRP00000012583/1-503 VNGPYALITT AVSADLGTHK SLKGNAKALS TVTAIIDGTG SIGAALGPLL 451 500 ENSP00000311833/1-505 AGLISPTGWN NVFYMLISAD VLACLLLCRL VYKEILAWKV SLSRGSGSSM ENSBTAP00000022208/1-491 AGLISPTGWN NVFYMLIAAD VLACLLLCRL VYKEILAWKS SLSKDRGYRE bmy_08517T0/1-443 AGLISPTGWN NVFYMLITAD ILACLLLCRL VYKEILAWKA SLSRDRGYRE ENSTTRP00000012583/1-503 AGLISPTGWN NVFYMLITAD ILACLLLCRL VYKEILGWRS SLSRDRGSSV 501 550 ENSP00000311833/1-505 VLTHQ- ENSBTAP00000022208/1-491 M----- bmy_08517T0/1-443 M----- ENSTTRP00000012583/1-503 ALTHAR