KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:33 2014 Check: 00 .. Name: ENSP00000367229/1-757 Len: 768 Check: 6120 Weight: 1.00 Name: ENSBTAP00000022223/1-750 Len: 768 Check: 5366 Weight: 1.00 Name: BACU013723/1-558 Len: 768 Check: 3645 Weight: 1.00 Name: ENSTTRP00000007836/1-753 Len: 768 Check: 8180 Weight: 1.00 Name: bmy_01566T0/1-721 Len: 768 Check: 7730 Weight: 1.00 // 1 50 ENSP00000367229/1-757 MALGEEKAEA EASEDTKAQS YGRGSCRERE LDIPGPMSGE QPPRLEAEGG ENSBTAP00000022223/1-750 MALGAEKAEG EASSDTKAPS CGSWSRGEQE LIPVGPVLGE QPPRLEAEGG BACU013723/1-558 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007836/1-753 MALGEEKAEA AA--AAKAPC PGGGSCPYQE LDPAGPARGE QPPHLQAE-G bmy_01566T0/1-721 MALGEEKAEA AA--DAKAPC PGGWSCPEQE LDPAGPAHGE QPPHLEAEGG 51 100 ENSP00000367229/1-757 LISPVWGAEG IPAPTCWIGT DPGGPSRAHQ PQASDANREP VAERSEPALS ENSBTAP00000022223/1-750 PASPVEGTEG LPGPACYGGV GP-GPSRACQ PPASGASREP AAGGSKPAFG BACU013723/1-558 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007836/1-753 PASPVRGAQG LPAPACHGGT GP-GPSGACQ PQASGASREP AAGGSKPALS bmy_01566T0/1-721 PASPVGGAQG LPA--CHGGA GP-SPSGACQ LQANGASREL AVGGSKPALS 101 150 ENSP00000367229/1-757 G-LPPATMGS GDLLLSGESQ VEKTKLSSSE EFPQTLSLPR TTTICSGHDA ENSBTAP00000022223/1-750 C-VPSAGLET GD-LPSAGSQ MEETRLPAPE ALPQTHAIPR AAALCLGHDA BACU013723/1-558 ---------- ---------- MEETRLSASE ELPQTRTIPR TTALCSGHDA ENSTTRP00000007836/1-753 SLLPPASLGT GD-WRSVRSQ MEETRPSASE ELPQTHTIPR TAALCSGHDA bmy_01566T0/1-721 CLLPPASLGT GD-LHSMRSQ MEETRLSASE ELPQTRTIPR TTALCSGHDA 151 200 ENSP00000367229/1-757 DTEDDPSLAD LPQALDLSQQ PHSSGLSCLS QWKSVLSPGS AA-QPSSCSI ENSBTAP00000022223/1-750 DTEDDPSPVE SPQVPDLCPQ SPISGFPCPS RWRSAVSPGT PAPPSSSCSM BACU013723/1-558 DADNDPSPVE SPQVLARSPQ SHVSGCPFPS RWRSAVSPGA TAPQSSSCSV ENSTTRP00000007836/1-753 DTEDDPSPVE SPQALDHSPQ SHVSGFPFPS RCRSAVSPGA TAPQSSSCSV bmy_01566T0/1-721 DTEDDPSPVE SPEVLDRSPQ SHISGFPFPS RWRSAVSPGA TAPQSSSCSV 201 250 ENSP00000367229/1-757 SASSTGSSLQ GHQERAEPRG GSLAKVSSSL EPVVPQEPSS VVGLGPRPQW ENSBTAP00000022223/1-750 SASSPGSSLQ GHQEKAEPRS GCLAKVSSSL ELAVPPSAPS VVSPGPRLQW BACU013723/1-558 SASSPGSSLQ GHQEKAEPQS CSLAKVSSSL ELAVPPSAPS VVGLGPRFQW ENSTTRP00000007836/1-753 CASSPGSSLQ GHQEKVEPQS CSLAKVSSSL ELAVPPSAPS VVGPGPRLQW bmy_01566T0/1-721 SASSPGSSLQ GHQEKVEPQS CSLAKVSSSL ELAVPPSAPS VVGLGPRFQW 251 300 ENSP00000367229/1-757 SPQPVFSGGD ASGLGRRRLS FQAEYWACVL PDSLPPSPDR HSPLWNPNKE ENSBTAP00000022223/1-750 LPQPVSSAGD ASGLGRRRLS FQAEYWACVL PDSLPPSPDR RSPLWNPNKE BACU013723/1-558 SPQPVSSGGD APGLGRRRLS FQAEYWACVL PDSLPPSPDR HSPLWSPNKE ENSTTRP00000007836/1-753 SPQPVSSGGD APGLGRRRLS FQAEYWACVL PDSLPPSPDR HSPLWSPNKE bmy_01566T0/1-721 SPQPASSGGD APGLGRRRLS FQAEYWACVL PDSLPPSPDR HSPFWSPNKE 301 350 ENSP00000367229/1-757 YEDLLDYTYP LRPGPQLPKH LDSRVPADPV LQDSGVDLDS FSVSPASTLK ENSBTAP00000022223/1-750 YEDLLDYTYP LRPGPRLPKQ LDSHVLAEPV LQDSGIDLDS FSVSPASTLK BACU013723/1-558 YEDLLDYTYP LRPGPQLPKH LDSRVLAEPV LQDSGVDLDS FSVSPASTLK ENSTTRP00000007836/1-753 YEDLLDYTYP LRPGPQLPKH LDSRVLAEPV LQDSGIDLDS FSVSPASTLK bmy_01566T0/1-721 YEDLLDYTYP LRPGPQLPKH LDSRVLAEPV LQDSGVDLDS FSVSPASTLK 351 400 ENSP00000367229/1-757 SPTNVSPNCP PAEATALPFS GPREPSLKQW PSRVPQKQGG MGLASWSQLA ENSBTAP00000022223/1-750 SPTNVSHSCP PAEAAALSFS GPREPSLKRG PSGVPQKQGG VGLASCSLFA BACU013723/1-558 SPTNVSHSCP PAEAAALPFS GPREPISKRW PSGVPQKQGS VGLASCSPIA ENSTTRP00000007836/1-753 SPTNVSHSCP PAEAAALPFS GPREPILKRW PSGVPQKQGS VGLASCSPIA bmy_01566T0/1-721 SPTNVSHSCP PAEAAALPFS GPREPISKRW PSGVPQKQGS VGLASCSPIA 401 450 ENSP00000367229/1-757 STPRAPGSRD ARWERREPAL RGAKDRLTIG KHLDMGSPQL RTRDRGWPSP ENSBTAP00000022223/1-750 STPRAPSGRA TPWVSREPAR RNLRDWPPVG RHLELGSPRL RTRDKGWSSP BACU013723/1-558 STPRAPGSRD TPWESREPTL RGMKHWPPVG KHLELGSPHL RTRGRGWPSP ENSTTRP00000007836/1-753 STPRAPGSRD TPWESREPAL RGMKHWPPVG KHLELGSPYL RTRDRGWPSP bmy_01566T0/1-721 STPRAPGSRD TPWESREPAL RGMKHWPPVG KHLELGSPHL RTRDRGWPSP 451 500 ENSP00000367229/1-757 RPEREKRTSQ SARRPTCTES RWKSEEEVES DDEYLALPAR LTQVSSLVSY ENSBTAP00000022223/1-750 GLEREKGASQ GLRRLTCEES GWKPQEEVES DDEYLALPTR LTQVSSVISY BACU013723/1-558 RLEREKGASQ GIGRFACTES GWKPQEEVES DDEYLALPSR LTQVSSLVSY ENSTTRP00000007836/1-753 RLEREKGASQ GIERFACTES GWKPQEEAES EDEYLALPSR LTQVSSLVSY bmy_01566T0/1-721 RLEREKGASQ GIGRFACTES GWKPQEEVES DDEYLALPSR LTQVSSLVSY 501 550 ENSP00000367229/1-757 LGSISTLVTL PTGDIKGQSP LEVSDSDGPA SFPSSSSQSQ LPPGAALQGS ENSBTAP00000022223/1-750 LGSIPTLVPL STDAAEGQSS LDVSDSDGPA SLPSDSSQSQ LPSGATLRGS BACU013723/1-558 LGCIPSLVPL PTDAAEGQGS LDVSDSDGPA SLPSDSSQSQ LPFGAALRGS ENSTTRP00000007836/1-753 LGCIPTLVPL PTDAAEGQRS LDVSDSDGPA SLPSDSSQSQ LPSGAALRGS bmy_01566T0/1-721 LGCIPTLVPL PTDAAEGQRS LDVSDSDGPV SLPSDSSQSQ LPSGAALRGS 551 600 ENSP00000367229/1-757 GDPEGQNPCF LRSFVRAHDS AGEGSLGSSQ ALGVSSGLLK TRPSLPARLD ENSBTAP00000022223/1-750 WSAEDQKHCL RRSFVHARRS AREGSLVSSQ ALGVSSGPVR TRASWSAVLD BACU013723/1-558 RSPEDHNHCL LRSFVRARGS AGEGGLVSSQ ALGVSSGPLR TRASLPAMLD ENSTTRP00000007836/1-753 RSPEDHNHCL LRSFVRARGS GGEGSLLSSQ ALGVSSGPLR THACLPAMLD bmy_01566T0/1-721 RSPEDHNHCW LRSFVRARGS AGEGGLVSSQ ALGVSSGPLR TRASLPAMLD 601 650 ENSP00000367229/1-757 RWPFSDPDVE GQLPRKGGEQ GKESLVQCVK TFCCQLEELI CWLYNVADVT ENSBTAP00000022223/1-750 ------PDAE GQPPRKGGEQ GKESLVQCVQ TFCCQLEELI HWLYNVADTT BACU013723/1-558 QRAFSDPDAE GQPPRRGGEQ GKESLVQCVK AFCCQLEELI RWLYNVADAA ENSTTRP00000007836/1-753 QRASSDPDAE GQPPRKGGEQ GKESLVQCVK TFCCQLEELI RWLYNVADAA bmy_01566T0/1-721 QRAFSDPDAE GQPPRRGGEQ GKESLVQCVK ---------- ---------- 651 700 ENSP00000367229/1-757 DHGTAARSNL TSLKSSLQLY RQFKKDIDEH QSLTESVLQK GEILLQCLLE ENSBTAP00000022223/1-750 DHLTAPRSNL TGLKSSLQLY RQFKKDIDEH QSLTESVLQK GEILLQSLLD BACU013723/1-558 DHLTASRSSL TGLKSSLQLY R--------- ---------- ---------- ENSTTRP00000007836/1-753 DHLTASRSSL TGLKSSLQLY RQFKKDIDEH QSLTESVLQK GEILLQCLLD bmy_01566T0/1-721 ---------- ---------- -QFKKDIDDH QSLTESVIQK GEILLQCLLD 701 750 ENSP00000367229/1-757 NTPVLEDVLG RIAKQSGELE SHADRLYDSI LASLDMLAGC TLIPDKKPMA ENSBTAP00000022223/1-750 NTPVLKDVLG RISRQPSALE SHADRLYDTI LASLDTLAGC TLTPDSTPAA BACU013723/1-558 ---------- ---------- ---------- -----VICG- ---------- ENSTTRP00000007836/1-753 NTPVLKDILG RISRQPSELE SHADHLYDTI LASLDTLAGC TLIPENTPMA bmy_01566T0/1-721 NTPVLKDILG RISRQPSELE SHADHLYDTI LASLDTLAGC TLIPDNTPMA 751 800 ENSP00000367229/1-757 AMEHPCEGV- -------- ENSBTAP00000022223/1-750 HRSTGVKGI- -------- BACU013723/1-558 ------PGI- -------- ENSTTRP00000007836/1-753 -QERQCEGD- -------- bmy_01566T0/1-721 HRSASVKGIS LASSQEEM