KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:34 2014 Check: 00 .. Name: ENSP00000359357/1-422 Len: 589 Check: 8987 Weight: 1.00 Name: ENSBTAP00000022231/1-420 Len: 589 Check: 4284 Weight: 1.00 Name: BACU002814/1-480 Len: 589 Check: 7874 Weight: 1.00 Name: bmy_20450T0/1-527 Len: 589 Check: 2152 Weight: 1.00 Name: ENSTTRP00000000074/1-418 Len: 589 Check: 1478 Weight: 1.00 // 1 50 ENSP00000359357/1-422 ---------- ---------- ---------- ---------- ----MPRSFL ENSBTAP00000022231/1-420 ---------- ---------- ---------- ---------- ----MPRSFL BACU002814/1-480 MNQANSCPHT WNERYKGLRQ TGAYGGLTEA PGTLGAEWGA RPTTMPRSFL bmy_20450T0/1-527 ---------- ---------- ---------- ---------- ----MPRSFL ENSTTRP00000000074/1-418 ---------- ---------- ---------- ---------- ----MPRSFL 51 100 ENSP00000359357/1-422 VKSKKAHSYH QPRSPGPDYS LRLENVPAPS R--------- ---------- ENSBTAP00000022231/1-420 VKSKKAHSYH QPRSPGPDYS LRLENVLAPG G--------- ---------- BACU002814/1-480 VKSKKAHSYH QPRSPGPDYS LRLENVLAPG G--------- ---------- bmy_20450T0/1-527 VKSKKAHSYH QPRSPGPDYS LRLENVLAPG GAGAGRARVG RGRSRGHRLC ENSTTRP00000000074/1-418 VKSKKAHSYH QPRSPGPDYS LRLENVLAPG G--------- ---------- 101 150 ENSP00000359357/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022231/1-420 ---------- ---------- ---------- ---------- ---------- BACU002814/1-480 ---------- ---------- ---------- ---------- ---------- bmy_20450T0/1-527 VPPHHPPGTG KGGPEAPLLP FFVTYLSGSF RACRLGAKAS LLPPLDPGGF ENSTTRP00000000074/1-418 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000359357/1-422 ---------- ---------- ---------- --------AD STSNAGGAKA ENSBTAP00000022231/1-420 ---------- ---------- ---------- --------AD GISSTGGAKA BACU002814/1-480 ---------- ---------- ---------- --------AD STSSTGGAKA bmy_20450T0/1-527 RPGLGRAEGA QVPRSGGRRF RTIGPIQTQP EPLSCLLSAD STSSTGGAKA ENSTTRP00000000074/1-418 ---------- ---------- ---------- --------AD STSSTGGAKA 201 250 ENSP00000359357/1-422 EPRDRLSPES QLTEAPDRAS ASPDSCEGSV CERSSEFEDF WRPPSPSASP ENSBTAP00000022231/1-420 ELRGRVSPES QLTEAPDRAS ASPGSCEGSV CDRSSEFEDF WRPPSPSVSP BACU002814/1-480 EPQGRLSPES QLTEAPDRTS TSPGSCEGSV CDRSSESEDF WRPPSPSVSP bmy_20450T0/1-527 EPRGRFSPES QLTEAPDRAS TSPGSCEGSV CDRSSESEDF WRPPSPSVSP ENSTTRP00000000074/1-418 EPRGRLSPES QLTEAPDRAS TSPGSCEGSV CDRSSEFEDF WRPPSPSVSP 251 300 ENSP00000359357/1-422 ---------- ------ASEK SMCPSLDEAQ PFPLPFKPYS WSGLAGSDLR ENSBTAP00000022231/1-420 ---------- ------ASEK SVCPSLDEAQ PFPLPFKPYS WSGLAGSDLR BACU002814/1-480 GRDPLGALGP GRQRPRASEK SVCPSLDEVQ PFSLPFKPYS WSGLAGSDLR bmy_20450T0/1-527 ---------- ------ASEK SVCPSLDEVQ PFSLPFKPYS WSGLAGSDLR ENSTTRP00000000074/1-418 ---------- ------ASEK SVCPSLDEVQ PFPLPFKPYS WSGLAGSDLR 301 350 ENSP00000359357/1-422 HLVQSYRPCG ALERGAGLGL FCEPAPEPGH PAALYGPKRA AGGAGAGAPG ENSBTAP00000022231/1-420 HLVQSYRPCA ALERGAGLGL FCERAPEPGH PAALYGPERA AGGAGAGAPG BACU002814/1-480 HLVQSYRPCA ALERGAGLGL FCERAPEPGH PAALYGRERA AGGAGDGAPG bmy_20450T0/1-527 HLVQSYRPCA ALERGAGLGL FCERAPEPGH PAALYGRERA AGGAGAGAPA ENSTTRP00000000074/1-418 HLVQSYRPCA ALERGAGLGL FCERAPEPGH PAALYGRDRA AGGAGAGAPG 351 400 ENSP00000359357/1-422 SCSAGAGATA GPGLGLYGDF GSAAAGLYER PTAAAGLLYP ERGHGLHADK ENSBTAP00000022231/1-420 GGSAGGGTAG GAGLGLFGDF GPAAAGLYER P--ATGGLYP ERGHGLHGDK BACU002814/1-480 GGSAGGVAAG GAGLGLYGDF GPAAAGLYER P--ATGGLYP ESGHGLHGDK bmy_20450T0/1-527 GGSAGGGAAG GAGLGLYRDF GPAAAGLYER P--ATGGLYP ESGHGLHGDK ENSTTRP00000000074/1-418 GGSAGGGAAG GAGLGLYRDF GPAAAGLYER P--AA--LYS ESGHGLHGDK 401 450 ENSP00000359357/1-422 GAGVKVESEL LCTRLLLGGG SYKCIKCSKV FSTPHGLEVH VRRSHSGTRP ENSBTAP00000022231/1-420 GTGVKVESEL LCTRLLLGGG SYKCIKCSKV FSTPHGLEVH VRRSHSGTRP BACU002814/1-480 GTGVKVESEL LCTRLLMGGG AYKCIKCSKV FSTPHGLEVH VRRSHSGTRP bmy_20450T0/1-527 GTGVKVESEL LCTRLLMGGG AYKCIKCSKV FSTPHGLEVH VRRSHSGTRP ENSTTRP00000000074/1-418 GTGVKVESEL LCTRLLMGGG AYKCIKCSKV FSTPHGLEVH VRRSHSGTRP 451 500 ENSP00000359357/1-422 FACEMCGKTF GHAVSLEQHK AVHSQERSFD CKICGKSFKR SSTLSTHLLI ENSBTAP00000022231/1-420 FACEICGKTF GHAVSLEQHK AVHSQERSFD CKICGKSFKR SSTLSTHLLI BACU002814/1-480 FACEICGKTF GHAVSLEQHK AVHSQERSFD CKICGKSFKR SSTLSTHLLI bmy_20450T0/1-527 FACEICGKTF GHAVSLEQHK AVHSQERSFD CKICGKSFKR SSTLSTHLLI ENSTTRP00000000074/1-418 FACEICGKTF GHAVSLEQHK AVHSQERSFD CKICGKSFKR SSTLSTHLLI 501 550 ENSP00000359357/1-422 HSDTRPYPCQ YCGKRFHQKS DMKKHTFIHT GEKPHKCQVC GKAFSQSSNL ENSBTAP00000022231/1-420 HSDTRPYPCQ YCGKRFHQKS DMKKHTFIHT GEKPHKCQVC GKAFSQSSNL BACU002814/1-480 HSDTRPYPCQ YCGKRFHQKS DMKKHTFIHT GEKPHKCQVC GKAFSQSSNL bmy_20450T0/1-527 HSDTRPYPCQ YCGKRFHQKS DMKKHTFIHT GEKPHKCQVC GKAFSQSSNL ENSTTRP00000000074/1-418 HSDTRPYPCQ YCGKRFHQKS DMKKHTFIHT GEKPHKCQVC GKAFSQSSNL 551 600 ENSP00000359357/1-422 ITHSRKHTGF KPFGCDLCGK GFQRKVDLRR HRETQHGLK ENSBTAP00000022231/1-420 ITHSRKHTGF KPFGCDLCGK GFQRKVDLRR HRETQHGLK BACU002814/1-480 ITHSRKHTGF KPFGCDLCGK GFQRKVDLRR HRETQHGLK bmy_20450T0/1-527 ITHSRKHTGF KPFGCDLCGK GFQRKVDLRR HRETQHGLK ENSTTRP00000000074/1-418 ITHSRKHTGF KPFGCDLCGK GFQRKVDLRR HRETQHGLK