KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:38 2014 Check: 00 .. Name: ENSTTRP00000007097/1-570 Len: 687 Check: 7793 Weight: 1.00 Name: ENSP00000400252/1-605 Len: 687 Check: 1169 Weight: 1.00 Name: bmy_19490T0/1-626 Len: 687 Check: 6021 Weight: 1.00 Name: BACU011482/1-622 Len: 687 Check: 2401 Weight: 1.00 Name: ENSBTAP00000022242/1-616 Len: 687 Check: 9226 Weight: 1.00 // 1 50 ENSTTRP00000007097/1-570 ---------- ---------- ---------- ---------- ---------- ENSP00000400252/1-605 ---------- ---------- ---------- ---------- ---------- bmy_19490T0/1-626 GTGGASNVAG WWGHVLRISF RAALRSAAPR PGPARVARQR VNSKAPSRLR BACU011482/1-622 ---------- ----MAAVTY GLAFAAGT-- ---------- ---------- ENSBTAP00000022242/1-616 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007097/1-570 ---------- ---------- -MEIVYVYVK KRSEFGKHCN FSDRQAELNI ENSP00000400252/1-605 ---------- ---------- -MEIVYVYVK KRSEFGKQCN FSDRQAELNI bmy_19490T0/1-626 SRGAGTAARV LPQRPSGNRN GPRIVYVYVK KRSEFGKQCN FSDRQAELNI BACU011482/1-622 ---------- ---------- -MEIVYVYVK KRSEFGKQCN FSDRQAELNI ENSBTAP00000022242/1-616 ---------- ---------- -MEIVYVYVK KRSEFGKQCN FSDRQAELNI 101 150 ENSTTRP00000007097/1-570 DIPPNPELAK QFMERNPVDT GIQCSISMSE HEANTERFEM ETRGVNHIEG ENSP00000400252/1-605 DIMPNPELAE QFVERNPVDT GIQCSISMSE HEANSERFEM ETRGVNHVEG bmy_19490T0/1-626 DIPPDPELAK QFMERNPVDT GIQCSTSMSE HEANTERFEM ETRGVNHIEG BACU011482/1-622 DIPPNPELAK QFVERNPVDT GIQCSTSMSE HEANTERFEM ETRGVNHIEG ENSBTAP00000022242/1-616 DIPPNPELAE QFVERNPVDT GIQCSTSMSE HEANTERFEM ETRGVNHIEG 151 200 ENSTTRP00000007097/1-570 GWPKDVNPLE LEQTIRFRKK VEKDENYVNT IMQLGSVVEH CIKQNNAIDI ENSP00000400252/1-605 GWPKDVNPLE LEQTIRFRKK VEKDENYVNA IMQLGSIMEH CIKQNNAIDI bmy_19490T0/1-626 GWPKDVNPLE LEQTIRFRKK VEKDENYINT IMQLGSIMEH CIKQNNAIDI BACU011482/1-622 GWPKDVNPLE LEQTIRFRKK VEKDENYINT IMQLGSIMEH CIKQNNAIDI ENSBTAP00000022242/1-616 GWPKDVNPLE LEQTIRFRKK VEKDENYINA IMQLGSIMEH CIKQNNAIDI 201 250 ENSTTRP00000007097/1-570 YQEYFDDEDA VEVMEEAPSA KTVSVFXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000400252/1-605 YEEYFNDEEA MEVMEEDPSA KTINVFRDPQ EIKRAATHLS WHPDGNRKLA bmy_19490T0/1-626 YQEYFDDEDA VEVMEEAPSA KTINVF---- ---------- ------RKLA BACU011482/1-622 YQEYFDDEDA VEVMEEAPSA KTINVFRDPQ EIKRPATHIS WHPDGNRKLA ENSBTAP00000022242/1-616 YQEYFDDEDA VEVTDEAPSA KTINVFRDPQ EIKRPATHVS WHPDGNRKLA 251 300 ENSTTRP00000007097/1-570 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000400252/1-605 VAYSCLDFQR APVGMSSDSY IWDLENPNKP ELALKPSSPL VTLEFNPKDS bmy_19490T0/1-626 VAYSCLNFQR APAGMSNESY IWDLENPNRP EIALKPSSPL VTLEYNPKDS BACU011482/1-622 VAYSCLNFQR APEGMSNESY IWDLENPNRP EIALKPSSPL VTLEYNPKDS ENSBTAP00000022242/1-616 VAYSCLNFQR APEGMSNESY IWDLENPNRP EITLKPSSPL VTLEYNPKDS 301 350 ENSTTRP00000007097/1-570 XXLLAGCYNG QIACWDTRKG SLVAELSTIE FSHRDPVYGT IWLQSKTGTE ENSP00000400252/1-605 HVLLGGCYNG QIACWDTRKG SLVAELSTIE SSHRDPVYGT IWLQSKTGTE bmy_19490T0/1-626 HVLLAGCYNG QIACWDTRKG SLVAELSTIE FSHRDPVYGT IWLQSKTGTE BACU011482/1-622 HVLLAGCYNG QIACWDTRKG SLVAELSTIE FSHRDPVYST IWLQSKTGTE ENSBTAP00000022242/1-616 HVLLAGCYNG QIACWDTRKG SLVAELSTIE FSHRDPVYGT IWLQSKTGTE 351 400 ENSTTRP00000007097/1-570 CFSASTDGQ- ---------- ---------- -------TLG TTILLW---- ENSP00000400252/1-605 CFSASTDGQV MWWDIRKMSE PTEVVILDIT KKEQLENALG AISLEFESTL bmy_19490T0/1-626 CFSASTDGQV MWWDIRKMSE PTEVVIMDIT RKEQLEHALG AISLEFESTM BACU011482/1-622 CFSSSTDGQV MWWDVRKMTE PTEVVILDIT RNERLEHALG ALSLEFESTL ENSBTAP00000022242/1-616 CFSASTDGQV MWWDIRKLSE PTEVVIMDIT KKEHLENALG AISLEFESTL 401 450 ENSTTRP00000007097/1-570 PTKFMVGTEQ GIVISCNRKA KTPAEKIVCT FSGHHGPIYA LQRNPFYPKN ENSP00000400252/1-605 PTKFMVGTEQ GIVISCNRKA KTSAEKIVCT FPGHHGPIYA LQRNPFYPKN bmy_19490T0/1-626 PTKFMVGTEQ GIVISCNRKA KTSAEKIVCT FSGHHGPIYA LQRNPFYPKN BACU011482/1-622 PTKFMVGTEQ GIVISCNRKA KTSAEKIVCT FSGHHGPIYA LQRNPFYPKN ENSBTAP00000022242/1-616 PTKFMVGTEQ GVVISCNRKG KTPAEKIVCT FSGHHGPIYA LQRNPFYPKN 451 500 ENSTTRP00000007097/1-570 FLTVGDWTAR IWSEDSRESS IMWTKYHMAY LTDGAWSPVR PAVFFTTKMD ENSP00000400252/1-605 FLTVGDWTAR IWSEDSRESS IMWTKYHMAY LTDAAWSPVR PTVFFTTRMD bmy_19490T0/1-626 FLTVGDWTAR IWSEDSRESS IMWTKYHMAY LTDGAWSPVR PAVFFTTKMD BACU011482/1-622 FLTVGDWTAR IWSEDSRESS IMWTKYHMAY LTDGAWSPVR PAVFFTTKMD ENSBTAP00000022242/1-616 FLTVGDWTAR IWSEDSRESS IMWTKYHMAY LTDAAWSPVR PAVFFTTKMD 501 550 ENSTTRP00000007097/1-570 GTLDIWDFVF KQCDPALSLK VCDEALFCLR VQDNGCFIAC GSQLGTTTLL ENSP00000400252/1-605 GTLDIWDFMF EQCDPTLSLK VCDEALFCLR VQDNGCLIAC GSQLGTTTLL bmy_19490T0/1-626 GTLDIWDF-- ---------- VCDEALFCLR LQDNGCFIAC GSQLGTTTLL BACU011482/1-622 GTLDIWDFVF KQCDPALSLK VCDEALFCLR LQDNGCFIAC GSQLGTTTLL ENSBTAP00000022242/1-616 GTLDIWDFVF KQCDPALSLK VCDEALFCLR VQDNGCFIAC GSQLGTTTLL 551 600 ENSTTRP00000007097/1-570 EVSNGLCTLQ RNEKNMVSSI FERETRREKI METRHREMRL KKKSKAEGRE ENSP00000400252/1-605 EVSPGLSTLQ RNEKNVASSM FERETRREKI LEARHREMRL KEKGKAEGRD bmy_19490T0/1-626 EVSSGLCTLQ KNEKNMVSSI FERETRREKI LEARHREMRL KEKGKAEGKD BACU011482/1-622 EVSSGLCTLQ RNEKNTVSSM FERETRREKI LEARHREMRL KEKGKAEGKD ENSBTAP00000022242/1-616 EVSNGLCTLQ RNEKNTASSM FERETRREKI LEARHREMRL KEKGKAEGRD 601 650 ENSTTRP00000007097/1-570 SYPSEEKPAL NPEQLVTEAE EEFFNVIFTE LKRREAEAMK EKPKP-KLPS ENSP00000400252/1-605 EEQTDEELAV DLEALVSKAE EEFFDIIFAE LKKKEADAIK LTPVP-QQPS bmy_19490T0/1-626 DDLREGEPAL NLEELVTKAE EEFFDVIFTE LKKREAEAMK KKPKPKTLVA BACU011482/1-622 DDPREGEPAL NLEELVTKAE EEFFDVIFTE LKKREAEAMK QKPKPLKQPS ENSBTAP00000022242/1-616 DELRDEPPIL NLEELVTKAE EEFFDIIFTE LKRKEAEAMK KQPKPPKQPS 651 700 ENSTTRP00000007097/1-570 PEEDE-VEGE EQGEEER--- ---------D VKRVQPW ENSP00000400252/1-605 PEEDQVVEEG EEAAGEEGD- ------EEVE EDLA--- bmy_19490T0/1-626 ---------- ---------- ---------A FTMGNRF BACU011482/1-622 LETEEEVEGE EEGAEER-D- ------GEES PTLEGQP ENSBTAP00000022242/1-616 QETDEEVQGE EEAEEERGDG EGEEGGGEES PALGGQP