KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:39 2014 Check: 00 .. Name: ENSP00000366902/1-688 Len: 800 Check: 634 Weight: 1.00 Name: BACU001111/1-768 Len: 800 Check: 8701 Weight: 1.00 Name: ENSBTAP00000022249/1-688 Len: 800 Check: 1734 Weight: 1.00 Name: bmy_09523T0/1-689 Len: 800 Check: 3359 Weight: 1.00 Name: ENSTTRP00000006002/1-684 Len: 800 Check: 3680 Weight: 1.00 // 1 50 ENSP00000366902/1-688 ---------- ---------- ---------- ---------- ---------- BACU001111/1-768 MSSLALLGNP RRRAQRRGNG AVPAFPCTPL AVIYVVPPPG AGGKGLRLRG ENSBTAP00000022249/1-688 ---------- ---------- ---------- ---------- ---------- bmy_09523T0/1-689 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006002/1-684 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000366902/1-688 ---------- ---------- ---------- ---------- ---------- BACU001111/1-768 VPPRPARSDV TSGGGGGGGD GSVSARSARH LTAGVVGQWG CASDLAWGRR ENSBTAP00000022249/1-688 ---------- ---------- ---------- ---------- ---------- bmy_09523T0/1-689 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006002/1-684 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000366902/1-688 ---------- -MDGSFVQHS VRVLQELNKQ REKGQYCDAT LDVGGLVFKA BACU001111/1-768 GWRREDWPGR TMDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA ENSBTAP00000022249/1-688 ---------- -MDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA bmy_09523T0/1-689 ---------- -MDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA ENSTTRP00000006002/1-684 ---------- -MDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA 151 200 ENSP00000366902/1-688 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS BACU001111/1-768 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS ENSBTAP00000022249/1-688 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS bmy_09523T0/1-689 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS ENSTTRP00000006002/1-684 HWSVLACCSR FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS 201 250 ENSP00000366902/1-688 GNRDQVLLAA RELRVPEAVE LCQSFKPKTS VGQAAGGQSG LGPPASQNVN BACU001111/1-768 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGLAPSGHSG LGKPAPRDVN ENSBTAP00000022249/1-688 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGQPPSGQSG LGKSAPRDVN bmy_09523T0/1-689 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGLAPSGHSG LGKPTPRDVS ENSTTRP00000006002/1-684 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGQAPSGQSG LGKPAPRDVN 251 300 ENSP00000366902/1-688 SHVKEPAGLE EEEVSRTLGL VPRDQEPRGS HSPQRPQLHS PAQSEGPSSL BACU001111/1-768 SHLKEPASLE EEEVSRTLGQ TPRDQELSGS PSLQRCQLGL PAQSENPSFL ENSBTAP00000022249/1-688 SHLKESAGVE KEEVSRTLGQ IPRDPELSGS LSPQRPRLGL PAQSESPSFL bmy_09523T0/1-689 SHLKEPASLE EEEVSRTLGQ TPRDQELSGS PSLQRPQLGL PAQSENPSFL ENSTTRP00000006002/1-684 SHLKEPASLE EEEVSRTLGQ TPRDQELSGS PSLQRPQLGL PPQSENPSFL 301 350 ENSP00000366902/1-688 CGKLKQALKP CPLEDKKPED CKVPPRPLEA EGAQLQGGSN EWEVVVQVED BACU001111/1-768 RGKLKQALKL CPPEDKEPED CRVPPRPFEA EGVQLQGGSN EWEVVVQVED ENSBTAP00000022249/1-688 RGKLKQALKL CPPGDKEPED CKVPPRPFEA EGVQLQGGTN EWEVVVQVED bmy_09523T0/1-689 RGKLKQALKL CPPEDKEPED CRVPPRPFEA EGVQLQGGSN EWEVVVQVED ENSTTRP00000006002/1-684 RGKLKQALKL SPPENKEPED GRVPPRPFEA EGVQLQGGSN EWEVVVQVED 351 400 ENSP00000366902/1-688 DGDGDYMSEP EAVLTRRKSN VIRKPCAAEP ALSAGSLAAE PAENRKGTAV BACU001111/1-768 DGDGDYVSEP ETVPTRRKSN VIRKPCAAEP ALSAGSRAAE PAENRKDSS- ENSBTAP00000022249/1-688 DGDGDYDSET ETVPTKRKAN VIRKPCAAEP ARSVGSLAAE PAENRKGTAV bmy_09523T0/1-689 DGDGDYVSET ETVPTRRKSN VIRKPCAAEP ALSAGSRAAE PAENRKGTAV ENSTTRP00000006002/1-684 DGDGDYVSET ETVPTRRKSN VIRKPCAAEP ALSAGSRAAE PAENRKGTAV 401 450 ENSP00000366902/1-688 PVECPTCHKK FLSKYYLKVH N-RKHTGEKP FECPKCGKCY FRKENLLEHE BACU001111/1-768 ---------- ---------- --RKRV-EAP VKAVVEAEA- ------PADT ENSBTAP00000022249/1-688 PVECPTCHKK FLSKYYLKVH N-RKHTGEKP FECAKCGKCY FRKENLLEHE bmy_09523T0/1-689 PVECPTCHKK FLSKYYLKVH NSRKHTGEKP FECPKCGKCY FRKENLLEHE ENSTTRP00000006002/1-684 PVECPTCRKK FLSKYYLKVH N-RKHTGEKP FECPKCGKCY FRKEN-LKHE 451 500 ENSP00000366902/1-688 ARNCMNRSEQ VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM BACU001111/1-768 GPTCPSHCQ- VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM ENSBTAP00000022249/1-688 ARNCMNRSEQ VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM bmy_09523T0/1-689 ARNCMNRSEQ VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM ENSTTRP00000006002/1-684 ARNCMNRSE- VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCASCSQQFM 501 550 ENSP00000366902/1-688 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC BACU001111/1-768 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC ENSBTAP00000022249/1-688 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC bmy_09523T0/1-689 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC ENSTTRP00000006002/1-684 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC 551 600 ENSP00000366902/1-688 EECGHRASSR NGLQMHIKAK HRNERPHVCE FCSHAFTQKA NLNMHLRTHT BACU001111/1-768 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT ENSBTAP00000022249/1-688 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT bmy_09523T0/1-689 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT ENSTTRP00000006002/1-684 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT 601 650 ENSP00000366902/1-688 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR BACU001111/1-768 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR ENSBTAP00000022249/1-688 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR bmy_09523T0/1-689 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR ENSTTRP00000006002/1-684 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR 651 700 ENSP00000366902/1-688 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT BACU001111/1-768 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT ENSBTAP00000022249/1-688 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT bmy_09523T0/1-689 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT ENSTTRP00000006002/1-684 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTEXXXXXX 701 750 ENSP00000366902/1-688 RQAHLRRHME IHDRVENYNP RQRKLRNLII EDEKMVVVAL QPPAELEVGS BACU001111/1-768 RQAHLRRHME IHDRVENYNP RQRKLRNLVI EDEKMVVVAL QPPTELEVGS ENSBTAP00000022249/1-688 RQAHLRRHME IHDRVENYNP RQRKLRNLVI EDEKMVVVAL QPPPDLEVGS bmy_09523T0/1-689 RQAHLRRHME IHDRVENYNP RQRKLRNLVI EDEKMVVVAL QPPTELEVGS ENSTTRP00000006002/1-684 XXAH-RRHME I-DRVENYNP RQRKLRNLVI EDEKMVVVAL QPPTELEVGS 751 800 ENSP00000366902/1-688 AEVIVESLAQ GGLASQLPGQ RLCAEESFTG PGVLEPSLII TAAVPEDCDT BACU001111/1-768 AEVIVESLAQ GGLASQLPGQ RLCAEESFSG PGVMEPSLII TAAIPEDCDT ENSBTAP00000022249/1-688 AEVIVESLAH GSLASQLPGQ RLCAEESFTG AGVMEPSLII TAAIPEDCDT bmy_09523T0/1-689 AEVIVESLAQ GSLASQLPGQ RLCAEESFSG PGVMEPSLII TAAIPEDCDT ENSTTRP00000006002/1-684 AEVIVESLAQ GGLASQLPGQ RLCAEETFSG PGVMEPSLII TAAIPEDCDT