KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:16:39 2014 Check: 00 ..
Name: ENSP00000366902/1-688 Len: 800 Check: 634 Weight: 1.00
Name: BACU001111/1-768 Len: 800 Check: 8701 Weight: 1.00
Name: ENSBTAP00000022249/1-688 Len: 800 Check: 1734 Weight: 1.00
Name: bmy_09523T0/1-689 Len: 800 Check: 3359 Weight: 1.00
Name: ENSTTRP00000006002/1-684 Len: 800 Check: 3680 Weight: 1.00
//
1 50
ENSP00000366902/1-688 ---------- ---------- ---------- ---------- ----------
BACU001111/1-768 MSSLALLGNP RRRAQRRGNG AVPAFPCTPL AVIYVVPPPG AGGKGLRLRG
ENSBTAP00000022249/1-688 ---------- ---------- ---------- ---------- ----------
bmy_09523T0/1-689 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006002/1-684 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000366902/1-688 ---------- ---------- ---------- ---------- ----------
BACU001111/1-768 VPPRPARSDV TSGGGGGGGD GSVSARSARH LTAGVVGQWG CASDLAWGRR
ENSBTAP00000022249/1-688 ---------- ---------- ---------- ---------- ----------
bmy_09523T0/1-689 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006002/1-684 ---------- ---------- ---------- ---------- ----------
101 150
ENSP00000366902/1-688 ---------- -MDGSFVQHS VRVLQELNKQ REKGQYCDAT LDVGGLVFKA
BACU001111/1-768 GWRREDWPGR TMDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA
ENSBTAP00000022249/1-688 ---------- -MDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA
bmy_09523T0/1-689 ---------- -MDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA
ENSTTRP00000006002/1-684 ---------- -MDGSFVQHS VRVLQELNKQ RERGQYCDAT LDVGGLVFKA
151 200
ENSP00000366902/1-688 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS
BACU001111/1-768 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS
ENSBTAP00000022249/1-688 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS
bmy_09523T0/1-689 HWSVLACCSH FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS
ENSTTRP00000006002/1-684 HWSVLACCSR FFQSLYGDGS GGSVVLPAGF AEIFGLLLDF FYTGHLALTS
201 250
ENSP00000366902/1-688 GNRDQVLLAA RELRVPEAVE LCQSFKPKTS VGQAAGGQSG LGPPASQNVN
BACU001111/1-768 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGLAPSGHSG LGKPAPRDVN
ENSBTAP00000022249/1-688 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGQPPSGQSG LGKSAPRDVN
bmy_09523T0/1-689 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGLAPSGHSG LGKPTPRDVS
ENSTTRP00000006002/1-684 GNRDQVLLAA RELRVPEAVE LCQSFKPKAS VGQAPSGQSG LGKPAPRDVN
251 300
ENSP00000366902/1-688 SHVKEPAGLE EEEVSRTLGL VPRDQEPRGS HSPQRPQLHS PAQSEGPSSL
BACU001111/1-768 SHLKEPASLE EEEVSRTLGQ TPRDQELSGS PSLQRCQLGL PAQSENPSFL
ENSBTAP00000022249/1-688 SHLKESAGVE KEEVSRTLGQ IPRDPELSGS LSPQRPRLGL PAQSESPSFL
bmy_09523T0/1-689 SHLKEPASLE EEEVSRTLGQ TPRDQELSGS PSLQRPQLGL PAQSENPSFL
ENSTTRP00000006002/1-684 SHLKEPASLE EEEVSRTLGQ TPRDQELSGS PSLQRPQLGL PPQSENPSFL
301 350
ENSP00000366902/1-688 CGKLKQALKP CPLEDKKPED CKVPPRPLEA EGAQLQGGSN EWEVVVQVED
BACU001111/1-768 RGKLKQALKL CPPEDKEPED CRVPPRPFEA EGVQLQGGSN EWEVVVQVED
ENSBTAP00000022249/1-688 RGKLKQALKL CPPGDKEPED CKVPPRPFEA EGVQLQGGTN EWEVVVQVED
bmy_09523T0/1-689 RGKLKQALKL CPPEDKEPED CRVPPRPFEA EGVQLQGGSN EWEVVVQVED
ENSTTRP00000006002/1-684 RGKLKQALKL SPPENKEPED GRVPPRPFEA EGVQLQGGSN EWEVVVQVED
351 400
ENSP00000366902/1-688 DGDGDYMSEP EAVLTRRKSN VIRKPCAAEP ALSAGSLAAE PAENRKGTAV
BACU001111/1-768 DGDGDYVSEP ETVPTRRKSN VIRKPCAAEP ALSAGSRAAE PAENRKDSS-
ENSBTAP00000022249/1-688 DGDGDYDSET ETVPTKRKAN VIRKPCAAEP ARSVGSLAAE PAENRKGTAV
bmy_09523T0/1-689 DGDGDYVSET ETVPTRRKSN VIRKPCAAEP ALSAGSRAAE PAENRKGTAV
ENSTTRP00000006002/1-684 DGDGDYVSET ETVPTRRKSN VIRKPCAAEP ALSAGSRAAE PAENRKGTAV
401 450
ENSP00000366902/1-688 PVECPTCHKK FLSKYYLKVH N-RKHTGEKP FECPKCGKCY FRKENLLEHE
BACU001111/1-768 ---------- ---------- --RKRV-EAP VKAVVEAEA- ------PADT
ENSBTAP00000022249/1-688 PVECPTCHKK FLSKYYLKVH N-RKHTGEKP FECAKCGKCY FRKENLLEHE
bmy_09523T0/1-689 PVECPTCHKK FLSKYYLKVH NSRKHTGEKP FECPKCGKCY FRKENLLEHE
ENSTTRP00000006002/1-684 PVECPTCRKK FLSKYYLKVH N-RKHTGEKP FECPKCGKCY FRKEN-LKHE
451 500
ENSP00000366902/1-688 ARNCMNRSEQ VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM
BACU001111/1-768 GPTCPSHCQ- VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM
ENSBTAP00000022249/1-688 ARNCMNRSEQ VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM
bmy_09523T0/1-689 ARNCMNRSEQ VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCSSCSQQFM
ENSTTRP00000006002/1-684 ARNCMNRSE- VFTCSVCQET FRRRMELRVH MVSHTGEMPY KCASCSQQFM
501 550
ENSP00000366902/1-688 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC
BACU001111/1-768 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC
ENSBTAP00000022249/1-688 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC
bmy_09523T0/1-689 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC
ENSTTRP00000006002/1-684 QKKDLQSHMI KLHGAPKPHA CPTCAKCFLS RTELQLHEAF KHRGEKLFVC
551 600
ENSP00000366902/1-688 EECGHRASSR NGLQMHIKAK HRNERPHVCE FCSHAFTQKA NLNMHLRTHT
BACU001111/1-768 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT
ENSBTAP00000022249/1-688 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT
bmy_09523T0/1-689 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT
ENSTTRP00000006002/1-684 EECGHRASSR NGLQMHIKAK HRNERPYVCE FCSHAFTQKA NLNMHLRTHT
601 650
ENSP00000366902/1-688 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR
BACU001111/1-768 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR
ENSBTAP00000022249/1-688 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR
bmy_09523T0/1-689 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR
ENSTTRP00000006002/1-684 GEKPFQCHLC GKTFRTQASL DKHNRTHTGE RPFSCEFCEQ RFTEKGPLLR
651 700
ENSP00000366902/1-688 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT
BACU001111/1-768 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT
ENSBTAP00000022249/1-688 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT
bmy_09523T0/1-689 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTECGYKFT
ENSTTRP00000006002/1-684 HVASRHQEGR PHFCQICGKT FKAVEQLRVH VRRHKGVRKF ECTEXXXXXX
701 750
ENSP00000366902/1-688 RQAHLRRHME IHDRVENYNP RQRKLRNLII EDEKMVVVAL QPPAELEVGS
BACU001111/1-768 RQAHLRRHME IHDRVENYNP RQRKLRNLVI EDEKMVVVAL QPPTELEVGS
ENSBTAP00000022249/1-688 RQAHLRRHME IHDRVENYNP RQRKLRNLVI EDEKMVVVAL QPPPDLEVGS
bmy_09523T0/1-689 RQAHLRRHME IHDRVENYNP RQRKLRNLVI EDEKMVVVAL QPPTELEVGS
ENSTTRP00000006002/1-684 XXAH-RRHME I-DRVENYNP RQRKLRNLVI EDEKMVVVAL QPPTELEVGS
751 800
ENSP00000366902/1-688 AEVIVESLAQ GGLASQLPGQ RLCAEESFTG PGVLEPSLII TAAVPEDCDT
BACU001111/1-768 AEVIVESLAQ GGLASQLPGQ RLCAEESFSG PGVMEPSLII TAAIPEDCDT
ENSBTAP00000022249/1-688 AEVIVESLAH GSLASQLPGQ RLCAEESFTG AGVMEPSLII TAAIPEDCDT
bmy_09523T0/1-689 AEVIVESLAQ GSLASQLPGQ RLCAEESFSG PGVMEPSLII TAAIPEDCDT
ENSTTRP00000006002/1-684 AEVIVESLAQ GGLASQLPGQ RLCAEETFSG PGVMEPSLII TAAIPEDCDT