KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:40 2014 Check: 00 .. Name: bmy_13624T0/1-364 Len: 700 Check: 154 Weight: 1.00 Name: ENSTTRP00000015824/1-619 Len: 700 Check: 1058 Weight: 1.00 Name: ENSP00000257600/1-620 Len: 700 Check: 9963 Weight: 1.00 Name: BACU003438/1-559 Len: 700 Check: 8794 Weight: 1.00 Name: ENSBTAP00000022253/1-669 Len: 700 Check: 4776 Weight: 1.00 // 1 50 bmy_13624T0/1-364 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015824/1-619 ---------- ---------- ---------- ---------- ---------- ENSP00000257600/1-620 ---------- ---------- ---------- ---------- ---------- BACU003438/1-559 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022253/1-669 EGPGGHKGGW TVLAALPGAR GSSPPPPPAP RPRRSCVGKK GVLAPRAAAA 51 100 bmy_13624T0/1-364 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015824/1-619 MSRPGQGVMM PVNGLGFPPQ NVARVVVWEW LNEHSRWRPY TATVCHHIEN ENSP00000257600/1-620 MSRPGHGGLM PVNGLGFPPQ NVARVVVWEW LNEHSRWRPY TATVCHHIEN BACU003438/1-559 MSRPGQGVMM PVNGLGFPPQ NVARVVVWEW LNEHSRWRPY TATVCHHIEN ENSBTAP00000022253/1-669 MSRPGQGVMM PVNGLGFPPQ NVARVVVWEW LNEHSRWRPY TATVCHHIEN 101 150 bmy_13624T0/1-364 ---------- ---------- ---------- ---------- ------HEP- ENSTTRP00000015824/1-619 VLKEDARGSV VLGQVDAQLV PYIIDLQSMX XXXXXXXTMR PVRRNFYDPS ENSP00000257600/1-620 VLKEDARGSV VLGQVDAQLV PYIIDLQSMH QFRQDTGTMR PVRRNFYDPS BACU003438/1-559 VLKEDARGSV VLGQVDAQLV PYIIDLQSMH QFRQDTGTMR PVRRNFYDPS ENSBTAP00000022253/1-669 VLKEDARGSV VLGQVDAQLV PYIIDLQSMH QFRQDTGTMR PVRRNFYDPS 151 200 bmy_13624T0/1-364 ---------- -EPEGKA--- ---------- -----ESP-- DLLVRGGCSL ENSTTRP00000015824/1-619 SAPGKGIVWE WENDGGAWTA YDMDICITIQ NAYEKQHPWL DLSSLGFCYL ENSP00000257600/1-620 SAPGKGIVWE WENDGGAWTA YDMDICITIQ NAYEKQHPWL DLSSLGFCYL BACU003438/1-559 SAPGKGIVWE WENDGGAWTA YDMDICITIQ NAYEKQHPWL DLSSLGFCYL ENSBTAP00000022253/1-669 SAPGKGIVWE WENDGGAWTA YDMDICITIQ NAYEKQHPWL DLSSLGFCYL 201 250 bmy_13624T0/1-364 F--------- ---------- ---------- ---------- ---------- ENSTTRP00000015824/1-619 IYFNSMSQMN RQTRRRRRLR RRLDLAYPLT VGSIPKSQSW PVGASSGQPC ENSP00000257600/1-620 IYFNSMSQMN RQTRRRRRLR RRLDLAYPLT VGSIPKSQSW PVGASSGQPC BACU003438/1-559 IYFNSMSQMN RQTRRRRRLR RRLDLAYPLT VGSIPKSH-- ---------- ENSBTAP00000022253/1-669 IYFNSMSQMN RQTRRRRRLR RRLDLAYPLT VGSIPKSQSW PVGASSGQPC 251 300 bmy_13624T0/1-364 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015824/1-619 SCQQCLLVNS TRAASNAILA SQRRKAPPAP P-PPQPPPGG PAGTLAVRPS ENSP00000257600/1-620 SCQQCLLVNS TRAASNAILA SQRRKAPPAP PLPPPPPPGG PPGALAVRPS BACU003438/1-559 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022253/1-669 SCQQCLLVNS TRAASNAILA SQRRKAPPAP P-PPQPPPGG PAGTLAVRPS 301 350 bmy_13624T0/1-364 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015824/1-619 ATFAGAALWA APAAGPAEPA QPLSASPRSP SAPSGAPTPG QNNLNRPGPQ ENSP00000257600/1-620 ATFTGAALWA APAAGPAEPA PPPGAPPRSP GAPGGARTPG QNNLNRPGPQ BACU003438/1-559 ---------- ---------- ---------P SAPSGAPTPG QNNLNRPGPQ ENSBTAP00000022253/1-669 ATFAGAALWA APAAGPAEPA QPPGALPRSP SAPGGAPTPG QNNLNRPGPQ 351 400 bmy_13624T0/1-364 ---------S SPLRVPALPV KNLNGTGPVH PALAGMTGIL LCAAGLPVCL ENSTTRP00000015824/1-619 RATSVSARAS IPPRVPALPV KNLNGTGPVH PALAGMTGIL LCAAGLPVCL ENSP00000257600/1-620 RTTSVSARAS IPPGVPALPV KNLNGTGPVH PALAGMTGIL LCAAGLPVCL BACU003438/1-559 RATSVSARAA IPPGVPALPV KNLNGTGPVH PALAGMTGIL LCAAGLPVCL ENSBTAP00000022253/1-669 RATSVSARAS IPPGVPALPV KNLNGTGPVH PALAGMTGIL LCAAGLPVCL 401 450 bmy_13624T0/1-364 TRAPKPILHP PPVSKSDVKP VPGVPGVCRK TKKKHLKKSK NPEDVVRRYM ENSTTRP00000015824/1-619 TRAPKPILHP PPVSKSDVKP VPGVPGVCRK TKKKHLKRSK NPEDVVRRYM ENSP00000257600/1-620 TRAPKPILHP PPVSKSDVKP VPGVPGVCRK TKKKHLKKSK NPEDVVRRYM BACU003438/1-559 TRAPKPILHP PPVSKSDVKP VPGVPGVCRK TKKKHLKKSK NPEDVVRRYM ENSBTAP00000022253/1-669 TRAPKPILHP PPVSKSDVKP VPGVPGVCRK TKKKHLKKSK NPEDVVRRYM 451 500 bmy_13624T0/1-364 QKVKNPPDED CTICMERLAT ASGYEGVLRH KGVRPELVGR LGRCGHMYHL ENSTTRP00000015824/1-619 QKVKNPPDED CTICMERLVT ASGYEGVLRH KGVRPELVGR LGRCGHMYHL ENSP00000257600/1-620 QKVKNPPDED CTICMERLVT ASGYEGVLRH KGVRPELVGR LGRCGHMYHL BACU003438/1-559 QKVKNPPDED CTICMERLAT ASGYEGVLRH KGVRPELVGR LGRCGHMYHL ENSBTAP00000022253/1-669 QKVKNPPDED CTICMERLVT ASGYEGVLRH KGVRPELVGR LGRCGHMYHL 501 550 bmy_13624T0/1-364 LCLVAMYSNG NKDGSLQCPT CKAIYGEKTG TQPPGKMEFH LIPHSLPGFA ENSTTRP00000015824/1-619 LCLVAMYSNG NKDGSLQCPT CKAIYGEKTG TQPPGKMEFH LIPHSLPGFA ENSP00000257600/1-620 LCLVAMYSNG NKDGSLQCPT CKAIYGEKTG TQPPGKMEFH LIPHSLPGFP BACU003438/1-559 LCLVAMYSNG NKDGSLQCPT CKAIYGEKTG TQPPGKMEFH LIPHSLPGFA ENSBTAP00000022253/1-669 LCLVAMYSNG NKDGSLQCPT CKAIYGEKTG TQPPGKMEFH LIPHSLPGFA 551 600 bmy_13624T0/1-364 DTQTIRIVYD IPTGIQVSPQ APGFEPSRGH RHRRCLWFKP LLPLPQGPEH ENSTTRP00000015824/1-619 DTQTIRIVYD IPTGIQ---- ---------- ---------- ------GPEH ENSP00000257600/1-620 DTQTIRIVYD IPTGIQ---- ---------- ---------- ------GPEH BACU003438/1-559 DTQTIRIVYD IPTGIQGPEH PNPGKKFTAR GFPRHCYLPN NEKGRKGPEH ENSBTAP00000022253/1-669 DTQTIRIVYD IPTGIQ---- ---------- ---------- ------GPEH 601 650 bmy_13624T0/1-364 PNPGKKFTAR GFPRHCYLPN NEKGRKVLRL LITAWERRLI FTIGTSNTTG ENSTTRP00000015824/1-619 PNPGKKFTAR GFPRHCYLPN NEKGRKVLRL LITAWERRLI FTIGTSNTTG ENSP00000257600/1-620 PNPGKKFTAR GFPRHCYLPN NEKGRKVLRL LITAWERRLI FTIGTSNTTG BACU003438/1-559 PNPGKKFTAR GFPRHCYLPN NEKGRKVLRL LITAWERRLI FTIGTSNTTG ENSBTAP00000022253/1-669 PNPGKKFTAR GFPRHCYLPN NEKGRKVLRL LITAWERRLI FTIGTSNTTG 651 700 bmy_13624T0/1-364 ESDTVVWNEI HHKTEFGSNL TGHGYPDASY LDNVLAELTA QGVSEAVAKA ENSTTRP00000015824/1-619 ESDTVVWNEI HHKTEFGSNL TGHGYPDASY LDNVLAELTA QGVSEAVAKA ENSP00000257600/1-620 ESDTVVWNEI HHKTEFGSNL TGHGYPDASY LDNVLAELTA QGVSEAAAKA BACU003438/1-559 ESDTVVWNEI HHKTEFGSNL TGHGYPDASY LDNVLAELTA QGVSEAVAKA ENSBTAP00000022253/1-669 ESDTVVWNEI HHKTEFGSNL TGHGYPDASY LDNVLAELTA QGVSEAVAKA