KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:41 2014 Check: 00 .. Name: bmy_08761T0/1-413 Len: 602 Check: 8156 Weight: 1.00 Name: BACU015483/1-477 Len: 602 Check: 3509 Weight: 1.00 Name: ENSP00000344724/1-506 Len: 602 Check: 2554 Weight: 1.00 Name: ENSTTRP00000012819/1-515 Len: 602 Check: 4143 Weight: 1.00 Name: ENSBTAP00000022257/1-379 Len: 602 Check: 8406 Weight: 1.00 // 1 50 bmy_08761T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU015483/1-477 ---------- ---------- ---------- ---------- --MSDGNPEL ENSP00000344724/1-506 MDVRLYPSAP AVGARPGAEP AGLAHLDYYH GGKFDGDSAY VGMSDGNPEL ENSTTRP00000012819/1-515 ---------- ---------- ---------- ---------- ---MQQNRTE ENSBTAP00000022257/1-379 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_08761T0/1-413 -MDTHLWAIH GEATAQSGPP PLSLVHTHAD VLV------- ---------- BACU015483/1-477 LSTSQTYNSQ NESNEDYEIP PITPPNLPEP SLLHLGDHEA GYHSLCHGLT ENSP00000344724/1-506 LSTSQTYNGQ SENNEDYEIP PITPPNLPEP SLLHLGDHEA SYHSLCHGLT ENSTTRP00000012819/1-515 AVAGAFSCCW GFCGMRLGFL LLTRRWCIAG VFQQKFDGES AYVG------ ENSBTAP00000022257/1-379 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_08761T0/1-413 ---------- ---------- --LSNSTCNL LFSQ------ ---------- BACU015483/1-477 PNGLLPAYSY QAMDLPAIMV SNMLAQDSHL LSGQLPT--- ---------- ENSP00000344724/1-506 PNGLLPAYSY QAMDLPAIMV SNMLAQDSHL LSGQLPT--- ---------- ENSTTRP00000012819/1-515 ---------- ---------- --MSDGNPEL LSTSQXXXXX XXXXXXXXXX ENSBTAP00000022257/1-379 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_08761T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU015483/1-477 ---------- ---------- ---------- ---------- ---------- ENSP00000344724/1-506 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012819/1-515 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000022257/1-379 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_08761T0/1-413 ---------- -------IQE MVHSEVAAYD SGRPGPLLGR PAMLASHMSA BACU015483/1-477 ---------- -------IQE MVHSEVAAYD SGRPGPLLGR PAMLASHMSA ENSP00000344724/1-506 ---------- -------IQE MVHSEVAAYD SGRPGPLLGR PAMLASHMSA ENSTTRP00000012819/1-515 XXXXXXXXXX XXXXXXXIQE MVHSEVAAYD SGRPGPLLGR PAMLANHMSA ENSBTAP00000022257/1-379 ---------- -------IQE MVHSEVAAYD SGRPGPLLGR PAMLASHMSA 251 300 bmy_08761T0/1-413 LSQSQLISQM GVRSGIAHSS PSPPGSKSAT PSPSSSTQEE ESEAHFKMSG BACU015483/1-477 LSQSQLISQM GVRSGIAHSS PSPPGSKSAT PSPSSSTQEE ESEAHFKMSG ENSP00000344724/1-506 LSQSQLISQM GIRSSIAHSS PSPPGSKSAT PSPSSSTQEE ESEVHFKISG ENSTTRP00000012819/1-515 LSQSQLISQM GVRSGIAHSS PSPPGSKSAT PSPSSSTQEE ESEAHFKMSG ENSBTAP00000022257/1-379 LSQSQLISQM GIRSGIAHSS PSPPGSKSAT PSPSSSTQEE ESEAHFKMSG 301 350 bmy_08761T0/1-413 EKRPSADPGR KAKNPKKKKK KDPNEPQKPV SAYALFFRDT QAAIKGQNPS BACU015483/1-477 EKRPSADPGR KAKNPKKKKK KDPNEPQKPV SAYALFFRDT QAAIKGQNPS ENSP00000344724/1-506 EKRPSADPGK KAKNPKKKKK KDPNEPQKPV SAYALFFRDT QAAIKGQNPS ENSTTRP00000012819/1-515 EKRPSADPGR KAKNPKKKKK KDPNEPQKPV SAYALFFRDT QAAIKGQNPS ENSBTAP00000022257/1-379 EKRPSADPGK KAKNPKKKKK KDPNEPQKPV SAYALFFRDT QAAIKGQNPS 351 400 bmy_08761T0/1-413 ATFGDVSKIV ASMWDSLGEE QKQAYKRKTE AAKKEYLKAL AAYRASLVSK BACU015483/1-477 ATFGDVSKIV ASMWDSLGEE QKQAYKRKTE AAKKEYLKAL AAYRASLVSK ENSP00000344724/1-506 ATFGDVSKIV ASMWDSLGEE QKQAYKRKTE AAKKEYLKAL AAYRASLVSK ENSTTRP00000012819/1-515 ATFGDVSKIV ASMWDSLGEE QKQAYKRKTE AAKKEYLKAL AAYRASLVSK ENSBTAP00000022257/1-379 ATFGDVSKIV ASMWDSLGEE QKQAYKRKTE AAKKEYLKAL AAYRASLVSK 401 450 bmy_08761T0/1-413 SSPDQGETKS TQANPPAKML PPKQPMYAMP GLASFLTPSD LQAFRSGASP BACU015483/1-477 SSPDQGETKS TQANPPAKML PPKQPMYAMP GLASFLTPSD LQAFRGGASP ENSP00000344724/1-506 SSPDQGETKS TQANPPAKML PPKQPMYAMP GLASFLTPSD LQAFRSGASP ENSTTRP00000012819/1-515 SSPDQGETKN TQANPPAKML PPKQPMYAMP GLASFLTPSD LQAFRSGASP ENSBTAP00000022257/1-379 SSPDQGETKS AQANPPAKML PPKQPMYAMP GLASFLTPSD LQAFRSGASP 451 500 bmy_08761T0/1-413 ASLARTLGSK SLLPGLSASP PPPPSFPLST PLHQQLPLPP HTQGTLLSPP BACU015483/1-477 ASLARTLGSK SLLPGLSASP PPPPSFPLST PLHQQLPLPP HTQGTLLSPP ENSP00000344724/1-506 ASLARTLGSK SLLPGLSASP PPPPSFPLSP TLHQQLSLPP HAQGALLSPP ENSTTRP00000012819/1-515 ASLARTLGSK SLLPGLSASP PPPPSFPLSS PLHQQLPLPP HTQGTLLSPP ENSBTAP00000022257/1-379 ASLARTLGSK SLLPSLSASP PPPPSFPLST PLHQQLPLPP HAQGTLLSPP 501 550 bmy_08761T0/1-413 VSMSPAPQPP ILPAPMAL-- ---------- -QDFPHISEF PSGSGSRSPG BACU015483/1-477 VSMSPAPQPP ILPAPMALQV QLAVSPSPPG PQDFPHISEF PSGSGSRSPG ENSP00000344724/1-506 VSMSPAPQPP VLPTPMALQV QLAMSPSPPG PQDFPHISEF PSSSGSCSPG ENSTTRP00000012819/1-515 VSMSPAPQPP ILPAPMALQV QLAVSPSPPG PQDFPHISEF PSGSGSRSPG ENSBTAP00000022257/1-379 VSMSPAPQPP VLPAPMALQV QLAVSPSPPG PQDFPHISEF PSSSGPRSPG 551 600 bmy_08761T0/1-413 PSNPTSSGDW DSSYPSGECG ISTCRSA--- LTPLAHPWCC XCPAYTWRVR BACU015483/1-477 PSNPTSSGDW DSSYPSGECG ISTCRSA--- LTPLAHPWCC PCPAYTWRVR ENSP00000344724/1-506 PSNPTSSGDW DSSYPSGECG ISTCSLL--- --PRDKSLYL T--------- ENSTTRP00000012819/1-515 PSNPTSSGDW DSSYPSGECG ISTCSLL--- --PRDKSLYL T--------- ENSBTAP00000022257/1-379 PSNPTSSGDW DSSYPSTECG VSTCRLCRGR PPPAASPKNL LEPPAP---- 601 650 bmy_08761T0/1-413 MG BACU015483/1-477 MG ENSP00000344724/1-506 -- ENSTTRP00000012819/1-515 -- ENSBTAP00000022257/1-379 --