KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:16:47 2014 Check: 00 ..
Name: ENSP00000321475/1-581 Len: 659 Check: 8408 Weight: 1.00
Name: ENSBTAP00000022279/1-580 Len: 659 Check: 4829 Weight: 1.00
Name: ENSTTRP00000005166/1-578 Len: 659 Check: 1964 Weight: 1.00
Name: bmy_08353T0/1-618 Len: 659 Check: 3089 Weight: 1.00
Name: BACU013225/1-116 Len: 659 Check: 1315 Weight: 1.00
//
1 50
ENSP00000321475/1-581 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000022279/1-580 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000005166/1-578 ---------- ---------- ---------- ---------- ----------
bmy_08353T0/1-618 IGESKVLTRE AFIQRVPGIP GKAWVYGFIW SKRWKLSGGT SRSRYRWMSL
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000321475/1-581 ---------- ---------- -------MDE ESLDGLLFKD HDFSSDLLRQ
ENSBTAP00000022279/1-580 ---------- ---------- -------MDT ESSEGLLFKD HDFSSDLLRQ
ENSTTRP00000005166/1-578 ---------- ---------- -------MDE ESPDGLLFKD HDFSSDLLRQ
bmy_08353T0/1-618 QQNKIVRRCY LPVTFESNHN QKERCHLMDE ESPDGLLFKD HDFSSDLLRQ
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
101 150
ENSP00000321475/1-581 LNSLRQSRIL TDVSICAGAR EIPCHRNVLA SSSPYFRAMF CSSFREKSEA
ENSBTAP00000022279/1-580 LNDLRQNRIL TDVSICAGSW EVPCHRNVLA SSSPYFRAMF CSNFRESREA
ENSTTRP00000005166/1-578 LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
bmy_08353T0/1-618 LNGLRQSRIL TDVSICAGAW EVPCHRNVLA SSSPYFRAMF CSNFRESSEP
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
151 200
ENSP00000321475/1-581 KVQLKGIDPP TLDQIVSYVY TGEAHIATDN VLPVMEAASM LQFPKLFEAC
ENSBTAP00000022279/1-580 KVQLKGVDAS TLERIVLYVY TGEVHITVES VLPLMEAASM LQYPKLLEAC
ENSTTRP00000005166/1-578 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XQYPRL-EDC
bmy_08353T0/1-618 KVQLKGLDSA TLERIILYVY TGEAHITAET VLPLMEAASM LQYPRLLEAC
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
201 250
ENSP00000321475/1-581 SSYLQSQLAP SNCLGMIRLS EILSCETLKK KAREVALTSF PEVAASADLK
ENSBTAP00000022279/1-580 SSFLQSQLTP SNCLGMTRLS EIFSCETLRK KAREVALTYF PEVAASADLK
ENSTTRP00000005166/1-578 SS--QSQLAP SNCLGMIRLS EI-SCETLRK KAREVVLTYF PEVAASADLK
bmy_08353T0/1-618 SSFLQSQLAP SNCLSVIRLS EIFSCETLRK KAREVALTYF PEVAASADLK
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
251 300
ENSP00000321475/1-581 ELCALELRDY LGDDGLCGEE EKVFEALMVW IKHDLQARKR YMQELFKQVR
ENSBTAP00000022279/1-580 ELCALELRDY LGDDGLCGEE EKVFEALMVW IKHDLQTRKR YMQDLFKQVR
ENSTTRP00000005166/1-578 ELWALELIDY LGDDGLCAEE EKVFEALMVW IKHDLQTRKQ YMQELFKQVR
bmy_08353T0/1-618 ELRALELRDY LGDDGLRAEE EKVFEALMVW IKHDLQTRKQ YMQELFKQVR
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
301 350
ENSP00000321475/1-581 LQYIHPAFFH HFIANDALLQ SSPACQIILE TAKRQMFSLC GTT-VPDCKL
ENSBTAP00000022279/1-580 LQYVHPAFFH HFIANDALLQ SSPPCQTILE TAKRQVFSLY STASSAGLQP
ENSTTRP00000005166/1-578 LQYVHPAFFY HFIANDALLQ SSPPCQTILE TAKRQIFSPY STTSAPGLQP
bmy_08353T0/1-618 LQYVHPAFFY HFIANDALLQ SSPPCQTILE TAKRQMFSLY GTTSAPDLQP
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
351 400
ENSP00000321475/1-581 LLHVPPRNSY QDFLILLGGR KDSQQTTRDV LLYSKQTGQW QSLAKLPTRL
ENSBTAP00000022279/1-580 LWHVPPRNSY QDFLILLGGR KDNQQTTRDV LLYDGQTSRW QSLAKLPARL
ENSTTRP00000005166/1-578 LWHVPPRNSY QDFLILLGGR KDNQQTTRDV LLYDGQTGQW QSLAKLPARL
bmy_08353T0/1-618 LWHVPPRNSY QDFLILLGGR KDNQQTTRDV LLYDGQTGQW QSLAKLPARL
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
401 450
ENSP00000321475/1-581 YKASAITLHR SIYVLGGMAV SSGRSLVSHN VYIFSLKLNQ WRLGEPMLVA
ENSBTAP00000022279/1-580 YKASAVSLHR SIYMLGGMAV --GKSVPSAK VYVFSLKLNQ WRPGQPMLAA
ENSTTRP00000005166/1-578 YKASAVTLHH SIYLLGGMAV DAGNSVPSPK VYIFSLKFNQ WRLGQPMLAA
bmy_08353T0/1-618 YKASAVTLHR SIYLLGGMAV GAGNSVPSPK VYIFSLKFNQ WRLGQPMLAA
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
451 500
ENSP00000321475/1-581 RYSHRSTAHK NFIFSIGGIG EGQELMGSME RYDSICNVWE SMASMPVGVL
ENSBTAP00000022279/1-580 RYSHRSAAHK NFIFSIGGIG EGHEVMGSVE RYDSVGNVWE RMASMPVGVL
ENSTTRP00000005166/1-578 RYSHRSTAHK NFIFSIGGIG DGQGVMGSME RYDSICNVWE RMASMPLGVL
bmy_08353T0/1-618 RYSHRSTTHK NFIFSIGGIG EGHEVMGSME RYDSICN--- ----------
BACU013225/1-116 ---------- ---------- ---------- ---------- ----------
501 550
ENSP00000321475/1-581 HPAVAVKDQR LYLFGGEDIM QNPVRLIQVY HISRNSWFKM ETRMIKNVCA
ENSBTAP00000022279/1-580 HPAVAVKDQR LYLFGGEDIM QNPVRLIQVY HISRNTWFKM ETRMIKNVCA
ENSTTRP00000005166/1-578 HPAVAVKDQR LYLFGGEDIM QNPVRLIQVY HISRNTWFKM ETRMIKNVCA
bmy_08353T0/1-618 ---------- ---------- --------VY HISRNTWFKM ETRMIKNVCA
BACU013225/1-116 ---------- ---------- ---------- ---------- ---MIKNVCA
551 600
ENSP00000321475/1-581 PAVVLGERIV IVGGYTRRIL AYDPQSNKFV KCADMKDRRM HHGATVMGNK
ENSBTAP00000022279/1-580 PAVVLGERIV IVGGYTRRIL AYDPQSNKFV KCADMKDRRM HHGATVMGNK
ENSTTRP00000005166/1-578 PAVVLGERIV IVGGYTRRIL AYDPQSNKFV KCADMKDRRM HHGATVMGNK
bmy_08353T0/1-618 PAVVLGERIV IVGGYTRRIL SYDPQSNKFV KCADMKDRRM HHGATVMGNK
BACU013225/1-116 PAVVLGERIV IVGGYTRRIL SYDPQSNKFV KCADMKDRRM HHGATVMGNK
601 650
ENSP00000321475/1-581 LYVTGGRRLT TDCNIEDSAS FDCYDPETDT WTSQGQLPHK LFDHACLTLQ
ENSBTAP00000022279/1-580 LYVTGGRRLT TDCSIEDSAS FDCYDPETDT WTSQGQLPHK LFDHACLTLQ
ENSTTRP00000005166/1-578 LYVTGGRHLT TDCSIEDSAS FDCYDPETDT WTSQGQLPHK LFDHACLTLR
bmy_08353T0/1-618 LYVTGGRHLT TDCSIEDSAS FDCYDPETDT WTSQGQLPHK LFDHACLTLR
BACU013225/1-116 LYVTGGRHLT TDCSIEDSAS FDCYDPETDT WTSEGQLPHK LFDHACLTLR
651 700
ENSP00000321475/1-581 CIPRTSGLP
ENSBTAP00000022279/1-580 CIPHHSTVP
ENSTTRP00000005166/1-578 CIPHPSTTP
bmy_08353T0/1-618 CIPHPSTIP
BACU013225/1-116 CIPHPSTIP