KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:16:48 2014  Check: 00 ..

 Name: ENSP00000292450/1-473     Len:    477  Check:  4509  Weight:  1.00
 Name: ENSBTAP00000022287/1-466  Len:    477  Check:  199  Weight:  1.00
 Name: ENSTTRP00000011675/1-473  Len:    477  Check:  6416  Weight:  1.00
 Name: bmy_13980T0/1-468         Len:    477  Check:  1452  Weight:  1.00
 Name: BACU012098/1-475          Len:    477  Check:  9481  Weight:  1.00

//


                          1                                                   50
ENSP00000292450/1-473     MMTKVLGMAP VLGPRPPQEQ VGPLMVKV-E EKEEKGKYLP SLEMFRQRFR 
ENSBTAP00000022287/1-466  -------MAT VLGPRPPQEQ -GPVIVKI-E EEEEKGKRLP -MEIFRQRFR 
ENSTTRP00000011675/1-473  MMTKVLGMAT VLGPRTPQEQ -GPVIVKV-- EEEEKGKRLP SLETFRQRFR 
bmy_13980T0/1-468         -------MAT VLGPRTPQEQ -GPVIVKVEE EEEEKGKRLP SLEMFRQRFR 
BACU012098/1-475          MMTKVLGMAT VLGPRTPQEQ -GPVIVKVEE EEEEKGKRLP SLEMFRQRFR 


                          51                                                 100
ENSP00000292450/1-473     QFGYHDTPGP REALSQLRVL CCEWLRPEIH TKEQILELLV LEQFLTILPQ 
ENSBTAP00000022287/1-466  QFGYHDTPGP REALSQLRVL CCEWLRPEIH TKEQILELLV LEQFLTILPQ 
ENSTTRP00000011675/1-473  QFGYHDTPGP REALSQLRVL CCEWLRPEIH TKEQILELLV LEQFLTILPQ 
bmy_13980T0/1-468         QFGYHDTPGP REALSQLRVL CCEWLRPEIH TKEQILELLV LEQFLTILPQ 
BACU012098/1-475          QFGYHDTPGP REALSQLRVL CCEWLRPEIH TKEQILELLV LEQFLTILPQ 


                          101                                                150
ENSP00000292450/1-473     ELQAWVQEHC PESAEEAVTL LEDLERELDE PGHQVSTPPN EQKPVWEKIS 
ENSBTAP00000022287/1-466  ELQAWVQEHC PESAEEAVTL LEDLERELDE PAPQVSPPPR EQKRSWEKMS 
ENSTTRP00000011675/1-473  ELQAWVQEHC PESAEEAVTL LEDLERELDE PAQQASPPPS EQKQWWEKMA 
bmy_13980T0/1-468         ELQAWVQEHC PESAEEAVTL LEDLERELDE PAQQASPPPS EQKQWWEKMA 
BACU012098/1-475          ELQAWVQEHC PESAEEAVTL LEDLERELDE PAQQASPPPS EQKQWWEKMA 


                          151                                                200
ENSP00000292450/1-473     SSGTAKESPS SMQPQPLETS HKYESWGPLY IQESGEEQEF AQDPRKVRDC 
ENSBTAP00000022287/1-466  PSGMAEESLS SPQLESVETS HRYESWGPLY IQETGEEEKF TPALRKVRDR 
ENSTTRP00000011675/1-473  SSGTVEESLS SPQPRSVETS YKYESWGPLY IQETGEEEDF TPELRKVQDR 
bmy_13980T0/1-468         SSGTVEESLS SPQPRSLETS YKYESWGPLY IQETGEEEDF TPELRKIQDR 
BACU012098/1-475          SSGTVEESLS SPQPRSLETS YKYESWGPLY IQETGEEEDF TPELRKIQDR 


                          201                                                250
ENSP00000292450/1-473     RLSTQHEESA DEQKGSE--- AEGLKGDIIS VIIANKPEAS LERQCVNLEN 
ENSBTAP00000022287/1-466  KSKTQNEEST DKEGSSEESH AEGFRRDTLP MIITDKCEAR LERQWVNPEK 
ENSTTRP00000011675/1-473  KSNTQNEEST DKQESSEEFH AEGFRRDSIP MIIANKCEAR LERQWVNLEK 
bmy_13980T0/1-468         KSNTQNEEST DKQESSEEFH AEGFRRDSIP MIIANKCEAR LERQWVNLEK 
BACU012098/1-475          KSNTQNEEST DKQESSEEFH TEGFRRDSIP MIIANKCEAR LERQWVNLEK 


                          251                                                300
ENSP00000292450/1-473     EKGTKPPLQE AGSKKGRESV PTKPTPGERR YICAECGKAF SNSSNLTKHR 
ENSBTAP00000022287/1-466  ERGTKTPLQD KGSAKGRE-V VTKPAPGERR YICAECGKAF SNSSNLTKHR 
ENSTTRP00000011675/1-473  GRGTKIPLQD KGPSKGRE-V MTKPAPAERR YICAECGKAF SNSSNLTKHR 
bmy_13980T0/1-468         GRGTKIPLQD KGSSKGRE-V MTKPAPAERR YICAECGKAF SNSSNLTKHR 
BACU012098/1-475          GRGTKIPLQD KGSSKGRE-V MTKPAPAERR YICAECGKAF SNSSNLTKHR 


                          301                                                350
ENSP00000292450/1-473     RTHTGEKPYV CTKCGKAFSH SSNLTLHYRT HLVDRPYDCK CGKAFGQSSD 
ENSBTAP00000022287/1-466  RTHTGEKPYV CTKCGKAFSH SSNLTLHYRT HLVDRPYDCK CGKAFGQSSD 
ENSTTRP00000011675/1-473  RTHTGEKPYV CTKCGKAFSH SSNLTLHYRT HLVDRPYDCK CGKAFGQSSD 
bmy_13980T0/1-468         RTHTGEKPYV CTKCGKAFSH SSNLTLHYRT HLVDRPYDCK CGKAFGQSSD 
BACU012098/1-475          RTHTGEKPYV CTKCGKAFSH SSNLTLHYRT HLVDRPYDCK CGKAFGQSSD 


                          351                                                400
ENSP00000292450/1-473     LLKHQRMHTE EAPYQCKDCG KAFSGKGSLI RHYRIHTGEK PYQCNECGKS 
ENSBTAP00000022287/1-466  LLKHQRMHTE EAPYQCKDCG KAFSGKGSLI RHYRIHTGEK PYQCNECGKS 
ENSTTRP00000011675/1-473  LLKHQRMHTE EAPYQCKDCG KAFSGKGSLI RHYRIHTGEK PYQCNECGKS 
bmy_13980T0/1-468         LLKHQRMHTE EAPYQCKDCG KAFSGKGSLI RHYRIHTGEK PYQCNECGKS 
BACU012098/1-475          LLKHQRMHTE EAPYQCKDCG KAFSGKGSLI RHYRIHTGEK PYQCNECGKS 


                          401                                                450
ENSP00000292450/1-473     FSQHAGLSSH QRLHTGEKPY KCKECGKAFN HSSNFNKHHR IHTGEKPYWC 
ENSBTAP00000022287/1-466  FSQHAGLSSH QRLHTGEKPY KCKECGKAFN HSSNFNKHHR IHTGEKPYWC 
ENSTTRP00000011675/1-473  FSQHAGLSSH QRLHTGEKPY KCKECGKAFN HSSNFNKHHR IHTGEKPYWC 
bmy_13980T0/1-468         FSQHAGLSSH QRLHTGEKPY KCKECGKAFN HSSNFNKHHR IHTGEKPYWC 
BACU012098/1-475          FSQHAGLSSH QRLHTGEKPY KCKECGKAFN HSSNFNKHHR IHTGEKPYWC 


                          451                                                500
ENSP00000292450/1-473     HHCGKTFCSK SNLSKHQRVH TGEGEAP 
ENSBTAP00000022287/1-466  SDCGKTFCSK SNLSKHQKVH IVEGEGS 
ENSTTRP00000011675/1-473  NNCGKTFCSK SNLSKHQRVH TAEGEGP 
bmy_13980T0/1-468         NNCGKTFCSK SNLSKHQRVH TAEGEGP 
BACU012098/1-475          NNCGKTFCSK SNLSKHQRVH TAEGEGP