KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:48 2014 Check: 00 .. Name: ENSP00000231790/1-756 Len: 769 Check: 6494 Weight: 1.00 Name: ENSBTAP00000022288/1-758 Len: 769 Check: 5601 Weight: 1.00 Name: ENSTTRP00000014108/1-689 Len: 769 Check: 2833 Weight: 1.00 Name: bmy_15540T0/1-522 Len: 769 Check: 6509 Weight: 1.00 Name: BACU014633/1-723 Len: 769 Check: 3822 Weight: 1.00 // 1 50 ENSP00000231790/1-756 MSFVAGVIRR LDETVVNRIA AGEVIQRPAN AIKEMIENCL DAKSTSIQVI ENSBTAP00000022288/1-758 MSLVAGVIRR LDETVVNRIA AGEVIQRPAN AIKEMIENCL DAKSTSIQVV ENSTTRP00000014108/1-689 ---------- ---------- ---------- ---------- ---------- bmy_15540T0/1-522 MSLVAGVIRR LDETVVNRIA AGEVIQRPAN AIKEMIENCL DAKSTSIQVV BACU014633/1-723 MSLVAGVIRR LDETVVNRIA AGEVIQRPAN AIKEMIENCL DAKSTSIQVV 51 100 ENSP00000231790/1-756 VKEGGLKLIQ IQDNGTGIRK EDLDIVCERF TTSKLQSFED LASISTYGFR ENSBTAP00000022288/1-758 VKEGGLKLIQ IQDNGTGIRK EDLEIVCERF TTSKLQSFED LAHISTYGFR ENSTTRP00000014108/1-689 ---------- ---------K EDLEIVCERF TTSKLQSFED LAHISTYGFR bmy_15540T0/1-522 IKEGGLKLIQ IQDNGTGIRK EDLEIVCERF TTSKLQSFED LAHISTYGFR BACU014633/1-723 IKEGGLKLIQ IQDNGTGIRK EDLEIVCERF TTSKLQSFED LAHISTYGFR 101 150 ENSP00000231790/1-756 GEALASISHV AHVTITTKTA DGKCAYRASY SDGKLKAPPK PCAGNQGTQI ENSBTAP00000022288/1-758 GEALASISHV AHVTITTKTA DGKCAYRAHY SDGKLKAPPK PCAGNQGTQI ENSTTRP00000014108/1-689 GEALASISHV AHVSITTKTA DGKCAYRAHY SDGKLKAPPK PCAGNQGTQI bmy_15540T0/1-522 GEALASISHV AHVSITTKTA DGKCAYRAYY SDGKLKAPPK PCAGNQGTQI BACU014633/1-723 GEALASISHV AHVSITTKTA DGKCAYRAYY SDGKLKAPPK PCAGNQGTQI 151 200 ENSP00000231790/1-756 TVEDLFYNIA TRRKALKNPS EEYGKILEVV GRYSVHNAGI SFSVKKQGET ENSBTAP00000022288/1-758 TVEDLFYNIS TRRKALKNPS EEYGKILEVV GRYAVHNSGI GFSVKKQGET ENSTTRP00000014108/1-689 TVEDLFYNIS TRRKALKNPS EEYGKILEVV GRYSIHNSGI SFSVKKQGET bmy_15540T0/1-522 TVEDLFYNIS TRRKALKNPS EEYGKILEVV GRYSVHNSGI SFSVKKQGET BACU014633/1-723 TVEDLFYNIS TRRKALKNPS EEYGKILEVV GRYSVHNSGI SFSVKKQGET 201 250 ENSP00000231790/1-756 VADVRTLPNA STVDNIRSIF GNAVSRELIE IGCEDKTLAF KMNGYISNAN ENSBTAP00000022288/1-758 VADVRTLPNA TTVDNIRSIF GNAVSRELIE VECEDKTLAF KMNGYISNAN ENSTTRP00000014108/1-689 VADVRTLPNA TTVDNIRSIF GNAVSRELIE VGCEDKTLAF KMNGYISNAN bmy_15540T0/1-522 VADVRTLPNA TTVDNIRSIF GNAVSRELIE VGCEDKTLAF KMNGYISNAN BACU014633/1-723 VADVRTLPNA TTVDNIRSIF GNAVSRELIE VGCEDKTLAF KMNGYISNAN 251 300 ENSP00000231790/1-756 YSVKKCIFLL FINHRLVEST SLRKAIETVY AAYLPKNTHP FLYLSLEISP ENSBTAP00000022288/1-758 YSVKKCIFLL FINHRLVESA SLRKAIETVY AAYLPKSTHP FLYLSLEISP ENSTTRP00000014108/1-689 YSVKKCIFLL FINHRLVEST SLRKAIETVY AAYLPKNTHP FLYLSLEISP bmy_15540T0/1-522 YSVKKCIFLL FINHRLVESA SLRKAIEMVY AAYLPKNTHP FLYLSLEISP BACU014633/1-723 YSVKKCIFLL FINHRLVESA SLRKAIETVY AAYLPKNTHP FLYLSLEISP 301 350 ENSP00000231790/1-756 QNVDVNVHPT KHEVHFLHEE SILERVQQHI ESKLLGSNSS RMYFTQTLLP ENSBTAP00000022288/1-758 QNVDVNVHPT KHEVHFLHED SILERLQQHI ESRLLGSNAS RTYFTQTLLP ENSTTRP00000014108/1-689 QNVDVNVHPT KHEVHFLHED SILERVQQHV ESRLLGSNAS RTYFTQTLLP bmy_15540T0/1-522 QNVDVNVHPT KHEVHFLHED SILERVQQHI ESRLLGSNAS RTYFTQTLLP BACU014633/1-723 QNVDVNVHPT KHEVHFLHED SILERVQQHI ESRLLGSNAS RTYFTQTLLP 351 400 ENSP00000231790/1-756 GLAGPSGEMV KSTTSLTSSS TSGSSDKVYA HQMVRTDSRE QKLDAFLQPL ENSBTAP00000022288/1-758 GLPGPSGEAV KSTASVTSSS TAGSGDRVYA HQMVRTDCRE QKLDAFLQPV ENSTTRP00000014108/1-689 GLTGPSGEVV KSTTGVTLSS TAGSGDKVYA HQMVRTDCRE QKLDAFVQPV bmy_15540T0/1-522 GLTGPSGEVV KSTTGVTLSS TAGSGDKVYA HQMVRTDCRE QKLDAFLQPV BACU014633/1-723 GLTGPSGEVV KSTTGVTLSS TAGSGDKVYA HQMVRTDCRE QKLDAFLQP- 401 450 ENSP00000231790/1-756 SKPLSSQPQA IVTEDKTDIS SGRARQQDEE MLELPAPAEV AAKNQSLEGD ENSBTAP00000022288/1-758 SKALSSQPQA VVPEHRTDAS SSGTRQQDEE MLELPAPAAV AAKSQALEDD ENSTTRP00000014108/1-689 SKALSSQPQA VVVEDRTAAS SSGARQQDEE MLELSAPAEV AAKNQGLEED bmy_15540T0/1-522 SKALSSQPQA VVLEDRTAAS NSGARQQDEE MLELSAPAEV AAENQGLEED BACU014633/1-723 ---------- ---------- ---------- ---------- -----GLEED 451 500 ENSP00000231790/1-756 TTKGTSEMSE KRGPTSS--N PRKRHREDSD VEMVEDDSRK EMTAACTPRR ENSBTAP00000022288/1-758 ATMRAADLAE KRGPSSSPEN PRKRPREDSD VEMVEDASRK EMTAACTPRR ENSTTRP00000014108/1-689 AAKRTADSSE KRGPSSSPEN PRKRHREGSD LEMVEDASQK EMTAACTPRR bmy_15540T0/1-522 ATKRTADSSE KRGPSSSPEN PRKRHREDSD VEMVEDASRK EMTAACTPRR BACU014633/1-723 ATKRTADSSE KRGPSSSPEN PRKRHRENSD VEMVEDASRK EMTAACTPRR 501 550 ENSP00000231790/1-756 RIINLTSVLS LQEEINEQGH EVLREMLHNH SFVGCVNPQW ALAQHQTKLY ENSBTAP00000022288/1-758 RIINLTSVLS LQEEINERGH ETLREMLHNH SFVGCVNPQW ALAQHQTKLY ENSTTRP00000014108/1-689 RIINLTSILS LQEEISERGH ETLREVLRNH SFVGCVNPQW ALAQHQTKLY bmy_15540T0/1-522 RIMNLTSILS LQEEISERGH ES-------- ---------- ---------- BACU014633/1-723 RIINLTSILS LQEEISEQGH ETLREVLRNH SFVGCVNPQW ALAQHQTKLY 551 600 ENSP00000231790/1-756 LLNTTKLSEE LFYQILIYDF ANFGVLRLSE PAPLFDLAML ALDSPESGWT ENSBTAP00000022288/1-758 LLNTTRLSEE LFYQILVYDF ANFGVLRLSE PAPLFDLAML ALDSPESGWT ENSTTRP00000014108/1-689 LLNTTKLSEE LFYQILIYDF ANFGVLRLSE PAPLFDLAML ALDSPESGWT bmy_15540T0/1-522 ---------- ---------- ---------- ---------- ---------- BACU014633/1-723 LLNTTKLSEE LFYQILIYDF ANFGVLRLSE PAPLFDLAML ALDSPESGWT 601 650 ENSP00000231790/1-756 EEDGPKEGLA EYIVEFLKKK AEMLADYFSL EIDEEGNLIG LPLLIDNYVP ENSBTAP00000022288/1-758 EEDGPKEGLA EYIVEFLKKK AEMLADYFSL EIDEEGNLVG LPLLIDNYVP ENSTTRP00000014108/1-689 EEDGPKEGLA EYIVEFLKKK AEMLADYFSL EIDEEGNLVG LPLLIDNYVP bmy_15540T0/1-522 ---------- ---------- ---------- ---------- ---------- BACU014633/1-723 EEDGPKEGLA EYIVEFLKKK AEMLADYFSL EIDEEGNLVG LPLLIDNYVP 651 700 ENSP00000231790/1-756 PLEGLPIFIL RLATE----- ------VNWD EEKECFESLS KECAMFYSIR ENSBTAP00000022288/1-758 PLEGLPIFIL RLATE----- ------VNWD EEKECFESLS KECAMFYSIR ENSTTRP00000014108/1-689 PLEGLPIFIL RLATE----- ------VNWD DEKECFESLG KECAMFYSIR bmy_15540T0/1-522 ---------- ---------- ---------- ---------- ---------- BACU014633/1-723 PLEGLPIFIL RLATEASDGA GPDDSPVNWD DEKACFESLG KECAMFYSIR 701 750 ENSP00000231790/1-756 KQYISEESTL SGQQSEVPGS IPNSWKWTVE HIVYKALRSH ILPPKHFTED ENSBTAP00000022288/1-758 KQYVSAESTL SGQQSEVPGS TANPWKWTVE HVIYKAFRSH LLPPKHFTED ENSTTRP00000014108/1-689 KQYVSEESTL SGQQSEVPSS TPNPWKWTVE HVVYKAFRSH LLPPKHFTED bmy_15540T0/1-522 ---------- ---------- ---------- ---------- ---------- BACU014633/1-723 KQYVSEESTL SGQQSEVPSS TPNPWKWTVE HVVYKAFHSH LLPPKHFTED 751 800 ENSP00000231790/1-756 GNILQLANLP DLYKVFERC ENSBTAP00000022288/1-758 GNILQLANLP DLYKVFERC ENSTTRP00000014108/1-689 GNILQLANLP DLYKVFERC bmy_15540T0/1-522 ---------- --------- BACU014633/1-723 GNILQLANLP DLYKVFERC