KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:54 2014 Check: 00 .. Name: bmy_04456T0/1-473 Len: 833 Check: 3550 Weight: 1.00 Name: ENSP00000386766/1-831 Len: 833 Check: 2861 Weight: 1.00 Name: ENSBTAP00000022316/1-833 Len: 833 Check: 5077 Weight: 1.00 Name: BACU020576/1-833 Len: 833 Check: 4782 Weight: 1.00 Name: ENSTTRP00000016470/1-832 Len: 833 Check: 1633 Weight: 1.00 // 1 50 bmy_04456T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSP00000386766/1-831 MKVHMHTKFC LICLLTFIFH HCNHCHEEHD HGPEALHRQH RGMTELEPSK ENSBTAP00000022316/1-833 MKVHMHTKFC LICLLTFIFH HCNHCHEEHD HGSEEHHRHH RGMTESESSE BACU020576/1-833 MKVHMHTKFC LICLLTFIFH HCNHCHEEHD HGSEEHHRHH RGMTESESSK ENSTTRP00000016470/1-832 MKVHMHTKFC LICLLTFIFH HCNHCHEEHD HGSEEHHRHH RGMTESESSK 51 100 bmy_04456T0/1-473 ---------- ----MTFTQK YNENGAL--- ---------- ---------- ENSP00000386766/1-831 FSKQAAENEK KYYIEKLFER YGENGRLSFF GLEKLLTNLG LGERKVVEIN ENSBTAP00000022316/1-833 FSVLDAENEK KYYIEKLFDR YGENGRLSFF GLEKLLTNLG LGEIKVVEIN BACU020576/1-833 FSVLDAENEK KYYIEKLFDR YGENGRLSFF GLEKLLTNLG LGEIKVVEIN ENSTTRP00000016470/1-832 FSVLDAENEK KYYIEKLFDR YGENGRLSFF GLEKLLTNLG LGEIKVVEIN 101 150 bmy_04456T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSP00000386766/1-831 HEDLGHDHVS HLDILAVQEG KHFHSHNHQH SHNHLNSENQ TVTSVSTKRN ENSBTAP00000022316/1-833 HEDLGHDHVS HLDILAVQEG KHFHSHNHQH SHNHLNSENQ TVTSVSAKRN BACU020576/1-833 HEDLGHDHVS HLDILAVQEG KHFHSHNHQH SHNHLNSENQ TVTSVSTKRS ENSTTRP00000016470/1-832 HEDLGHDHVS HLDILAVQEG KHFHSHNHQH SHSHLNSENQ TVTSVSTKRS 151 200 bmy_04456T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSP00000386766/1-831 HKCDPEKETV EVSVKSDDKH MHDHNHRLRH HHRLHHHLDH NNTHHFHNDS ENSBTAP00000022316/1-833 RKCDPEKETI EVSVKSDDKH MHDHSHRLCH HHCLRHHLDH NTTRHFPNDS BACU020576/1-833 HKCDPEKETI EVSVKSDDKH MHDHNHRLCH HHCLRHHLDH NTTRHFPNDS ENSTTRP00000016470/1-832 HKCDPEKETI EVSVKSDDKH MHDRNHRLCH HHCLRHHLDH NTTRHFPNDS 201 250 bmy_04456T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSP00000386766/1-831 ITPSERGEPS NEPSTETNKT QEQSDVKLPK GKRKKKGRKS NENSEVITPG ENSBTAP00000022316/1-833 ITHSEHGEPS HEPSTETNKT QEQSESKLPK GKRKRKEKKS NENSGVITPG BACU020576/1-833 IIHSEHGEPS HEPSTETNKT QEQSESKLLK GKKKRKGKKS NENSEVITPG ENSTTRP00000016470/1-832 IIHSEHGEPS HEPSTETNKT QEQSESKLLK GKKKRKGKKS NENSEVITPG 251 300 bmy_04456T0/1-473 -----EVGQY YDLGLIH--- ---------- ---------- ---------- ENSP00000386766/1-831 FPPNHDQGEQ YEHNRVHKPD RVHNPGHSHV HLPERNGHDP GRGHQDLDPD ENSBTAP00000022316/1-833 FPSNHDQGEQ YEHNRVHKPD RVHNPGHSHV RLPEHNGHDP GHGHQDLDPD BACU020576/1-833 FPPNHDQGEQ YEHNRVHKPD RVHNPGHFHV RLPEHNGHDP GHGHQDLDPD ENSTTRP00000016470/1-832 FPPNHDQGEQ YEHNRVHKPD RVHNPGHFHV RLPEHNGHDP GHGHQDLDPD 301 350 bmy_04456T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSP00000386766/1-831 NEGELRHTRK REAPHVKNNA IISL--RKDL NEDDHHHECL NVTQLLKYYG ENSBTAP00000022316/1-833 IEGELRHTRK REAPHVKKSA IYSAASHKDH NEDDRQHECL NVTQLLKYHG BACU020576/1-833 SEGELRHTRK REAPHVKKSA IYSAASHKDH NEDDRQHECL NVTQLLKYYG ENSTTRP00000016470/1-832 NEGELRHTRK REAPHVKKSA IYAAASHKDH NEDDRQHECL NVTQLLKYYG 351 400 bmy_04456T0/1-473 -----AINRN FFGLYCHT-- ---------- ---------- NVDHYFLP-- ENSP00000386766/1-831 HGANSPISTD LFTYLCPALL YQIDSRLCIE HFDKLLVEDI NKDKNLVPED ENSBTAP00000022316/1-833 HRANSPISSD LFTYLCPALL YQIDSRLCIE HFDKLLVEDL NKDKNQVPED BACU020576/1-833 HRANSPISPD LFTYLCPALL YQIDSRLCIE HFDKLLVEDL NKDKNLVPED ENSTTRP00000016470/1-832 HRANSPISPD LFTYLCPALL YQIDSRLCIE HFDRLLVEDL NKDKNLVPED 401 450 bmy_04456T0/1-473 ------TAWI CGIISITVIS LLSLLGVILV PIINQGCFKF LLTFLVALAV ENSP00000386766/1-831 EANIGASAWI CGIISITVIS LLSLLGVILV PIINQGCFKF LLTFLVALAV ENSBTAP00000022316/1-833 KANIGASAWI CGIISITVIS LLSLLGVILV PIINQGCFKF LLTFLVALAV BACU020576/1-833 KANIGASAWI CGIISITVIS LLSLLGVILV PIINQGCFKF LLTFLVALAV ENSTTRP00000016470/1-832 KANIGASAWI CGIISITVIS LLSLLGVILV PIINQGCFKF LLTFLVALAV 451 500 bmy_04456T0/1-473 GTMSGDALLH LLPHSQGGHD HSHQHAHGHG HSHGHESKKF LEEYDAVLKG ENSP00000386766/1-831 GTMSGDALLH LLPHSQGGHD HSHQHAHGHG HSHGHESNKF LEEYDAVLKG ENSBTAP00000022316/1-833 GTMSGDALLH LLPHSQGGHD HSHQHAHGHG HSHGHESKKF LEEYDAVLKG BACU020576/1-833 GTMSGDALLH LLPHSQGGHD HSHQHAHGHG HSHGHESKKF LEEYDAVLKG ENSTTRP00000016470/1-832 GTMSGDALLH LLPHSQGGHD HSHQHAHGHG HSHGHESKKF LEEYDAVLKG 501 550 bmy_04456T0/1-473 LVALGGIYLL FIIEHCIRMF KHYKQQRGKQ KWFMKQNTEE SAIGRKLSDH ENSP00000386766/1-831 LVALGGIYLL FIIEHCIRMF KHYKQQRGKQ KWFMKQNTEE STIGRKLSDH ENSBTAP00000022316/1-833 LVALGGIYLL FIIEHCIRMF KHYKQQRGKE KWFMKQNTEE SAIGRKLSDH BACU020576/1-833 LVALGGIYLL FIIEHCIRMF KHYKQQRGKQ KWFMKQNTEE SAIGRKLSDH ENSTTRP00000016470/1-832 LVALGGIYLL FIIEHCIRMF KHYKQQRGKQ KWFMKQNTEE SAIGRKLSDH 551 600 bmy_04456T0/1-473 KLNNTPDADW LQLKPLAGTD DSVVSEDRLN ETELTDLEGQ QESPPKNYLC ENSP00000386766/1-831 KLNNTPDSDW LQLKPLAGTD DSVVSEDRLN ETELTDLEGQ QESPPKNYLC ENSBTAP00000022316/1-833 KLNNTPDADW LQLKPLAGTD DSVVSEDRLN ETELTDLEGQ QESPPKNYLR BACU020576/1-833 KLNNTPDADW LQLKPLAGTD DSVVSEDRLN ETELTDLEGQ QESPPKNYLC ENSTTRP00000016470/1-832 KLNNTPDADW LQLKPLAGTD DSVVSEDRLN ETELTDLEGQ QESPPKNYLC 601 650 bmy_04456T0/1-473 VEEEKIMAHS HSDGLHAIHE HDLHAAAHNH RDESKTVLRK HNHQWHHKHS ENSP00000386766/1-831 IEEEKIIDHS HSDGLHTIHE HDLHAAAHNH HGENKTVLRK HNHQWHHKHS ENSBTAP00000022316/1-833 IEEEKIMDHS HSDGMHAIHE HDLHAAAHNH HDESKTVLRK HNHQWHHKHS BACU020576/1-833 VEEEKIMAHS HSDGLHAIHE HDLHAAAHNH RDESQTVLRK HNHQWHHKHS ENSTTRP00000016470/1-832 IEEEKIMAHS QSDGLHAIHE HDLHAAAHNH HDESKTVLRK HNHQWHHKHS 651 700 bmy_04456T0/1-473 HHSHGPCHSG SDLKETGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG ENSP00000386766/1-831 HHSHGPCHSG SDLKETGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG ENSBTAP00000022316/1-833 HHSHGPCHSG SDLKETGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG BACU020576/1-833 HHSHGPCHSG SDLKETGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG ENSTTRP00000016470/1-832 HHSHGPCHSG SDLKETGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG 701 750 bmy_04456T0/1-473 GISTSIAVFC HELPHELGDF AVLLKAGMTV KQAIVYNLLS AMMAYIGMLI ENSP00000386766/1-831 GISTSIAVFC HELPHELGDF AVLLKAGMTV KQAIVYNLLS AMMAYIGMLI ENSBTAP00000022316/1-833 GISTSIAVFC HELPHELGDF AVLLKAGMTV KQAIVYNLLS AMMAYIGMLI BACU020576/1-833 GISTSIAVFC HELPHELGDF AVLLKAGMTV KQAIVYNLLS AMMAYVGMLI ENSTTRP00000016470/1-832 GISTSIAVFC HELPHELGDF AVLLKAGMTV KQAIVYNLLS AMMAYIGMLI 751 800 bmy_04456T0/1-473 GTAVGQYANN ITLWIFAITA GMFLYVALVD MLPEMLHGDG DNEEHGFCPV ENSP00000386766/1-831 GTAVGQYANN ITLWIFAVTA GMFLYVALVD MLPEMLHGDG DNEEHGFCPV ENSBTAP00000022316/1-833 GTAVGQYANN ITLWIFAITA GMFLYVALVD MLPEMLHGDG DNEEHGFCPV BACU020576/1-833 GTAVGQYANN ITLWIFAITA GMFLYVALVD MLPEMLHGDG DNEEHGFCPV ENSTTRP00000016470/1-832 GTAVGQYANN ITLWIFAITA GMFLYVALVD MLPEMLHGDG DNEEHGFCPV 801 850 bmy_04456T0/1-473 GQFILQNLGL LFGFAIMLVI ALYEDKIVFD LQF ENSP00000386766/1-831 GQFILQNLGL LFGFAIMLVI ALYEDKIVFD IQF ENSBTAP00000022316/1-833 GQFILQNLGL LFGFAIMLVI ALYEDKIVFD LQF BACU020576/1-833 GQFILQNLGL LFGFAIMLVI ALYEDKIVFD LQF ENSTTRP00000016470/1-832 GQFI-QNLGL LFGFAIMLVI ALYEDKIVFD LQF