KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:02 2014 Check: 00 .. Name: ENSTTRP00000014853/1-1073 Len: 1174 Check: 4247 Weight: 1.00 Name: ENSP00000324857/1-1073 Len: 1174 Check: 3409 Weight: 1.00 Name: ENSBTAP00000022349/1-1073 Len: 1174 Check: 279 Weight: 1.00 Name: BACU003227/1-1076 Len: 1174 Check: 2254 Weight: 1.00 Name: bmy_17421T0/1-1111 Len: 1174 Check: 4658 Weight: 1.00 // 1 50 ENSTTRP00000014853/1-1073 ---------- ---------- ---------- ---------- ---------- ENSP00000324857/1-1073 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022349/1-1073 ---------- ---------- ---------- ---------- ---------- BACU003227/1-1076 METNKEESIL HEPLLRRREA FCSREGAAAR VGSRWQGDGE AEAKWDFCGG bmy_17421T0/1-1111 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014853/1-1073 ---------M RFFLLCAYML LLMISQLRAV SFPEDDEPLN TVDYHYSRQY ENSP00000324857/1-1073 ---------M RVFLLCAYIL LLMVSQLRAV SFPEDDEPLN TVDYHYSRQY ENSBTAP00000022349/1-1073 ---------M RFFLLCAYML LLLISQLRAV SFPEDDEPLN TVDYHYSRQY BACU003227/1-1076 AALISSWPTM RFFLLCAYML LLMISQLRAV SFPEDDEPLN TVDYHYSRQY bmy_17421T0/1-1111 ---------M RFFLLCAYML LLMISQLRAV SFPEDDEPLN TVDYHYSRQY 101 150 ENSTTRP00000014853/1-1073 PVFRGRPSGN ESQHRLDFQL MLKIRDTLYI AGRDQVYTVN LNEIPKTEVI ENSP00000324857/1-1073 PVFRGRPSGN ESQHRLDFQL MLKIRDTLYI AGRDQVYTVN LNEMPKTEVI ENSBTAP00000022349/1-1073 PVFRGRPSGN ESQHRLDFQL MLKIRDTLYI AGRDQVYTVN LNEIPKTEVI BACU003227/1-1076 PVFRGRPSGN ESQHRLDFQL MLKIRDTLYI AGRDQVYTVN LNEIPKTEVI bmy_17421T0/1-1111 PVFRGRPSGN ESQHRLDFQL MLKIRDTLYI AGRDQVYTVN LNEIPKTEVI 151 200 ENSTTRP00000014853/1-1073 PNKKLTWRSR QQDRENCAMK GKHKEECHNF IKVFVPRNDE MVFVCGTNAF ENSP00000324857/1-1073 PNKKLTWRSR QQDRENCAMK GKHKDECHNF IKVFVPRNDE MVFVCGTNAF ENSBTAP00000022349/1-1073 PNKKLTWRSR QQDRENCAMK GKHKDECHNF IKVFVPRNDE MVFVCGTNAF BACU003227/1-1076 PNKKLTWRSR QQDRENCAMK GKHKDECHNF IKVFVPRNDE MAFVCGTNAF bmy_17421T0/1-1111 PNKKLTWRSR QQDRENCAMK GKHKDECHNF IKVFVPRNDE MVFVCGTNAF 201 250 ENSTTRP00000014853/1-1073 NPMCRYYRLN TLEYDGEEIS GLARCPFDAR QTNVALFADG KLYSATVADF ENSP00000324857/1-1073 NPMCRYYRLS TLEYDGEEIS GLARCPFDAR QTNVALFADG KLYSATVADF ENSBTAP00000022349/1-1073 NPMCRYYKLN TLEYDGEEIS GLARCPFDAR QTNVALFADG KLYSATVADF BACU003227/1-1076 NPMCRYYRLN TLEYDGEEIS GLARCPFDAR QTNVALFADG KLYSATVADF bmy_17421T0/1-1111 NPMCRYYRLN TLEYDGEEIS GLARCPFDAR QTNVALFADG KLYSATVADF 251 300 ENSTTRP00000014853/1-1073 LASDAVIYRS MGDGSALRTI KYDSKWIK-- --------EP HFLHAIEYGN ENSP00000324857/1-1073 LASDAVIYRS MGDGSALRTI KYDSKWIK-- --------EP HFLHAIEYGN ENSBTAP00000022349/1-1073 LASDAVIYRS MGDGSALRTI KYDSKWIK-- --------EP HFLHAIEYGN BACU003227/1-1076 LASDAVIYRS MGDGSALRTI KYDSKWIK-- --------EP HFLHAIEYGN bmy_17421T0/1-1111 LASDAVIYRS MGDGSALRTI KYDSKWIKGT SLFSISLSEP HFLHAIEYGN 301 350 ENSTTRP00000014853/1-1073 YVYFFFREIA VEHNNLGK-- ---------- ---------- ---------- ENSP00000324857/1-1073 YVYFFFREIA VEHNNLGK-- ---------- ---------- ---------- ENSBTAP00000022349/1-1073 YVYFFFREIA VEHNNLGK-- ---------- ---------- ---------- BACU003227/1-1076 YVYFFFREIA VEHNNLGK-- ---------- ---------- ---------- bmy_17421T0/1-1111 YVYFFFREIA VEHNNLGKAT CFIPPLSGSF LFLFFLHAHN PVALLLSRGQ 351 400 ENSTTRP00000014853/1-1073 AVYSRVARIC KNDMGGSQRV LEKHWTSFLK ARLNCSVPGD SFFYFDVLQS ENSP00000324857/1-1073 AVYSRVARIC KNDMGGSQRV LEKHWTSFLK ARLNCSVPGD SFFYFDVLQS ENSBTAP00000022349/1-1073 AVYSRVARIC KNDMGGSQRV LEKHWTSFLK ARLNCSVPGD SFFYFDVLQS BACU003227/1-1076 AVYSRVARIC KNDMGGSQRV LEKHWTSFLK ARLNCSVPGD SFFYFDVLQS bmy_17421T0/1-1111 AVYSRVARIC KNDMGGSQRV LEKHWTSFLK ARLNCSVPGD SFFYFDVLQS 401 450 ENSTTRP00000014853/1-1073 VTDIIQINGV PTVVGVFTTQ LNSIPGSAVC AFSMDDIEKV FRGRFKEQKT ENSP00000324857/1-1073 ITDIIQINGI PTVVGVFTTQ LNSIPGSAVC AFSMDDIEKV FKGRFKEQKT ENSBTAP00000022349/1-1073 ITDIIQINGI PTVVGVFTTQ LNSIPGSAVC AFSMDDIEKV FKGRFKEQKT BACU003227/1-1076 VTDIIQINGI PTVVGVFTTQ LNSIPGSAVC AFSMDDIEKV FRGRFKEQKT bmy_17421T0/1-1111 VTDIIQINGI PTVVGVFTTQ LNSIPGSAVC AFSMDDIEKV FRGRFKEQKT 451 500 ENSTTRP00000014853/1-1073 PDSVWTAVPE DKVPKPRPGC CAKHGLAEAY KTSIDFPDET LSFIKSHPLM ENSP00000324857/1-1073 PDSVWTAVPE DKVPKPRPGC CAKHGLAEAY KTSIDFPDET LSFIKSHPLM ENSBTAP00000022349/1-1073 PDSVWTAVPE DKVPKPRPGC CAKHGLAEAY KTSIDFPDET LSFIKSHPLM BACU003227/1-1076 PDSVWTAVPE DKVPKPRPGC CAKHGLAEAY KTSIDFPDET LSFIKSHPLM bmy_17421T0/1-1111 PDSVWTAVPE DKVPKPRPGC CAKHGLAEAY KTSIDFPDET LSFIKSHPLM 501 550 ENSTTRP00000014853/1-1073 DSAVPPIADE PWFTKTRIRY RLTAIAVDHS AGPHQNYTVI FVGSEAGVVL ENSP00000324857/1-1073 DSAVPPIADE PWFTKTRVRY RLTAISVDHS AGPYQNYTVI FVGSEAGMVL ENSBTAP00000022349/1-1073 DSAVPPIADE PWFTKTRIRY RLTAIAVDHS AGPHQNYTVI FVGSEAGVVL BACU003227/1-1076 DSAVPPIADE PWFTKTRIRY RLTAVAVDHS AGPHQNYTVI FVGSEAGMVL bmy_17421T0/1-1111 DSAVPPIADE PWFTKTRIRY RLTAIAVDHS AGPHQNYTVI FVGSEAGMVL 551 600 ENSTTRP00000014853/1-1073 KVLAKTSPFS LNDSVLLEEI EAYNHAXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324857/1-1073 KVLAKTSPFS LNDSVLLEEI EAYNHAKCSA ENEEDKKVIS LQLDKDHHAL ENSBTAP00000022349/1-1073 KVLAKTSPFS LNDSVLLEEI EAYNHAKCSA ENEEDRKVIS LQLDKDHHAL BACU003227/1-1076 KVLAKTSPFS LNDSVLLEEI EAYNHAKCNA ENEEDRKVIS LQLDKDHHAL bmy_17421T0/1-1111 KVLAKTSPFS LNDSVLLEEI EAYNHAKCNA ENEEDRKVIS LQLDKDHHAL 601 650 ENSTTRP00000014853/1-1073 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324857/1-1073 YVAFSSCIIR IPLSRCERYG SCKKSCIASR DPYCGWLSQG SCGRVTPGML ENSBTAP00000022349/1-1073 YVAFSSCVIR IPLSRCERYG SCKKSCIASR DPYCGWLSQG ACGRVSPAML BACU003227/1-1076 YVAFSSCVIR IPLSRCERYG SCKKSCIASR DPYCGWLSPG ACGQVTPGML bmy_17421T0/1-1111 YVAFSSCVIR IPLSRCERYG SCKKSCIASR DPYCGWLSPG ACGQVTPGML 651 700 ENSTTRP00000014853/1-1073 XXXXXXXXXX GNTAHLGDCH EILPTSTTPD YKIFGGPTSD MEVSSSSVTT ENSP00000324857/1-1073 AEGYEQDTEF GNTAHLGDCH EILPTSTTPD YKIFGGPTSD MEVSSSSVTT ENSBTAP00000022349/1-1073 AGGFEQDTEY GNTAHLGDCH EILPTSTTPD YKIFGGPTSD MEVSSSSVTT BACU003227/1-1076 AGGFEQDTEY GNTAHLGDCH EILPTSTTPD YKIFGGPTS- ---------- bmy_17421T0/1-1111 AGGFEQDTEY GNTAHLGDCH EILPTSTTPD YKIFGGPTSD MEVSSSSVTT 701 750 ENSTTRP00000014853/1-1073 MASIPEITPK VIDTWRPKLT SSRKFVVQDD PNTSDFTDPL SGIPKXXXXX ENSP00000324857/1-1073 MASIPEITPK VIDTWRPKLT SSRKFVVQDD PNTSDFTDPL SGIPKGVRWE ENSBTAP00000022349/1-1073 MASIPEITPK VIDTWRPKLT SSRKFVVQDD PNTSDFTDPL SGIPKGVRWE BACU003227/1-1076 ---------- ---------- ---------- ---------- -----GVRWE bmy_17421T0/1-1111 MASIPEITPK VIDTWRPKLT SSRKFVVQDD PNTSDFTDPL S----GVRWE 751 800 ENSTTRP00000014853/1-1073 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324857/1-1073 VQSGESNQMV HMNVLITCVF AAFVLGAFIA GVAVYCYRDM FVRKNRKIHK ENSBTAP00000022349/1-1073 VQSGEANQMV HMNVLITCVF AAFVLGAFIA GVAVYCYRDM FVRKNRKIHK BACU003227/1-1076 VQSGESNQMV HMNVLITCVF AAFVLGAFIA GVAVYCYRDM FVRKNRKIHK bmy_17421T0/1-1111 VQSGESNQMV HMNVLITCVF AAFVLGAFIA GVAVYCYRDM FVRKNRKIHK 801 850 ENSTTRP00000014853/1-1073 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324857/1-1073 DAESAQSCTD SSGSFAKLNG LFDSPVKEYQ QNIDSPKLYS NLLTSRKELP ENSBTAP00000022349/1-1073 DAESAQSCTD SSGSFAKLNG LFDSPVKEYQ QNIDSPKLYS NLLTSRKELP BACU003227/1-1076 DAESAQSCTD SSGSFAKLNG LFDSPVKEYQ QNIDSPKLYS NLLTSRKELP bmy_17421T0/1-1111 DAESAQSCTD SSGSFAKLNG LFDSPVKEYQ QNIDSPKLYS NLLTSRKELP 851 900 ENSTTRP00000014853/1-1073 XXXXXXXXXX XQRGQPPELA ALPTPESTPV LHQKTLQAMK SHSDKAHGHG ENSP00000324857/1-1073 PNGDTKSMVM DHRGQPPELA ALPTPESTPV LHQKTLQAMK SHSEKAHGHG ENSBTAP00000022349/1-1073 PNGDTKSMVM DHRGQPPELA ALPTPESTPV LHQKTLQAMK SHSEKAHGHG BACU003227/1-1076 PNGDTKSMVM DHRGQPPELA ALPTPESTPV LHQKTLQAMK SHSDKAHGHG bmy_17421T0/1-1111 PNGDTKSMVM DHRGQPPELA ALPTPESTPV LHQKTLQAMK SHSDKAHGHG 901 950 ENSTTRP00000014853/1-1073 ASRKETPQFF PSSPPPHSPL SHGHIPSAIV LPNATHDYNT SFSNSNAHKA ENSP00000324857/1-1073 ASRKETPQFF PSSPPPHSPL SHGHIPSAIV LPNATHDYNT SFSNSNAHKA ENSBTAP00000022349/1-1073 ASRKETPQFF PSSPPPHSPL SHGHIPSAIV LPNATHDYNT SFSNSNAHKA BACU003227/1-1076 ASRKETPQFF PSSPPPHSPL SHGHIPSAIV LPNATHDYNT SFSNSNAHKA bmy_17421T0/1-1111 ASRKETPQFF PSSPPPHSPL SHGHIPSAIV LPNATHDYNT SFSNSNAHKA 951 1000 ENSTTRP00000014853/1-1073 EKKLQNIDHP LAKSSSKRDH RRSVDSRNTL NDLLKHLNDP NSNPKAIMGD ENSP00000324857/1-1073 EKKLQNIDHP LTKSSSKRDH RRSVDSRNTL NDLLKHLNDP NSNPKAIMGD ENSBTAP00000022349/1-1073 EKKLQNIDHP LTKSSSKRDH RRSVDSRNTL NDLLKHLNDP NSNPKAIMGD BACU003227/1-1076 EKKLQNIDHP LTKSSSKRDH RRSVDSRNTL NDLLKHLNDP SSNPKAIMGD bmy_17421T0/1-1111 EKKLQNIDHP LTKSSSKRDH RRSVDSRNTL NDLLKHLNDP NSNPKAIMGD 1001 1050 ENSTTRP00000014853/1-1073 IQMAHQTLML DPVGPMSEVP PKVPNREASL YSPPSTLPRN SPTKRVDVPT ENSP00000324857/1-1073 IQMAHQNLML DPMGSMSEVP PKVPNREASL YSPPSTLPRN SPTKRVDVPT ENSBTAP00000022349/1-1073 IQMAHQTLML DPVGPMSEVP PKVPNREASL YSPPSTLPRN SPTKRVDVPT BACU003227/1-1076 IQMAHQTLML DPVGPMSEVP PKVPNREASL YSPPSTLPRN SPTKRVDVPT bmy_17421T0/1-1111 IQMAHQTLML DPVGPMSEVP PKVPNREASL YSPPSTLPRN SPTKRVDVPT 1051 1100 ENSTTRP00000014853/1-1073 TPGVPMTSLE RQRGYHKNSS QRHSISAMPK NLSSPNGVLL SRQPSMNRGG ENSP00000324857/1-1073 TPGVPMTSLE RQRGYHKNSS QRHSISAMPK NLNSPNGVLL SRQPSMNRGG ENSBTAP00000022349/1-1073 TPGVPMTSLE RQRGYHKNSS QRHSISAMPK NLSSPNGVLL SRQPSMNRGG BACU003227/1-1076 TPGVPMTSLE RQRGYHKNSS QRHSISAMPK NLSSPNGVLL SRQPSMNRGG bmy_17421T0/1-1111 TPGVPMTSLE RQRGYHKNSS QRHSISAMPK NLSSPNGVLL SRQPSMNRGG 1101 1150 ENSTTRP00000014853/1-1073 YMPTPAGAKV DYIQGTPVSV HLQPSLSRQS SYTSNGTLPR TGLKRTPSLK ENSP00000324857/1-1073 YMPTPTGAKV DYIQGTPVSV HLQPSLSRQS SYTSNGTLPR TGLKRTPSLK ENSBTAP00000022349/1-1073 YVPTPAGPKV DYIQGAPVSA HLQPSLSRQS SYTSNGTLPR TGLKRTPSLK BACU003227/1-1076 YMPAPAGAKV DYIQGTPVSV HLQPSLSRQS SYTSNGTLPR TGLKRTPSLK bmy_17421T0/1-1111 YMPAPAGAKV DYIQGTPVSV HLQPSLSRQS SYTSNGTLPR TGLKRTPSLK 1151 1200 ENSTTRP00000014853/1-1073 PDVPPKPSFV PQTTSVRPLN KYTY ENSP00000324857/1-1073 PDVPPKPSFV PQTPSVRPLN KYTY ENSBTAP00000022349/1-1073 PDVPPKPSFV PQTTSVRPLN KYTY BACU003227/1-1076 PDVPPKPSFV PQTTSVRPLN KYTY bmy_17421T0/1-1111 PDVPPKPSFV PQTTSVRPLN KYTY