KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:18 2014 Check: 00 .. Name: ENSTTRP00000013615/1-818 Len: 856 Check: 6922 Weight: 1.00 Name: ENSP00000362931/1-655 Len: 856 Check: 9936 Weight: 1.00 Name: ENSBTAP00000022396/1-639 Len: 856 Check: 3036 Weight: 1.00 Name: bmy_19631T0/1-628 Len: 856 Check: 8380 Weight: 1.00 Name: BACU018047/1-670 Len: 856 Check: 7870 Weight: 1.00 // 1 50 ENSTTRP00000013615/1-818 MERKGERWSG LRHEGQRPPG QGPGQRQELS LSAAVRSPGV RRPSTEVAPP ENSP00000362931/1-655 MERK------ ---------- ---------- ---------- ---------- ENSBTAP00000022396/1-639 MNMF------ ---------- ---------- ---------- ---------- bmy_19631T0/1-628 ---------- ---------- ---------- ---------- ---------- BACU018047/1-670 MNMF------ ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013615/1-818 LTPRLWAAGP RPGAPASFRA GSHRLSCPAR PARPLGPLQG PALGRRGRPR ENSP00000362931/1-655 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022396/1-639 ---------- ---------- ---------- ---------- ---------- bmy_19631T0/1-628 ---------- ---------- ---------- ---------- ---------- BACU018047/1-670 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013615/1-818 RASPLTRPEP LPACPAWALL CAPWAARPLP PGRRPEPPLR QAPHPGLAPL ENSP00000362931/1-655 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022396/1-639 ---------- ---------- ---------- ---------- ---------- bmy_19631T0/1-628 ---------- ---------- ---------- ---------- ---------- BACU018047/1-670 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000013615/1-818 LGLHPHLGLP FSSPFALHPS HYHAVLALQA RKKRTKAKKD KAQKKSETQH ENSP00000362931/1-655 ---------- ---------- ----VLALQA RKKRTKAKKD KAQRKSETQH ENSBTAP00000022396/1-639 ---------- ---------- ----VLFL-- ---------- ----RSETQP bmy_19631T0/1-628 ---------- ---------- ---------- ---------- -----SETQH BACU018047/1-670 ---------- ---------- ----VLFL-- ---------- ----RSETQH 201 250 ENSTTRP00000013615/1-818 RGSAPHSESD LPEQEEEILG SDDDEQEDPN DYCKGGYHLV KIGDLFNGRY ENSP00000362931/1-655 RGSAPHSESD LPEQEEEILG SDDDEQEDPN DYCKGGYHLV KIGDLFNGRY ENSBTAP00000022396/1-639 RGSAPHSESD PPEQEEEILG SDDDEQEDPN DYCKGGYHLV KIGDLFNGRY bmy_19631T0/1-628 RGSAPHSESD LPEQEEEILG SDDDEQEDPN DYCKGGYHLV KIGDLFNGRY BACU018047/1-670 RGSAPHSESD LPEQEEEILG SDDDEQEDPN DYCKGGYHLV KIGDLFNGRY 251 300 ENSTTRP00000013615/1-818 HVIRKLGWGH FSTVWLSWDI QGKKFVAMKV VKSAEHYTET ALDEIRLLKS ENSP00000362931/1-655 HVIRKLGWGH FSTVWLSWDI QGKKFVAMKV VKSAEHYTET ALDEIRLLKS ENSBTAP00000022396/1-639 HVIRKLGWGH FSTVWLSWDI QGKKFVAMKV VKSAEHYTET ALDEIRLLKS bmy_19631T0/1-628 HVIRKLGWGH FSTVWLSWDI QGKKFVAMKV VKSAEHYTET ALDEIRLLKS BACU018047/1-670 HVIRKLGWGH FSTVWLSWDI QGKKFVAMKV VKSAEHYTET ALDEIRLLKS 301 350 ENSTTRP00000013615/1-818 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ICMVFEVLGH HLLKWIIKSN ENSP00000362931/1-655 VRNSDPNDPN REMVVQLLDD FKISGVNGTH ICMVFEVLGH HLLKWIIKSN ENSBTAP00000022396/1-639 VRNSDPNDPN REMVVQLLDD FKISGVNGTH ICMVFEVLGH HLLKWIIKSN bmy_19631T0/1-628 VRNSDPNDPN REMVVQLLDD FKISGVNGTH ICMVFEVLGH HLLKWIIKSN BACU018047/1-670 VRNSDPNDPN REMVVQLLDD FKISGVNGTH ICMVFEVLGH HLLKWIIKSN 351 400 ENSTTRP00000013615/1-818 YQGLPLPCV- KIIQQVLQGL DYLHTKCRII HTDIKPENIL LSVNEQYIRR ENSP00000362931/1-655 YQGLPLPCVK KIIQQVLQGL DYLHTKCRII HTDIKPENIL LSVNEQYIRR ENSBTAP00000022396/1-639 YQGLPLPCVK KIIQQVLQGL DYLHTKCRII HTDIKPENIL LSVNEQYIRR bmy_19631T0/1-628 YQGLPLPCVK KIIQQVLQGL DYLHTKCRII HTDIKPENIL LSVNEQYIRR BACU018047/1-670 YQGLPLPCVK KIIQQVLQGL DYLHTKCRII HTDIKPENIL LSVNEQYIRK 401 450 ENSTTRP00000013615/1-818 LAAEATEWQR SGAPPPSGSA VSTAPQPKPA DKMSKNKKKK LKKKQKRQAE ENSP00000362931/1-655 LAAEATEWQR SGAPPPSGSA VSTAPQPKPA DKMSKNKKKK LKKKQKRQAE ENSBTAP00000022396/1-639 LAAEATEWQR SGAPPPSGSA VSTAPQPKPA DKMSKNKKKK LKKKQKRQAE bmy_19631T0/1-628 LAAEATEWQR SGAPPPSGSA VSTAPQPKPA DKMSKNKKKK LKKKQKRQAE BACU018047/1-670 LAAEATEWQR SGAPPPSGSA VSTAPQPKPA DKMSKNKKKK LKKKQKRQAE 451 500 ENSTTRP00000013615/1-818 LLEKRMQEIE EMEKESGPGQ KRPNKQEESE SPVERPLKEN PPNKMTQEKL ENSP00000362931/1-655 LLEKRMQEIE EMEKESGPGQ KRPNKQEESE SPVERPLKEN PPNKMTQEKL ENSBTAP00000022396/1-639 LLEKRMQEIE EMEKESGPGQ KRPNQQEESE RPVERPLKEN PPNKMTQEKL bmy_19631T0/1-628 LLEKRMQEIE EMEKESGPGQ KRPNKQEESE SPVERPLKEN PPNKMTQEKL BACU018047/1-670 LLEKRMQEIE EMEKESGPGQ KRPNKQEESE SPVERPLKEN PPNKMTQEKL 501 550 ENSTTRP00000013615/1-818 EESSTIHQDQ TLTEHGVEGG AAEINCNGVI EVVNYTENNN KETLRLKEDL ENSP00000362931/1-655 EESSTIGQDQ TLMERDTEGG AAEINCNGVI EVINYTQNSN NETLRHKEDL ENSBTAP00000022396/1-639 EESSTIHQDQ TLTGRGIEGG AAEINCNGVI EIINFTENSN KETLRLKEDL bmy_19631T0/1-628 EESSTIHQDQ TLTEHGIEGG AAEINCNGVI EVVNYTENNN KETLRLKEDL BACU018047/1-670 EESSTIHQDQ TFTEHGVEGG AAEINCNGVI EVVNYTENNN KETLRLKEDL 551 600 ENSTTRP00000013615/1-818 HNANGCDVQN LKQEPSFLSS QNGDSSTSQE TDSCTPVTSE VSDTMMCQSS ENSP00000362931/1-655 HNANDCDVQN LNQESSFLSS QNGDSSTSQE TDSCTPITSE VSDTMVCQSS ENSBTAP00000022396/1-639 RNANDCDIQN LKQEPSLLSS QNGDSSTSQE TDSCTPVTSE VSDTMMCQSS bmy_19631T0/1-628 HNANDCDVQN LKQEPSFLSS QNGDSSTSQE TDSCTPVXSE VSDTMMCQSS BACU018047/1-670 HNANDCDVQN LKQEPSFLSS QNGDSSTSQE TDSCTPVTSE VSDTMMCQSS 601 650 ENSTTRP00000013615/1-818 SNVDRSFSAQ DISQLQESIR AEIPCEDEQE QEHNGPLDNK GKSTAGNFLV ENSP00000362931/1-655 STVGQSFSEQ HISQLQESIR AEIPCEDEQE QEHNGPLDNK GKSTAGNFLV ENSBTAP00000022396/1-639 SNVDQSFSEQ DISQLQESIR AEIPCEDEQE QEHNGPLDNK GKSTAGNFLV bmy_19631T0/1-628 SNVDRSFR-- ---------- ---------- ---------- -KSTAGNFLV BACU018047/1-670 SNVDRSFSEQ DISQLQESIR AEIPCEDEQE QEHNGPLDNK GKSTAGNFLV 651 700 ENSTTRP00000013615/1-818 NPLEPKNAEK LQVKIADLGN ACWVHKHFTE DIQTRQYRSL EVLIGSGYNT ENSP00000362931/1-655 NPLEPKNAEK LKVKIADLGN ACWVHKHFTE DIQTRQYRSL EVLIGSGYNT ENSBTAP00000022396/1-639 NPLEPKNAEK LQVKIADLGN ACWVHKHFTE DIQTRQYRSL EVLIGSGYNT bmy_19631T0/1-628 NPLEPKNAEK LQVKIADLGN ACWVHKHFTE DIQTRQYRSL EVLIGSGYNT BACU018047/1-670 NPLEPKNAEK LQVKIADLGN ACWVHKHFTE DIQTRQYRSL EVLIGSGYNT 701 750 ENSTTRP00000013615/1-818 PADIWSTACM ----LPSDYL FEHR--EEYT RDE------- ---------- ENSP00000362931/1-655 PADIWSTACM AFELATGDYL FEPHSGEEYT RDE------- ---------- ENSBTAP00000022396/1-639 PADIWSTACM AFELATGDYL FEPHSGEEYT RDE------- ---------- bmy_19631T0/1-628 PADIWSTACM AFELATGDYL FEPHSGEEYT RDEDHIAHII ELIGRIPRRF BACU018047/1-670 PADIWSTACM AFELATGDYL FEPHSGEEYT RDEDHIAHII ELIGRIPRRF 751 800 ENSTTRP00000013615/1-818 ---------- ----DHIALI IELLGKVPRK LIVAGKYSKE FFTKKGDLKH ENSP00000362931/1-655 ---------- ----DHIALI IELLGKVPRK LIVAGKYSKE FFTKKGDLKH ENSBTAP00000022396/1-639 ---------- ----DHIALI IELLGKVPRK LIVAGKYSKE FFTKKGDLKH bmy_19631T0/1-628 ALSGKYSQDF FNRRDHIALI IELLGKVPRK LIVAGKYSKE FFTKKGDLKH BACU018047/1-670 ALSGKYSQDF FNRRDHIALI IELLGKVPRK LIVAGKYSKE FFTKKGDLKH 801 850 ENSTTRP00000013615/1-818 ITKLKPWGLF EVLVEKYEWS QEEAAGFTDF LLPMLELIPE KRATAADCLR ENSP00000362931/1-655 ITKLKPWGLF EVLVEKYEWS QEEAAGFTDF LLPMLELIPE KRATAAECLR ENSBTAP00000022396/1-639 ITKLKPWGLF EVLVEKYEWP QEEAAGFTDF LLPMLELIPE KRATAADCLR bmy_19631T0/1-628 ITKLKPWGLF EVLVEKYEWS QEEAAGFTDF LLPMLELIPE KRATAADCLR BACU018047/1-670 ITKLKPWGLF EVLVEKYEWS QEEAAGFTDF LLPMLELIPE KRATAADCLR 851 900 ENSTTRP00000013615/1-818 HPWLNS ENSP00000362931/1-655 HPWLNS ENSBTAP00000022396/1-639 HPWLNS bmy_19631T0/1-628 HPWLNS BACU018047/1-670 HPWLNS