KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:21 2014 Check: 00 .. Name: ENSP00000255136/1-614 Len: 695 Check: 4394 Weight: 1.00 Name: bmy_08776T0/1-632 Len: 695 Check: 9966 Weight: 1.00 Name: ENSBTAP00000022412/1-618 Len: 695 Check: 200 Weight: 1.00 Name: ENSTTRP00000007204/1-585 Len: 695 Check: 5510 Weight: 1.00 Name: BACU015465/1-505 Len: 695 Check: 5231 Weight: 1.00 // 1 50 ENSP00000255136/1-614 -----MNASG SGYPLASLYV GDLHPDVTEA MLYEKFSPAG PILSIRVCRD bmy_08776T0/1-632 LPITLFGAQG KKIPFTS--- ---------- ---------- ---------- ENSBTAP00000022412/1-618 -----MNASG PGYPLASLYV GDLHPDVTEA MLYEKFSPAG PILSIRVCRD ENSTTRP00000007204/1-585 -----MNSSG PGYPLASLYA GDLHPDVTEA MLYEKFSPAG PILSIRVCRD BACU015465/1-505 -----MNSSG PGYPLASLYA GDLHPDVTEA MLYEKFSPAG PILSIRVCRD 51 100 ENSP00000255136/1-614 VATRRSLGYA YINFQQPADA ERALDTMNFE MLKGQPIRIM WSQRDPGLRK bmy_08776T0/1-632 ---------- --SFLSSCPA ERALDTMNFE VIKGQPIRIM WSQRDPGLRK ENSBTAP00000022412/1-618 VATRRSLGYA YINFQQPADA ERALDTMNFE VIKGQPIRIM WSQRDPGLRK ENSTTRP00000007204/1-585 VATRRSLGYA YINFQQPADA ERALDTMNFE VIKGQPIRIM WSQRDPGLRK BACU015465/1-505 VATRRSLGYA YINFQQPADA ERALDTMNFE VIKGQPIRIM WSQRDPGLRK 101 150 ENSP00000255136/1-614 SGVGNIFIKN LEDSIDNKAL YDTFSTFGNI LSCKVACDEH GSRGFGFVHF bmy_08776T0/1-632 SGVGNIFIKN LEDSIDNKAL YDTFSTFGNI LSCKVVCDDH GSRGFGFVHF ENSBTAP00000022412/1-618 SGVGNIFIKN LEDSIDNKAL YDTFSTFGNI LSCKVVCDEH GSRGFGFVHF ENSTTRP00000007204/1-585 SGVGNIFIKN LEDSIDNKAL YDTFSTFGNI LSCKVVCDDH GSRGFGFVHF BACU015465/1-505 SGVGNIFIKN LEDSIDNKAL YDTFSTFGNI LSCKVVCDDH GSRGFGFVHF 151 200 ENSP00000255136/1-614 ETHEAAQQAI NTMNGMLLND RKVFVGHFKS RREREAELGA RALEFTNIYV bmy_08776T0/1-632 ETHEAAQNAI STMNGMLLND RKVFVGHFKP RRERDAELGA RAMEFTNIYV ENSBTAP00000022412/1-618 ETHEAAQNAI STMNGMLLND RKVFVGHFKS RREREVELGA RAMEFTNIYV ENSTTRP00000007204/1-585 ETHEAAQNAI STMNGMLLND RKVFVGHFKP RRERDAELGA RAMEFTNIYV BACU015465/1-505 ETHEAAQNAI STMNGMLLND RKVFVGHFKP RRERDAELGA RAMEFTNIYV 201 250 ENSP00000255136/1-614 KNLPVDVDEQ GLQDLFSQFG KMLSVKVMRD NSGHSRCFGF VNFEKHEEAQ bmy_08776T0/1-632 KNLHVDVNEQ CLQDLFSQFG KILSVKVMRD DSGHSRGFGF VNFETHEEAQ ENSBTAP00000022412/1-618 KNLHVDVDEQ RLQDLFSQFG KMLSVKVMRD DSGHSRGFGF VNFEKHEEAQ ENSTTRP00000007204/1-585 KNLHVDVDEQ CLQDLFSQFG KILSVKVM-- DDSHPR-FGF VNFETHEA-- BACU015465/1-505 KNLHVDVNEQ CLQDLFSQFG KILSVKVMRD DSGHSRGFGF VNFETHEEAQ 251 300 ENSP00000255136/1-614 KAVVHMNGKE VSGRLLYAGR AQKRVERQNE LKRRFEQMKQ DRLRRYQGVN bmy_08776T0/1-632 KAVMDMNGRE VRGRLLYVGR AQKRVERQNE LKRRFEQMKQ DRLTRYQGVN ENSBTAP00000022412/1-618 KAVVNMNGRE VSGRLLYVGR AQKRVERQNE LKRRFEQMKQ DRLTRYQGVN ENSTTRP00000007204/1-585 QAVTDMNGRE VSGRLLYVGR AQKRVERQNE LKRRFEQMKQ DRLTRYQGVN BACU015465/1-505 KAVMDMNGRE VRGRLLYVGR AQKRVERQNE LKRRFEQMKQ DRLTRYQGVN 301 350 ENSP00000255136/1-614 LYVKNLDDSI DDDKLRKEFS PYGVITSAKV MTEGGHSKGF GFVCFSSPEE bmy_08776T0/1-632 LYVKNLDDSI DDEKLRKEFS PYGVITSAKV MTEGGHSKGF GFVCFSSPEE ENSBTAP00000022412/1-618 LYVKNLDDSI DDEKLRKEFS PYGVITSAKV MTEGGHSKGF GFVCFSSPEE ENSTTRP00000007204/1-585 LYVKNLDDSI DDEKLRKEFS PYGVITSAKV MTEGGHSKGF GFVCFSSPEE BACU015465/1-505 LYVKNLDDSI DDEKLRKEFS PYGVITSAKV MTEGGHSKGF GFVCFSSPEE 351 400 ENSP00000255136/1-614 ATKAVTEMNG RIVGTKPLYV ALAQRKEERK AILTNQYMQR LSTMRTLSNP bmy_08776T0/1-632 ATKAVTEMNG RIVGTKPLYV ALAQRKEERR AILTNQYMQR LSTMRALGSP ENSBTAP00000022412/1-618 ATKAVTEMNG RIVGTKPLYV ALAQRKEERK AILTNQYMQR LSTMRALGGP ENSTTRP00000007204/1-585 ATKAVTEMNG RIVGTKPLYV ALAQRKEERK AILTNQYMQR LSTMRALGSP BACU015465/1-505 ATKAVTEMNG RIVGTKPLYV ALAQRKEERK AILTNQYMQR LSTMRALGSP 401 450 ENSP00000255136/1-614 LLGSFQQPSS YFLPAMP--- ---------Q PPAQAAYYGC GPVTPTQPAP bmy_08776T0/1-632 LLGSFQQPAS YFLPAAPQVT SCPHPFPDSQ PPAQAPYYGS GP--PAYPPA ENSBTAP00000022412/1-618 ILGSFQQPAS YFLPAVP--- ---------Q PPAQAPYYGS GP--PIQPAP ENSTTRP00000007204/1-585 LLGSFQQPAS YFLPATP--- ---------Q PPAQAPYYGS GP--PVQPAS BACU015465/1-505 LLGSFQQPAS YFLPAAP--- ---------Q ---------- ---------- 451 500 ENSP00000255136/1-614 RWTSQPPRPS C-----ASMV RPPVVPRRPP AHISSVRQAS TQVPRTVPHT bmy_08776T0/1-632 ---------- ------ASVV QPAAVSRRPS VSIGSARQIS NHVPRLVPHA ENSBTAP00000022412/1-618 RWTAQPPRPS SAYPPGASVV RPAAMSRRPL TPVGSSRQVS THVPHLVPHT ENSTTRP00000007204/1-585 RWTAQLPRPS S-----ASVV QPAAVSRRPS FPIGSARQIS THVPRLVPHA BACU015465/1-505 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000255136/1-614 QRVANIGTQT TGPSGVGCCT PGRPLLPCKC SSAAHSTYRV QEPAVHIPGQ bmy_08776T0/1-632 QGVANIGTQT TGPGVAGCSS PRGPLLTHRC SLATHNTHRV QEPAVRVPGQ ENSBTAP00000022412/1-618 QRVANIGTQT TGPSMTGCST PSRPLLTHTY STPAHRTDRV QEPAVHVPGQ ENSTTRP00000007204/1-585 QGVANIGTQT TGPGMAGCSS PRGPLLTHRC SLATHNTHRV QEPAVRVPGQ BACU015465/1-505 ---------- ---------- ---------- ---------V QEPAVRVPGQ 551 600 ENSP00000255136/1-614 EPLTASMLAA APLHEQKQMI GERLYPLIHD VHTQLAGKIT GMLLEIDNSE bmy_08776T0/1-632 EPLTASMLAA APLHEQKQMI GERLYPLIYN VHTQLAGKIT GMLLEIDNSE ENSBTAP00000022412/1-618 EPLTASMLAA APLHEQKQMI GERLFPLVYN VHAHLAGKIT GMLLEIDNSE ENSTTRP00000007204/1-585 EPLTASMLAA APLHEQKQMI GERLYPLIYN VHTQLAGKIT GMLLEIDNSE BACU015465/1-505 EPLTASMLAA APLHEQKQMI GERLYPLIYN VHAQLAGKIT GMLLEIDNSE 601 650 ENSP00000255136/1-614 LLLMLESPES LHAKIDEAVA ---------- ---------- ---VLQAHQA bmy_08776T0/1-632 LLLLLESPES LNAKVGWSLR GAGRPGGRGG LPIKASPRRA GRLLLRQVKC ENSBTAP00000022412/1-618 LLLMLESPES LNAKVEEALA ---------- ---------- ---VLQAHQA ENSTTRP00000007204/1-585 LLLLLESPES LSAK------ ---------- ---------- ---------- BACU015465/1-505 LLLLLESPES LNAKVEEALA ---------- ---------- ---VLQDHEA 651 700 ENSP00000255136/1-614 MEQPKAYMH- ---------- ---------- ---------- ----- bmy_08776T0/1-632 IFLLKSANTC RMWRWQRALV KGRLLQPLRP PCSSAGKTVR QGAVF ENSBTAP00000022412/1-618 TEHMQGVNLC ---------- ---------- ---------- ----- ENSTTRP00000007204/1-585 ---------- ---------- ---------- ---------- ----- BACU015465/1-505 TEQT------ ---------- ---------- ---------- -----