KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:22 2014 Check: 00 .. Name: ENSP00000296215/1-396 Len: 591 Check: 6634 Weight: 1.00 Name: ENSBTAP00000022416/1-399 Len: 591 Check: 9629 Weight: 1.00 Name: ENSTTRP00000008150/1-394 Len: 591 Check: 9394 Weight: 1.00 Name: bmy_02126T0/1-374 Len: 591 Check: 3245 Weight: 1.00 Name: BACU009684/1-585 Len: 591 Check: 7524 Weight: 1.00 // 1 50 ENSP00000296215/1-396 MKAVKSERER GSRRRHRDGD VV-LPAGVVV KQERLSPEVA PPAHRRPDHS ENSBTAP00000022416/1-399 MKEVKSERER GSRRRHRDGD MVGIAPAVVV KQERLSPESA PPVHRRPDSS ENSTTRP00000008150/1-394 MKEVKSERDR GSRRRHRDGD MV---AAVVV KQERLSPESA PPVHRRPDSS bmy_02126T0/1-374 MKEVKSERDR GSRRRHRDGD MV--AAAVVV KQERLSPESV PPVHRRPDSS BACU009684/1-585 MKEVKSERDR GSRRRHRDGD MV--AAAVVV KQERLSPESV PPVHRRPDSS 51 100 ENSP00000296215/1-396 GGSPSPPTSE PARSGHRGNR ARGVSRSPPK KKNKASGRRS KSPRSKRNRS ENSBTAP00000022416/1-399 GGSPSPPAGE SGRPSHRGNR ARGGSRSPAK KKNKSSGRRS KSPRSKRSRS ENSTTRP00000008150/1-394 GGSPSPPAGE SGRPSHRGNR ARGGSRSPAR KKNKSSGRRS KSPRSKRSRS bmy_02126T0/1-374 GGSPSPPAGE SGRPSHRGNR ARGGSRSPAK KKNKSSGRRS KSPRSKRSRS BACU009684/1-585 GGSPSPPAGE SGRPSHRGNR ARGGSRSPAK KKNKSSGRRS KSPRSKRSRS 101 150 ENSP00000296215/1-396 PHHSTVKVKQ EREDHPRRGR EDRQHREPSE QEHRRARNSD RDRHRGHSHQ ENSBTAP00000022416/1-399 PHHSAIKVKQ EREDHPRRGR EDRPHREPSG QEHKRARNSD RDRHRGHSHQ ENSTTRP00000008150/1-394 PHHSTVKVKQ EREDHPRRGR EDRPHREPSG QEHRRARNSN RDRHRGHSHQ bmy_02126T0/1-374 PHHSTVKVK- ---------- ---------- QEHRRARNSD RDRHRGHSHQ BACU009684/1-585 PHHSTVKVKQ EREDHPRRGR EDRPHREPSG QEHRRARNSD RDRHRGHSHQ 151 200 ENSP00000296215/1-396 RRTSNERPGS GQGQGRDRDT QNLQAQEEER EFYNARRREH RQRNDVGGGG ENSBTAP00000022416/1-399 RRSSGERPGS GQPQGRDRDA QNLQAQEAER EFHNTRRREH RQKNEVSAGS ENSTTRP00000008150/1-394 RRSSDERPGS GQPQGRDRDA QNLQAQEAER EFHNTRRREH RQKNE--AGG bmy_02126T0/1-374 RRSSVERPGS GQPQGRDRDA QNLQAQESER EFHNARRREH RQKNE--AGG BACU009684/1-585 RRSSVERPGS GQPQGRDRDA QNLQAQESER EFHNARRREH RQKNE--AGG 201 250 ENSP00000296215/1-396 SESQELVPR- -PGGNNKEKE VPAKEKPSFE LSGALLEDTN TFRGVVIKYS ENSBTAP00000022416/1-399 NASQDALPRP GPGGNNKDRE VPVKEKPSFE LSGALLEDTN TFRGVVIKYS ENSTTRP00000008150/1-394 NTSQDSLPQP GPGSNNKDKD VPVKEKPSFE LSGALLEDTN TFRGVVIKYS bmy_02126T0/1-374 NASQDSLPQP GPGSNNKDKE VPVKEKPSFE LSGALLEDTN TFRGVVIKYS BACU009684/1-585 NASQDSLPQP GPGSNNKDKE VPVKEKPSFE LSGALLEDTN TFRGVVIKYS 251 300 ENSP00000296215/1-396 EPPEARIPKK RWRLYPFKND EVLPVMYIHR QSAYLLGRHR RIADIPIDHP ENSBTAP00000022416/1-399 EPPEARIPKK RWRLYPFKND EVLPVMYIHR QSAYLLGRHR RIADIPIDHP ENSTTRP00000008150/1-394 EPPEARIPKK RWRLYPFKND EVLPVMYIHR QSAYLLGRHR RIADIPIDHP bmy_02126T0/1-374 EPPEARIPKK RWRLYPFKND EVLPVMYIHR QSAYLLGRHR RIADIPIDHP BACU009684/1-585 EPPEARIPKK RWRLYPFKND EVLPVMYIHR QSAYLLGRHR RIADIPIDHP 301 350 ENSP00000296215/1-396 SCSKQHAVFQ YRLVEYTRAD GTVGRRVKPY IIDLGSGNGT FLNNKRIEPQ ENSBTAP00000022416/1-399 SCSKQHAVFQ YRLVEYTRAD GTVGRRVKPY IIDLGSGNGT FLNNKRIEPQ ENSTTRP00000008150/1-394 SCSKQHAVFQ YRLVEYTRAD GTVGRRVKPY IIDLGSGNGT FLNNKRIEPQ bmy_02126T0/1-374 SCSKQHAVFQ YRLVEYTRAD GTVGRRVKPY IIDLGSGNGT FLNNKRIEPQ BACU009684/1-585 SCSKQHAVFQ YRLVEYTRAD GTVGRRVKPY IIDLGSGNGT FLNNKRIEPQ 351 400 ENSP00000296215/1-396 RYYELKEKDV LKFGFSSREY VLLHESSDTS EIDRKDDEDE EEEEE----- ENSBTAP00000022416/1-399 RYYELKEKDV LKFGFSSREY VLLHESSDTS EVDRKEDEDD EEEEE----- ENSTTRP00000008150/1-394 RYYELKEKDV LKFGFSSREY VLLHESSDTS EVDRKEDEDD EEEEE----- bmy_02126T0/1-374 RYYELKEKDV LKFGFSSREY VLLHESSDTS EVDRKEDEDD EEEEE----- BACU009684/1-585 RYYELKEKDV LKFG--SREY VLLHESSDTS EVDRKEDEDD EEEEEWSFVE 401 450 ENSP00000296215/1-396 ---------- --VSDS---- ---------- ---------- ---------- ENSBTAP00000022416/1-399 ---------- --VSDS---- ---------- ---------- ---------- ENSTTRP00000008150/1-394 ---------- --VSDS---- ---------- ---------- ---------- bmy_02126T0/1-374 ---------- --VSDS---- ---------- ---------- ---------- BACU009684/1-585 SFEEGRDSWF MRLPDSQDVQ ENPSWLCIVE LEFETLANLE RQIYAFEGSY 451 500 ENSP00000296215/1-396 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022416/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008150/1-394 ---------- ---------- ---------- ---------- ---------- bmy_02126T0/1-374 ---------- ---------- ---------- ---------- ---------- BACU009684/1-585 LEDTQMYGNI IRGWDRYLTN QKNSNSKNDR RNRKFKEAER LFSKSSVTSA 501 550 ENSP00000296215/1-396 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022416/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008150/1-394 ---------- ---------- ---------- ---------- ---------- bmy_02126T0/1-374 ---------- ---------- ---------- ---------- ---------- BACU009684/1-585 AAVSALAGVQ DQLIEKREPG SGTESDTSPD FHNQENEPSQ EDPEDLDGSV 551 600 ENSP00000296215/1-396 ---------- ---------- ---------- ---------- - ENSBTAP00000022416/1-399 ---------- ---------- ---------- ---------- - ENSTTRP00000008150/1-394 ---------- ---------- ---------- ---------- - bmy_02126T0/1-374 ---------- ---------- ---------- ---------- - BACU009684/1-585 QGVKPQKAAS STSSGSHHSS HKKRKNKNRH RASVTIAVKG L