KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:17:23 2014 Check: 00 .. Name: ENSTTRP00000010967/1-618 Len: 757 Check: 8480 Weight: 1.00 Name: ENSP00000260210/1-619 Len: 757 Check: 3409 Weight: 1.00 Name: bmy_18242T0/1-722 Len: 757 Check: 4492 Weight: 1.00 Name: ENSBTAP00000022419/1-651 Len: 757 Check: 1432 Weight: 1.00 // 1 50 ENSTTRP00000010967/1-618 ---------- ---------- ---------- ---------- ---------- ENSP00000260210/1-619 ---------- ---------- ---------- ---------- ---------- bmy_18242T0/1-722 MDKDKKHDCP VRGNVEWAPK VRVSLVSPQK LTRDTLAVPN TLRHFRSWPR ENSBTAP00000022419/1-651 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010967/1-618 ---------- ---------- -------MAA APPLSKAEYL KRYLSGADAG ENSP00000260210/1-619 ---------- ---------- -------MAA APPLSKAEYL KRYLSGADAG bmy_18242T0/1-722 LPEFSLSVSR LRILSSASIR LPAFAAAMAA APPLSKAEYL KRYLSGADAG ENSBTAP00000022419/1-651 ---------- ---------- -------MAA APPLSKAEYL KRYLSGADGG 101 150 ENSTTRP00000010967/1-618 VDGGSESGRK RRKKRPKTGG AGGKGMRIVD DDVSWTSMST TKTEKEEEED ENSP00000260210/1-619 VDRGSESGRK RRKKRPKPGG AGGKGMRIVD DDVSWTAIST TKLEKEEEED bmy_18242T0/1-722 VDGGPESGRK RRKKRPKTGG AGGKGMRIVD DDVSWTSMST TKTEKEEEED ENSBTAP00000022419/1-651 VDGGPESGRK RRKKRPKPSG AGGKGMRIVD DDVSWTSIST TKAEKEEEED 151 200 ENSTTRP00000010967/1-618 DGDLPVVA-- ---------- -EFVDERPEE VKQMEAFRSS AKWKLLGGHS ENSP00000260210/1-619 DGDLPVVA-- ---------- -EFVDERPEE VKQMEAFRSS AKWKLLGGHN bmy_18242T0/1-722 DGDLPVVCHN EDLPSHRHSR HDTPDSSPPR RVHHDTLDSF SPRRVRHDTL ENSBTAP00000022419/1-651 DGDLPVVA-- ---------- -EFVDERPEE VKQMEAFRSS AKWKLLGSHS 201 250 ENSTTRP00000010967/1-618 EDLPSHRHSR HDTPDSSP-R RVRHDPLDSS ---------- ----PRRVRH ENSP00000260210/1-619 EDLPSNRHFR HDTPDSSP-R RVRHGTPDPS -PRKDRHDTP DPS-PRRARH bmy_18242T0/1-722 DSSPP-RRVC YDTPDSSPSR RVRHDPLDSP PPRTVCHDTP DSLHPRRVRH ENSBTAP00000022419/1-651 EDTPSHRQFC HDTPDSSPPR KVRHDTPDPS SPRRVRHDTP DPSPPRRVRH 251 300 ENSTTRP00000010967/1-618 DTPD-SSPRR VRHDTPDSSP PRRVCHDSPD PSPPRRAHHD S-DPSPPRRA ENSP00000260210/1-619 DTPDPSPLRG ARHDS-DTSP PRRIRHDSSD TSPPRRARHD SPDPSPPRRP bmy_18242T0/1-722 DTPD-SSPRR VRHDTPDSSP PRRVCHDSPD PSPPRRAHHD S-DPSPPRRA ENSBTAP00000022419/1-651 DTPDPSPPRK VRHDTPDSSP PRKARHDTPD SSPPRKIRHD TLDSAPPRKV 301 350 ENSTTRP00000010967/1-618 RHDSPDPFPI RKPYHHSSGV SPRRARHDTP DPSPPRRAHH NSSDNSPRRR ENSP00000260210/1-619 QHNS------ -------SGA SPRRVRHDSP DPSPPRRARH GSSDISSPRR bmy_18242T0/1-722 RHDSPDPSPV RKPHRHSSGV SPRRARHDTP DPSPPRRAHH NSSDISPRRR ENSBTAP00000022419/1-651 RHDTPDPSP- ---------- -PRRTRHDTP DSSPPRRTYH SSSDLSPARR 351 400 ENSTTRP00000010967/1-618 AHNSSPDTAQ PRRTLDSVDT PQLRRARHNS PDLASNVPHS LPRTKSSKAP ENSP00000260210/1-619 VHNNSPDTS- -RRTLGSSDT QQLRRARHDS PDLAPNVTYS LPRTKSGKAP bmy_18242T0/1-722 AHNSSPDTAQ PRRTLDSVDT PQLRRAHHNS PDLASNVPHS LPRTKSSKAP ENSBTAP00000022419/1-651 ARNCSPDTAQ PRRTLDSVDR SQLRKAHHNS SDLAANVPHS LPRTKSSEAP 401 450 ENSTTRP00000010967/1-618 E-SSSKTSPH RKGPGPSHLS LPKNSKYEYD SELSPPRKKQ AKSRL-EKQH ENSP00000260210/1-619 ERASSKTSPH WKESGASHLS FPKNSKYEYD PDISPPRKKQ AKSHFGDKKQ bmy_18242T0/1-722 E-SSSKTSPH RKGPGPSHLS FPKNSKYEYD AELSPPRKKQ AKSRFGSKQH ENSBTAP00000022419/1-651 E-SSSKTSPH CKGPGPSHPS LPKNSKYEYD SDLSPSRKKQ ATSHVGNKQH 451 500 ENSTTRP00000010967/1-618 -DSKX----- ---------- ---------- ----XXXXXX XXXXXXXXXX ENSP00000260210/1-619 LDSKG----- ---------- ---------- ----DCQKAT DSDLSSPRHK bmy_18242T0/1-722 -DSKGSSPSH RKYHKSSSPR RHQSHTLDSS SYPSDSRKAS DSDLSPPRHK ENSBTAP00000022419/1-651 -DSKGSSPTH RKHHTGSPPR KH--HTLDSS SYPGDSRKTS DSDLSPPRHK 501 550 ENSTTRP00000010967/1-618 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000260210/1-619 QSPGHQDSDS DLSPPRNRPR HRSSDSDLSP PRRRQRTKSS DSDLSPPRRS bmy_18242T0/1-722 QSSGPRDSDS DLSPPRNRPR HGNSDSDLSP PRRKQRAKSS DSDLSPPRRS ENSBTAP00000022419/1-651 QSSGPQDSDS DLSPPRNRPR HRSSDSDLSP PRRKQRAKSS DSDLSPPRRS 551 600 ENSTTRP00000010967/1-618 XXXXXXAAHM YSGAKTGLVL TDIQRELQEL ERRDQETMAL EAEFQYAETV ENSP00000260210/1-619 QPPGKKAAHM YSGAKTGLVL TDIQREQQEL KEQDQETMAF EAEFQYAETV bmy_18242T0/1-722 QPLGKKAAHM YSGAKTGLVL TDIQREQQEL ERRDQETVAF EAEFQYAETV ENSBTAP00000022419/1-651 QPLGKKAAHM YSGAKTGLVL TDIQREQQEL KKRDQETMAF EAEFQHAETV 601 650 ENSTTRP00000010967/1-618 FRDKSGRKRN LKLERLEQRR KAQKDSERDE LYAQWGKGLA QSRQQQQNVE ENSP00000260210/1-619 FRDKSGRKRN LKLERLEQRR KAEKDSERDE LYAQWGKGLA QSRQQQQNVE bmy_18242T0/1-722 FRDKSGRKRN LKLERLEQRR KAEKDSERDE LYAQWGKGLA QRRQQQQNVE ENSBTAP00000022419/1-651 FRDKSGRKRN LKLERLEQRR KAEKDSKREE LYAQWGKGLA QTRQQQQNVE 651 700 ENSTTRP00000010967/1-618 DAMKEMQKPL ARYIDDEDLD RMLREKEREG DPMAKLIKKN KAKEDKNKKV ENSP00000260210/1-619 DAMKEMQKPL ARYIDDEDLD RMLREQEREG DPMANFIKKN KAKENKNKKV bmy_18242T0/1-722 DAMKEMQKPL ARYIDDEDLD RMLREKEREG DPMANFIKKS KAKESKNKKV ENSBTAP00000022419/1-651 DAMKEMQKPL ARYIDDEDLD RMLREQEREG DPMANFIKKN KAKENKNKKV 701 750 ENSTTRP00000010967/1-618 RPRYSGPAPP PNRFNIWPGY RWDGVDRSNG FEQKRFARLA SKKAVEELAY ENSP00000260210/1-619 RPRYSGPAPP PNRFNIWPGY RWDGVDRSNG FEQKRFARLA SKKAVEELAY bmy_18242T0/1-722 RPRYSGPAPP PNRFNIWPGY RWDGVDR--- ---------- ---------- ENSBTAP00000022419/1-651 RPRYSGPAPP PNRFNIWPGY RWDGVDRSNG FEQKRFARLA SKKAVEELAY 751 800 ENSTTRP00000010967/1-618 KWSVEDM ENSP00000260210/1-619 KWSVEDM bmy_18242T0/1-722 ------- ENSBTAP00000022419/1-651 KWSVEDM