KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:26 2014 Check: 00 .. Name: ENSTTRP00000007738/1-327 Len: 390 Check: 4578 Weight: 1.00 Name: ENSP00000362480/1-327 Len: 390 Check: 4513 Weight: 1.00 Name: ENSBTAP00000022455/1-327 Len: 390 Check: 4734 Weight: 1.00 Name: bmy_20511T0/1-294 Len: 390 Check: 223 Weight: 1.00 Name: BACU000736/1-299 Len: 390 Check: 1007 Weight: 1.00 // 1 50 ENSTTRP00000007738/1-327 --------MS FLGGFFGPI- ---------- ---------- ---------- ENSP00000362480/1-327 --------MS FLGGFFGPI- ---------- ---------- ---------- ENSBTAP00000022455/1-327 --------MS FLGGFFGPI- ---------- ---------- ---------- bmy_20511T0/1-294 MRQPXXAPLV LRRRFFGTMK RGAIYLRVTA PGPDSRQKLP SSQSIDPSLG BACU000736/1-299 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007738/1-327 ---------- ---------- ----CEIDVV LNDGETRKMA EMKTEDGKVE ENSP00000362480/1-327 ---------- ---------- ----CEIDIV LNDGETRKMA EMKTEDGKVE ENSBTAP00000022455/1-327 ---------- ---------- ----CEIDVV LNDGETRKMA EMKTEDGKVE bmy_20511T0/1-294 RNRCGYLEMK NGREQRYSAL AHSSVRIDVV LNDGETRKMV EMKTEVGKVE BACU000736/1-299 ---------- ---------- ---------- ---------- -MKTEVGKVE 101 150 ENSTTRP00000007738/1-327 KHYLFYDGES VSGKVNIAFK QSGKRLEHQG IRIEFVGQIE LFNDKSNTHE ENSP00000362480/1-327 KHYLFYDGES VSGKVNLAFK QPGKRLEHQG IRIEFVGQIE LFNDKSNTHE ENSBTAP00000022455/1-327 KHYLFYDGES VSGKVNLAFK QPGKRLEHQG IRIEFVGQIE LFNDKSNTHE bmy_20511T0/1-294 KRYLFYDGES VSGKVNLAFQ QPGKRLEHQG IGIEFVGQIE LFNDKSNTHE BACU000736/1-299 KCYLFYDGES VSGKVNLAFQ QPGKRLEHQG IRIEFAGQTE LFNDKSNTHE 151 200 ENSTTRP00000007738/1-327 FVNLVKELAL PGELTQSRSY DFEFMQVEKP YESYIGANVR LRYFLKVTIV ENSP00000362480/1-327 FVNLVKELAL PGELTQSRSY DFEFMQVEKP YESYIGANVR LRYFLKVTIV ENSBTAP00000022455/1-327 FVNLVKELAL PGELTQSRSY DFEFMQVEKP YESYIGANVR LRYFLKVTIV bmy_20511T0/1-294 FVNLMKELAL PGELTQSRSY DFAFMQVEKP CESYIGANVC LRYFLKVTIV BACU000736/1-299 FVNLVKELAL PGELTQTRSY DFAFMQVEKP CKSYIGANVC LRYFLKVTIV 201 250 ENSTTRP00000007738/1-327 RRLTDLVKEY DLIVHQLATY PDVNNSIKME VGIEDCLHIE FEYNKSKYHL ENSP00000362480/1-327 RRLTDLVKEY DLIVHQLATY PDVNNSIKME VGIEDCLHIE FEYNKSKYHL ENSBTAP00000022455/1-327 RRLTDLVKEY DLIVHQLATY PDVNNSIKME VGIEDCLHIE FEYNKSKYHL bmy_20511T0/1-294 RRLTDLVKEY DLIXHQLATY PDVNNSIKME VGTEDCLHIE FEYNKSKYHL BACU000736/1-299 RRLTDLVKDY DLIVHQLATY PDVNNSIKME VGTEDCLHIE FEYNKSKYHL 251 300 ENSTTRP00000007738/1-327 KDVIVGKIYF LLVRIKIQHM ELQLIKKEIT GIGPSTTTET ETIAKYEIMD ENSP00000362480/1-327 KDVIVGKIYF LLVRIKIQHM ELQLIKKEIT GIGPSTTTET ETIAKYEIMD ENSBTAP00000022455/1-327 KDVIVGKIYF LLVRIKIQHM ELQLIKKEIT GIGPSTTTET ETIAKYEIMD bmy_20511T0/1-294 KDVTVGKIYF LLVRIKIQHM ELQLIKKEIT GIGPSATTE- ---------- BACU000736/1-299 KDVTVGKIYF LLVRIKIQHM ELQLIKKEIT GIGPSATTET ETIAKYEIMD 301 350 ENSTTRP00000007738/1-327 GAPVKGESIP IRLFLAGYDP TPTMRDVNKK FSVRYFLNLV LVDEEDRRYF ENSP00000362480/1-327 GAPVKGESIP IRLFLAGYDP TPTMRDVNKK FSVRYFLNLV LVDEEDRRYF ENSBTAP00000022455/1-327 GAPVKGESIP IRLFLAGYDP TPTMRDVNKK FSVRYFLNLV LVDEEDRRYF bmy_20511T0/1-294 ---------- ---------- ---------- ---------- --NRNDR--- BACU000736/1-299 GTPVKGESTP IRLFLAGSDP TPTMRDVNKK FSVRYFLILA LVDEEDRTYF 351 400 ENSTTRP00000007738/1-327 KQQEIILWRK APEKLRKQRT NFHQRFESPE SQASAEQPEM ENSP00000362480/1-327 KQQEIILWRK APEKLRKQRT NFHQRFESPE SQASAEQPEM ENSBTAP00000022455/1-327 KQQEIILWRK APEKLRKQRT NFHQRFESPE SQASAEQPEM bmy_20511T0/1-294 ---------- ---------- ---------- ---------- BACU000736/1-299 KQQEIILWRK APEKLRKQRA NSHQRFESPE SQASAEQPEM