KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:27 2014 Check: 00 .. Name: BACU001960/1-470 Len: 585 Check: 7372 Weight: 1.00 Name: ENSTTRP00000013969/1-585 Len: 585 Check: 9476 Weight: 1.00 Name: ENSP00000355187/1-581 Len: 585 Check: 5139 Weight: 1.00 Name: ENSBTAP00000022459/1-536 Len: 585 Check: 7025 Weight: 1.00 Name: bmy_08970T0/1-513 Len: 585 Check: 3287 Weight: 1.00 // 1 50 BACU001960/1-470 ---------- ---------- ---------- ---------- -------MVY ENSTTRP00000013969/1-585 TIQRMGFNVI RLLSGSAVAL VIAPTVLLTM LSSAERGCPK GCRCEGKMVY ENSP00000355187/1-581 ----MGFNVI RLLSGSAVAL VIAPTVLLTM LSSAERGCPK GCRCEGKMVY ENSBTAP00000022459/1-536 ----MGFNVI RLLSGSAVAL VIAPTVLLTM LSSAERGCPK GCRCEGKMVY bmy_08970T0/1-513 ----MGFNVI RLLSGSAVAL VIAPTVLLTM LSSAERGCPK GCRCEGKMVY 51 100 BACU001960/1-470 CESQKLQEIP SSISAGCLGL SLRYNSLQKL KYNQFKGLNQ LTWLYLDHNH ENSTTRP00000013969/1-585 CESQKLQEIP SSISAGCLGL SLRYNSLQKL KYNQFKGLNQ LTWLYLDHNH ENSP00000355187/1-581 CESQKLQEIP SSISAGCLGL SLRYNSLQKL KYNQFKGLNQ LTWLYLDHNH ENSBTAP00000022459/1-536 CESQKLQEIP SSISAGCLGL SLRYNSLQKL KYNQFKGLNQ LTWLYLDHNH bmy_08970T0/1-513 CESQKLQEIP SSISAGCLGL SLRYNSLQKL KYNQFKGLNQ LTWLYLDHNH 101 150 BACU001960/1-470 ISNIDENAFN GIRRLKELIL SSNRISYFLN NTFRPVTNLR NLDLSYNQLH ENSTTRP00000013969/1-585 ISNIDENAFN GIRRLKELIL SSNRISYFLN NTFRPVTNLR NLDLSYNQLH ENSP00000355187/1-581 ISNIDENAFN GIRRLKELIL SSNRISYFLN NTFRPVTNLR NLDLSYNQLH ENSBTAP00000022459/1-536 ISNIDENAFN GIRRLKELIL SSNRISYFLN NTFRPVTNLR NLDLSYNQLH bmy_08970T0/1-513 ISNIDENAFN GIRRLKELIL SSNRISYFLN NTFRPVTNLR NLDLSYNQLH 151 200 BACU001960/1-470 SLGSEQFRGL RKLLSLHLRS NSLRTIPVRI FQDCRNLELL DLGYNRIRSL ENSTTRP00000013969/1-585 SLGSEQFRGL RKLLSLHLRS NSLRNIPVRI FQDCRNLELL DLGYNRIRSL ENSP00000355187/1-581 SLGSEQFRGL RKLLSLHLRS NSLRTIPVRI FQDCRNLELL DLGYNRIRSL ENSBTAP00000022459/1-536 SLGSEQFRGL RKLLSLHLRS NSLRTIPVRI FQDCRNLELL DLGYNRIRSL bmy_08970T0/1-513 SLGSEQFRGL RKLLSLHLRS NSLRTIPVRI FQDCRNLELL DLGYNRIRSL 201 250 BACU001960/1-470 ARNVFAGMIR LKELHLEHNQ FSKLNLALFP RLVSLQNLYL QWNKISVIGQ ENSTTRP00000013969/1-585 ARNVFAGMIR LKELHLEHNQ FSKLNLALFP RLVSLQNLYL QWNKISVIGQ ENSP00000355187/1-581 ARNVFAGMIR LKELHLEHNQ FSKLNLALFP RLVSLQNLYL QWNKISVIGQ ENSBTAP00000022459/1-536 ARNVFAGMIR LKELHLEHNQ FSKLNLALFP RLVSLQNLYL QWNKISVIGQ bmy_08970T0/1-513 ARNVFAGMIR LKELHLEHNQ FSKLNLALFP RLVSLQNLYL QWNKISVIGQ 251 300 BACU001960/1-470 TMSWTWSSLQ RLDLSGNEIE AFSGPSVFQC VPNLQRLNLD SNKLTFIGQE ENSTTRP00000013969/1-585 TMSWTWSSLQ RLDLSGNEIE AFSGPSVFQC VPNLQRLNLD SNKLTFIGQE ENSP00000355187/1-581 TMSWTWSSLQ RLDLSGNEIE AFSGPSVFQC VPNLQRLNLD SNKLTFIGQE ENSBTAP00000022459/1-536 TMSWTWSSLQ RLDLSGNEIE AFSGPSVFQC VPNLQRLNLD SNKLTFIGQE bmy_08970T0/1-513 TMSWTWSSLQ RLDLSGNEIE AFSGPSVFQC VPNLQRLNLD SNKLTFIGQE 301 350 BACU001960/1-470 ILDSWISLND ISLAGNIWEC SRNICSLVNW LKSFKGLREN TIICASPKEL ENSTTRP00000013969/1-585 ILDSWISLND ISLAGNIWEC SRNICSLVNW LKNFKGLREN TIICASPKEL ENSP00000355187/1-581 ILDSWISLND ISLAGNIWEC SRNICSLVNW LKSFKGLREN TIICASPKEL ENSBTAP00000022459/1-536 ILDSWISLND ISLAGNIWEC SRNICSLVNW LKSFKGLREN TIICASPKEL bmy_08970T0/1-513 ILDSWISLND ISLAGNIWEC SRNICSLVNW LKSFKGLREN TIICASPKEL 351 400 BACU001960/1-470 QGVNVIDAVK NYSICGKSTT ERFDLARALP KPTFKPKLPR PKHESKPPLP ENSTTRP00000013969/1-585 QGVNVIDAVK NYSICGKSTT ERFDLARALP KPTFKPKLPR PKHESKPPLP ENSP00000355187/1-581 QGVNVIDAVK NYSICGKSTT ERFDLARALP KPTFKPKLPR PKHESKPPLP ENSBTAP00000022459/1-536 QGVNVIDAVK NYSICGKSTT ERFDLARALP KPTFKPKLPR PKHESKPPLP bmy_08970T0/1-513 QGVNVIDAVK NYSICGKSTT ERFDLARALP KPTFKPKLPR PKHESKPPLP 401 450 BACU001960/1-470 PTAGATEPGP ETEADAEHIS FHKIIAGSVA LFLSVLVILL VIYVSWKRYP ENSTTRP00000013969/1-585 PTVGATEPGP ETDADTEHIS FHKIIAGSVA LFLSVLVILL VIYVSWKRYP ENSP00000355187/1-581 PTVGATEPGP ETDADAEHIS FHKIIAGSVA LFLSVLVILL VIYVSWKRYP ENSBTAP00000022459/1-536 PTVGATEPGP ETDADTEHIS FHKIIAGSVA LFLSVLVILL VIYVSWKRYP bmy_08970T0/1-513 PTVGATEPGP ETDADTEHIS FHKIIAGSVA LFLSVLVILL VIYVSWKRYP 451 500 BACU001960/1-470 ASMKQLQQRS LMRRHRKKKR QSLKQMTPST QEFYVDYKPT NTETSEMLLN ENSTTRP00000013969/1-585 ASMKQLQQRS LMRRHRKKKR QSLKQMTPST QEFYVDYKPT NTETSEMLLN ENSP00000355187/1-581 ASMKQLQQRS LMRRHRKKKR QSLKQMTPST QEFYVDYKPT NTETSEMLLN ENSBTAP00000022459/1-536 ASMKQLQQRS LMRRHRKKKR QSLKQMTPST QEFYVDYKPT NTETSEMLLN bmy_08970T0/1-513 ASMKQLQQRS LMRRHRKKKR QSLKQMTPST QEFYVDYKPT NTETSEMLLN 501 550 BACU001960/1-470 GTGPCTYNKS GSRECEV--- ---------- ---------- ---------- ENSTTRP00000013969/1-585 GTGPCTYNKS GSRECEIPLS MNVSTFLAYD QPTISYCGVH HELLSHKSFE ENSP00000355187/1-581 GTGPCTYNKS GSRECEIPLS MNVSTFLAYD QPTISYCGVH HELLSHKSFE ENSBTAP00000022459/1-536 GTGPCTYNKS GSRECE---- ---------D CPKIIHTLPT QGFSNQIYFS bmy_08970T0/1-513 GTGPCTYNKS GSRECEV--- ---------- ---------- ---------- 551 600 BACU001960/1-470 ---------- ---------- ---------- ----- ENSTTRP00000013969/1-585 TNAQEDTMET HLETELDLST ITTAGRISDH KQQLA ENSP00000355187/1-581 TNAQEDTMET HLETELDLST ITTAGRISDH KQQLA ENSBTAP00000022459/1-536 SPY------- ---------- ---------- ----- bmy_08970T0/1-513 ---------- ---------- ---------- -----