KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:29 2014 Check: 00 .. Name: ENSTTRP00000014962/1-1253 Len: 1308 Check: 1709 Weight: 1.00 Name: BACU009935/1-1272 Len: 1308 Check: 6912 Weight: 1.00 Name: bmy_14943T0/1-978 Len: 1308 Check: 1928 Weight: 1.00 Name: ENSP00000324549/1-1253 Len: 1308 Check: 2908 Weight: 1.00 Name: ENSBTAP00000022470/1-1285 Len: 1308 Check: 2249 Weight: 1.00 // 1 50 ENSTTRP00000014962/1-1253 ---------- ---------- -MAAQVTLED ALSNVDLLEE LPLPDQQPCI BACU009935/1-1272 MEPGQAASGS VCGGQAFPAG RMAAQVTLED ALSNVDLLEE LPLPDQQPCI bmy_14943T0/1-978 ---------- ---------- ---------- ---------- ---------- ENSP00000324549/1-1253 ---------- ---------- -MAAQVTLED ALSNVDLLEE LPLPDQQPCI ENSBTAP00000022470/1-1285 ---------- ---------- -MAAQVTLED ALSNVDLLEE LPLPDQQPCI 51 100 ENSTTRP00000014962/1-1253 EPPPSSLLYQ PNFNTNFEDR NAFVTGIARY IEQATVHSSM NEMLEEGQEY BACU009935/1-1272 EPPPSSLLYQ PNFNTNFEDR NAFVTGIARY IEQATVHSSM NEMLEEGQEY bmy_14943T0/1-978 ---------- ---------- ---------- ---------- ---------- ENSP00000324549/1-1253 EPPPSSLLYQ PNFNTNFEDR NAFVTGIARY IEQATVHSSM NEMLEEGQEY ENSBTAP00000022470/1-1285 EPPPSSLLYQ PNFNTNFEDR NAFVTGIARY IEQATVHSSM NEMLEEGQEY 101 150 ENSTTRP00000014962/1-1253 AVMLYTWRSC SRAIPQVKCN EQPNRVEIYE KTVEVLEPEV TKLMNFMYFQ BACU009935/1-1272 AVMLYTWRSC SRAIPQVKCN EQPNRVEIYE KTVEVLEPEV TKLMNFMYFQ bmy_14943T0/1-978 ---------- ---------- ---------- ---------- ---------- ENSP00000324549/1-1253 AVMLYTWRSC SRAIPQVKCN EQPNRVEIYE KTVEVLEPEV TKLMNFMYFQ ENSBTAP00000022470/1-1285 AVMLYTWRSC SRAIPQVKCN EQPNRVEIYE KTVEVLEPEV TKLMNFMYFQ 151 200 ENSTTRP00000014962/1-1253 RNAIERFCGE VRRLCHAERR KDFVSEAYLI TLGKFINMFA VLDELKNMKC BACU009935/1-1272 RNAIERFCGE VRRLCHAERR KDFVSEAYLI TLGKFINMFA VLDELKNMKC bmy_14943T0/1-978 ---------- ---------- ---------- ---------- ---------- ENSP00000324549/1-1253 RNAIERFCGE VRRLCHAERR KDFVSEAYLI TLGKFINMFA VLDELKNMKC ENSBTAP00000022470/1-1285 RNAIERFCGE VRRLCHAERR KDFVSEAYLI TLGKFINMFA VLDELKNMKC 201 250 ENSTTRP00000014962/1-1253 SVKNDHSAYK RAAQFLRKMA DPQSIQESQN LSMFLANHNK ITQSLQQQLE BACU009935/1-1272 SVKNDHSAYK RAAQFLRKMA DPQSIQESQN LSMFLANHNK ITQSLQQQLE bmy_14943T0/1-978 ---------- ---------- ---------- ---------- ---------- ENSP00000324549/1-1253 SVKNDHSAYK RAAQFLRKMA DPQSIQESQN LSMFLANHNK ITQSLQQQLE ENSBTAP00000022470/1-1285 SVKNDHSAYK RAAQFLRKMA DPQSIQESQN LSMFLANHNK ITQSLQQQLE 251 300 ENSTTRP00000014962/1-1253 VISGYEELLA DIVNLCVDCY ENRMYLTPSE KHMLLKVMGF GLYLMDGSVS BACU009935/1-1272 VISGYEELLA DIVNLCVDYY ENRMYLTPSE KHMLLKVMGF GLYLMDGSVS bmy_14943T0/1-978 ---------- ---------- ---------- -------MGF GLYLMDGSVS ENSP00000324549/1-1253 VISGYEELLA DIVNLCVDYY ENRMYLTPSE KHMLLKVMGF GLYLMDGSVS ENSBTAP00000022470/1-1285 VISGYEELLA DIVNLCVDYY ENRMYLTPSE KHMLLKVMGF GLYLMDGSVS 301 350 ENSTTRP00000014962/1-1253 NIYKLDAKKR INLSKIDKYF KQLQVVPLFG DMQIELARYI KTSAHYEENK BACU009935/1-1272 NIYKLDAKKR INLSKIDKYF KQLQVVPLFG DMQIELARYI KTSAHYEENK bmy_14943T0/1-978 NIYKLDAKKR INLSKIDKYF KQLQVVPLFG DMQIELARYI KTSAHYEENK ENSP00000324549/1-1253 NIYKLDAKKR INLSKIDKYF KQLQVVPLFG DMQIELARYI KTSAHYEENK ENSBTAP00000022470/1-1285 NIYKLDAKKR INLSKIDKYF KQLQVVPLFG DMQIELARYI KTSAHYEENK 351 400 ENSTTRP00000014962/1-1253 SRWTCTSSSS SPQYNICEQM VQIREDHMRF ISELARYSNS EVVTGSGRQE BACU009935/1-1272 SRWTCTSSGS SPQYNICEQM VQIREDHMRF ISELARYSNS EVVTGSGRQE bmy_14943T0/1-978 SRWTCTSSGS SPQYNICEQM VQIREDHMRF ISELARYSNS EVVTGSGRQE ENSP00000324549/1-1253 SRWTCTSSGS SPQYNICEQM IQIREDHMRF ISELARYSNS EVVTGSGRQE ENSBTAP00000022470/1-1285 SRWTCTSSSS SPQYNICEQM VQIREDHMRF ISELARYSNS EVVTGSGRQE 401 450 ENSTTRP00000014962/1-1253 AQKTDAEYRK LFDLALQGLQ LLSQWSAHVM EVYSWKLVHP TDKYSNKDCP BACU009935/1-1272 AQKTDAEYRK LFDLALQGLQ LLSQWSAHVM EVYSWKLVHP TDKYSNKDCP bmy_14943T0/1-978 AQKTDAEYRK LFDLALQGLQ LLSQWSAHVM EVYSWKLVHP TDKYSNKDCP ENSP00000324549/1-1253 AQKTDAEYRK LFDLALQGLQ LLSQWSAHVM EVYSWKLVHP TDKYSNKDCP ENSBTAP00000022470/1-1285 AQKTDAEYRK LFDLALQGLQ LLSQWSAHVM EVYSWKLVHP TDKYSNKDCP 451 500 ENSTTRP00000014962/1-1253 DNAEEYERAT RYNYTSEEKF ALVEVIAMIK GLQVLMGRME SVFNHAIRHT BACU009935/1-1272 DNAEEYERAT RYNYTSEEKF ALVEVIAMIK GLQVLMGRME SVFNHAIRHT bmy_14943T0/1-978 DNAEEYERAT RYNYTSEEKF ALVEVIAMIK GLQVLMGRME SVFNHAIRHT ENSP00000324549/1-1253 DSAEEYERAT RYNYTSEEKF ALVEVIAMIK GLQVLMGRME SVFNHAIRHT ENSBTAP00000022470/1-1285 DNAEEYERAT RYNYTSEEKF ALVEVIAMIK GLQVLMGRME SVFNHAIRHT 501 550 ENSTTRP00000014962/1-1253 VYAALQDFSQ VTLREPLRQA IKKKKNV--I QSVLQAIRKT VCDWETGHEP BACU009935/1-1272 VYAALQDFSQ VTLREPLRQA IKKKKNV--I QSVLQAIRKT VCDWETGHEP bmy_14943T0/1-978 VYAALQDFSQ VTLREPLRQA IKKKKNLDGL FSVLQAIRKT VCDWETGHEP ENSP00000324549/1-1253 VYAALQDFSQ VTLREPLRQA IKKKKNV--I QSVLQAIRKT VCDWETGHEP ENSBTAP00000022470/1-1285 VYAALQDFSQ VTLREPLRQA IKKKKNV--I QSVLQAIRKT VCDWETGHEP 551 600 ENSTTRP00000014962/1-1253 FNDPALRGEK DPKSGFDIKV PRRAVGPSST Q--------- ---------- BACU009935/1-1272 FNDPALRGEK DPKSGFDIKV PRRAVGPSST Q--------- ---------- bmy_14943T0/1-978 FNDPALRGEK DPKSGFDIKV PRRAVGPSST Q--------- ---------- ENSP00000324549/1-1253 FNDPALRGEK DPKSGFDIKV PRRAVGPSST Q--------- ---------- ENSBTAP00000022470/1-1285 FNDPALRGEK DPKSGFDIKV PRRAVGPSST QVLVPCSTEW GDRELGRWWE 601 650 ENSTTRP00000014962/1-1253 ---------- --LYMVRTML ESLIADKSGS KKTLRSSLEG PTILDIEKFH BACU009935/1-1272 ---------- --LYLVRTMA ESL--SSAEL LRQLKSVGTE RLLHVVNAFL bmy_14943T0/1-978 ---------- --LYMVRTML ESLIADKSGS KKTLRSSLEG PTILDIEKFH ENSP00000324549/1-1253 ---------- --LYMVRTML ESLIADKSGS KKTLRSSLEG PTILDIEKFH ENSBTAP00000022470/1-1285 AGSETTSPWP STLYMVRTML ESLIADKSGS KKTLRSSLEG PTILDIEKFH 651 700 ENSTTRP00000014962/1-1253 RESFFYTHLI NFSETLQQCC DLSQLWFREF FLELTMGRRI QFPIEMSMPW BACU009935/1-1272 RQSYTYPPLL TFGETLQQCC DLSQLWFREF FLELTMGRRI QFPIEMSMPW bmy_14943T0/1-978 RESFFYTHLI NFSETLQQCC DLSQLWFREF FLELTMGRRI QFPIEMSMPW ENSP00000324549/1-1253 RESFFYTHLI NFSETLQQCC DLSQLWFREF FLELTMGRRI QFPIEMSMPW ENSBTAP00000022470/1-1285 RESFFYTHLI NFSETLQQCC DLSQLWFREF FLELTMGRRI QFPIEMSMPW 701 750 ENSTTRP00000014962/1-1253 ILTDHILETK EASMMEYVLY SLDLYNDSAH YALTRFNKQF LYDEIEAEVN BACU009935/1-1272 ILTDHILETK EASMMEYVLY SLDLYNDSAH YALTRFNKQF LYDEIEAEVN bmy_14943T0/1-978 ILTDHILETK EASMMEYVLY SLDLYNDSAH YALTRFNKQF LYDEIEAE-- ENSP00000324549/1-1253 ILTDHILETK EASMMEYVLY SLDLYNDSAH YALTRFNKQF LYDEIEAEVN ENSBTAP00000022470/1-1285 ILTDHILETK EASMMEYVLY SLDLYNDSAH YALTRFNKQF LYDEIEAEVN 751 800 ENSTTRP00000014962/1-1253 LCFDQFVYKL ADQIFAYYKV MAGSLLLDKR LRSECKNQGA TIHLPPSNRY BACU009935/1-1272 LCFDQFVYKL ADQIFAYYKV MAGSLLLDKR LRSECKNQGA TIHLPPSNRY bmy_14943T0/1-978 ---------L ADQIFAYYKV MAGSLLLDKR LRSECKNQGA TIHLPPSNRY ENSP00000324549/1-1253 LCFDQFVYKL ADQIFAYYKV MAGSLLLDKR LRSECKNQGA TIHLPPSNRY ENSBTAP00000022470/1-1285 LCFDQFVYKL ADQIFAYYKV MAGSLLLDKR LRSECKNQGA TIHLPPSNRY 801 850 ENSTTRP00000014962/1-1253 ETLLKQRHVQ LLGRSIDLNR LITQRVSTAM YKSLELAIGR FESEDLTSIV BACU009935/1-1272 ETLLKQRHVQ LLGRSIDLNR LITQRVSTAM YKSLELAIGR FESEDLTSIV bmy_14943T0/1-978 ETLLKQRHVQ LLGRSIDLNR LITQRVSTAM YKSLELAIGR FESEDLTSIV ENSP00000324549/1-1253 ETLLKQRHVQ LLGRSIDLNR LITQRVSAAM YKSLELAIGR FESEDLTSIV ENSBTAP00000022470/1-1285 ETLLKQRHVQ LLGRSIDLNR LITQRVSAAM YKSLELAIGR FESEDLTSIV 851 900 ENSTTRP00000014962/1-1253 ELDGLLEINR MTHRLLSRYL TLDSFDAMFR EANHNVSAPY GRITLHVFWE BACU009935/1-1272 ELDGLLEINR MTHKLLSRYL TLDSFDAMFR EANHNVSAPY GRITLHVFWE bmy_14943T0/1-978 ELDGLLEINR MTHKLLSRYL TLDSFDAMFR EANHNVSAPY GRITLHVFWE ENSP00000324549/1-1253 ELDGLLEINR MTHKLLSRYL TLDGFDAMFR EANHNVSAPY GRITLHVFWE ENSBTAP00000022470/1-1285 ELDGLLEINR MTHKLLSKYL TLDSFDAMFR EANHNVSAPY GRITLHVFWE 901 950 ENSTTRP00000014962/1-1253 LNYDFLPNYC YNGSTNRFVR TVLPFSQEFQ RDKQPNAQPQ YLHGSKALNL BACU009935/1-1272 LNYDFLPNYC YNGSTNRFVR TVLPFSQEFQ RDKQPNAQPQ YLHGSKALNL bmy_14943T0/1-978 LNYDFLPNYC YNGSTNRFVR TVLPFSQEFQ RDKQPNAQPQ YLHGSKALNL ENSP00000324549/1-1253 LNYDFLPNYC YNGSTNRFVR TVLPFSQEFQ RDKQPNAQPQ YLHGSKALNL ENSBTAP00000022470/1-1285 LNYDFLPNYC YNGSTNRFVR TVLPFSQEFQ RDKQPNAQPQ YLHGSKALNL 951 1000 ENSTTRP00000014962/1-1253 AYSSIYGSYR NFVGPPHFQV ICRLLGYQGI AVVMEELLKV VKSLXXXXXX BACU009935/1-1272 AYSSIYGSYR NFVGPPHFQV ICRLLGYQGI AVVMEELLKV VKSLLQGTIL bmy_14943T0/1-978 AYSSIYGSYR NFVGPPHFQV ICRLLGYQGI AVVMEELLKV VKSLLQGTIL ENSP00000324549/1-1253 AYSSIYGSYR NFVGPPHFQV ICRLLGYQGI AVVMEELLKV VKSLLQGTIL ENSBTAP00000022470/1-1285 AYSSIYGSYR NFVGPPHFQV ICRLLGYQGI AVVMEELLKV VKSLLQGTIL 1001 1050 ENSTTRP00000014962/1-1253 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU009935/1-1272 QYVKTLMEVM PKVCRLPRHE YGSPGILEFF HHQLKDIVEY AELKTVCFQN bmy_14943T0/1-978 QYVKTLMEVM PKVCRLPRHE YGSPGILEFF HHQLKDIVEY AELKTVCFQN ENSP00000324549/1-1253 QYVKTLMEVM PKICRLPRHE YGSPGILEFF HHQLKDIVEY AELKTVCFQN ENSBTAP00000022470/1-1285 QYVKTLMEVM PKVCRLPRHE YGSPGILEFF HHQLKDIVEY AELKTVCFQN 1051 1100 ENSTTRP00000014962/1-1253 XXXXXXXXXX XXXXXXXXSL EEVCDLLHAA PFQNILPRVH VK-EGERLDA BACU009935/1-1272 LREVGNAILF CLLIEQSLSL EEVCDLLHAA PFQNILPRVH VK-EGERLDA bmy_14943T0/1-978 LREVGNAILF CLLIEQSLSL EEVCDLLHAA PFQNILPRVH VK-EGERLDA ENSP00000324549/1-1253 LREVGNAILF CLLIEQSLSL EEVCDLLHAA PFQNILPRVH VK-EGERLDA ENSBTAP00000022470/1-1285 LREVGNAVLF CLLIEQSLSL EEVCDLLHAA PFQNILPRVH VKVEGERLDA 1101 1150 ENSTTRP00000014962/1-1253 KMKRLESKYA PLHLVPLIER LGTPQQIAIA REGDLLTKER LCCGLSMFEV BACU009935/1-1272 KMKRLESKYA PLHLVPLIER LGTPQQIAIA REGDLLTKER LCCGLSMFEV bmy_14943T0/1-978 KMKRLESKYA PLHLVPLIER LGTPQQIAIA REGDLLTKER LCCGLSMFEV ENSP00000324549/1-1253 KMKRLESKYA PLHLVPLIER LGTPQQIAIA REGDLLTKER LCCGLSMFEV ENSBTAP00000022470/1-1285 KMKRLESKYA PLHLVPLIER LGTPQQIAIA REGDLLTKER LCCGLSMFEV 1151 1200 ENSTTRP00000014962/1-1253 ILTRIRTFLD DPIWRGPLPS NGVMHVDDCV EFHRLWSAMQ FVYCIPVGTH BACU009935/1-1272 ILARIRAFLD DPIWRGPLPS NGVMHVDDCV EFHRLWSAMQ FVYCIPVGTH bmy_14943T0/1-978 ILTRIRTFLD DPIWRGPLPS NGVMHVDDCV EFHRLWSAMQ FVYCIPVGTH ENSP00000324549/1-1253 ILTRIRSFLD DPIWRGPLPS NGVMHVDECV EFHRLWSAMQ FVYCIPVGTH ENSBTAP00000022470/1-1285 ILTRIRTFLD DSIWRGPLPS NGVMHVDDCV EFHRLWSAMQ FVYCIPVGTH 1201 1250 ENSTTRP00000014962/1-1253 EFTVEQCFGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU009935/1-1272 EFTVEQCFGD GLHWAGCMII VLLGQQRRFA VLDFCYHLLK VQKHDGKDEI bmy_14943T0/1-978 EFTVEQCFGD GLHWAGCMII VLLGQQRRFA VLDFCYHLLK VQKHDGKDEI ENSP00000324549/1-1253 EFTVEQCFGD GLHWAGCMII VLLGQQRRFA VLDFCYHLLK VQKHDGKDEI ENSBTAP00000022470/1-1285 EFTVEQCFGD GLHWAGCMII ALLGQQRRFA VLDFCYHLLK VQKHDGKDEI 1251 1300 ENSTTRP00000014962/1-1253 XXXXPLKKMV ERIRKFQILN DEIITILDKY LKSGDGESTP VEHVRCFQPP BACU009935/1-1272 IKNVPLKKMV ERIRKFQILN DEIITILDKY LKSGDGESTP VEHVRCFQPP bmy_14943T0/1-978 IKNVPLKKMV ERIRKFQILN DEIITILDKY LKSGDGESTP VEHVRCFQPP ENSP00000324549/1-1253 IKNVPLKKMV ERIRKFQILN DEIITILDKY LKSGDGEGTP VEHVRCFQPP ENSBTAP00000022470/1-1285 IKNVPLKKMV ERIRKFQILN DEIITILDKY LKSGDGESTP VEHVRCFQPP 1301 1350 ENSTTRP00000014962/1-1253 IHQSLASS BACU009935/1-1272 IHQSLASS bmy_14943T0/1-978 IHQSLASS ENSP00000324549/1-1253 IHQSLASS ENSBTAP00000022470/1-1285 IHQSLASS