KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:30 2014 Check: 00 .. Name: BACU001844/1-393 Len: 491 Check: 967 Weight: 1.00 Name: ENSTTRP00000004079/1-387 Len: 491 Check: 6064 Weight: 1.00 Name: bmy_12183T0/1-459 Len: 491 Check: 5962 Weight: 1.00 Name: ENSP00000409555/1-391 Len: 491 Check: 8156 Weight: 1.00 Name: ENSBTAP00000022472/1-389 Len: 491 Check: 2824 Weight: 1.00 // 1 50 BACU001844/1-393 ---------- ---------- ---------- ---------- -----MEPEP ENSTTRP00000004079/1-387 ---------- ---------- ---------- ---------- -----MEPEP bmy_12183T0/1-459 RGAYKRCPRR ARAIQRGEPF LWGLGWQRHF LPGVWERRRA HSAVDMEPEP ENSP00000409555/1-391 ---------- ---------- ---------- ---------- -MESETEPEP ENSBTAP00000022472/1-389 ---------- ---------- ---------- ---------- ---MEPEPEP 51 100 BACU001844/1-393 VTLLVKSPIQ RHRDLELSGD RSWSVSRLKA HLSRVYPERP ---------- ENSTTRP00000004079/1-387 VTLLVKSPNQ RHRDLELSVD RSWSVSRLKA HLSRVYPERP HP-------- bmy_12183T0/1-459 VTLLVKSPNQ RHRDLELSGD RSWSVSRLKA HLSRVYPERP KAISLGVKKS ENSP00000409555/1-391 VTLLVKSPNQ RHRDLELSGD RGWSVGHLKA HLSRVYPERP RP-------- ENSBTAP00000022472/1-389 VTLLVKSPNQ RHRDLELSAD RSWSVGRLKA HLSRVYPARP RP-------- 101 150 BACU001844/1-393 ---------- ---------- ---------- ---------- ---LENRHVL ENSTTRP00000004079/1-387 ----EDQRLI Y--------- ---SGKLLLD HQCLRDLLP- --KQETRHVL bmy_12183T0/1-459 ASGGPEVNLF WEAVVGSPVS QGLASKALIR LNSGPKVPPY YFQQENRHVL ENSP00000409555/1-391 ----EDQRLI Y--------- ---SGKLLLD HQCLRDLLP- --KQEKRHVL ENSBTAP00000022472/1-389 ----EDQRLI Y--------- ---SGKLLLD HQCLRDLLP- --KQEKRHVM 151 200 BACU001844/1-393 HLVCSVKSPS KMPEASTKVA ESIEQPAGLN QGQSPGNSSS DGLRQREVVR ENSTTRP00000004079/1-387 HLVCSVKSPS KMPEASAKVA ESIEQPAGLN QGQSPGDSSS DGLRQREVVR bmy_12183T0/1-459 HLVCSVKSPS KMPEASTKVA ESIEQPAGLN QGQSPGDSSS DGLRQREVVR ENSP00000409555/1-391 HLVCNVKSPS KMPEINAKVA ESTEEPAGSN RGQYPEDSSS DGLRQREVLR ENSBTAP00000022472/1-389 HLVCNVKSTS KMPEAGAKVA ESTEQPTGLN QGQSPGDSSS DGLRQREVLR 201 250 BACU001844/1-393 NPSPSGWENI SRPEAVQPAF QGLGPGFSGY TTYGWLQLSW FQQIYARQYY ENSTTRP00000004079/1-387 NPSPSGWENI SRPEAAQPAF QGLGPGFSGY TTYGWLQLSW FQQIYARQYY bmy_12183T0/1-459 NPSPSGWENI SRPEAVQPAF QGLGPGFSGY TTYGWLQLSW FQQIYARQYY ENSP00000409555/1-391 NLSSPGWENI SRPEAAQQAF QGLGPGFSGY TPYGWLQLSW FQQIYARQYY ENSBTAP00000022472/1-389 NPSPSGWESI SRPEAAQPAF QGLGPGFSGY TTYGWLQLSW FQQMYARQYY 251 300 BACU001844/1-393 MQYLAATAAS RAFVPSPSAQ EIPVVSAPAP APIHNQFPAE NQPANQNAAP ENSTTRP00000004079/1-387 MQYLAATAAS GAFVPSPSAQ EIPVVSAPAP APIHNQFPAE NQPANQNAAP bmy_12183T0/1-459 MQYLAATAAS RAFVPSPSAQ EIPVVSAPAP APIRNQFPAE NQPANQNAAP ENSP00000409555/1-391 MQYLAATAAS GAFVPPPSAQ EIPVVSAPAP APIHNQFPAE NQPANQNAAP ENSBTAP00000022472/1-389 MQYLAATAAS GAFVPAPSAQ EIPVVTAPTP APIHNQFPAE NQPANQNAAP 301 350 BACU001844/1-393 QVVVNPGANQ NLRMNAQGGP IVEEDDEINR DWLDWTYSAA TFSVFLSILY ENSTTRP00000004079/1-387 QVVVNPGANQ NLRMNAQGGP IVEEDDEINR DWLDWTYSAA TFSVFLSILY bmy_12183T0/1-459 QVVVNPGANQ NLRMNAQGGP IVEEDDEINR DWLDWTYSAA TFSVFLSILY ENSP00000409555/1-391 QVVVNPGANQ NLRMNAQGGP IVEEDDEINR DWLDWTYSAA TFSVFLSILY ENSBTAP00000022472/1-389 QVVVNPGANQ NLRMNAQGGP IVEEDDEINR DWLDWTYSAA TFSVFLSILY 351 400 BACU001844/1-393 FYSSLSRFLM VMGATVVMYL IVCTDEEDKA PDALPYFPLF SQHPDQPPVR ENSTTRP00000004079/1-387 FYSSLSRFLM VMGATVVMYL XXXX------ -----XXXXX XXXXXXXXXX bmy_12183T0/1-459 FYSSLSRFLM VMGATVVMYL HHVG------ -----WFPFR QRPVQNFPND ENSP00000409555/1-391 FYSSLSRFLM VMGATVVMYL HHVG------ -----WFPFR PRPVQNFPND ENSBTAP00000022472/1-389 FYSSLSRFLM VMGATVVMYL HHVG------ -----WFPFR QRPVQNFPND 401 450 BACU001844/1-393 RQQPACDSGS VWTNAPECYP SFHRLLLHLQ GERKPRWTKQ LFADFISFTL ENSTTRP00000004079/1-387 XXXXXXXXXX XXXXXXEDPD PEIADPNRLP PDRDVVDEEQ TSPSFMS-TA bmy_12183T0/1-459 GPPQEAANQD PNNNFQEDPD PEIADPNRLP PDRDVVDDEQ TSPSFMS-TA ENSP00000409555/1-391 GPPPDVVNQD PNNNLQEGTD PETEDPNHLP PDRDVLDGEQ TSPSFMS-TA ENSBTAP00000022472/1-389 GGPQEAVNQD PNNNFQGDPD PESEDPSHLP PDRDVRGDEQ TSPSFMS-TA 451 500 BACU001844/1-393 KLVLKGQICK EICIISNIIA NLVPTRAADI PSVGDIGWTF P ENSTTRP00000004079/1-387 WLVFK----- ------TFFA SLLPEGPPAI AN-------- - bmy_12183T0/1-459 WLVFK----- ------TFFA SLLPEGPPAI AN-------- - ENSP00000409555/1-391 WLVFK----- ------TFFA SLLPEGPPAI AN-------- - ENSBTAP00000022472/1-389 WLVFK----- ------TFFA SLLPEGPPAI AN-------- -