KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:17:30 2014 Check: 00 .. Name: bmy_16269T0/1-397 Len: 489 Check: 7530 Weight: 1.00 Name: ENSTTRP00000006187/1-355 Len: 489 Check: 8742 Weight: 1.00 Name: ENSP00000409231/1-418 Len: 489 Check: 5286 Weight: 1.00 Name: ENSBTAP00000022480/1-417 Len: 489 Check: 2397 Weight: 1.00 // 1 50 bmy_16269T0/1-397 ---------- ------MRLT KPTLFTNIPV TCEEKDLPGD LFNQLMRDDP ENSTTRP00000006187/1-355 ---------- ---------- ---------- ---------- ---------- ENSP00000409231/1-418 MEVNPPKQEH LLALKVMRLT KPTLFTNIPV TCEEKDLPGD LFNQLMRDDP ENSBTAP00000022480/1-417 MEVNPPKQEH LLALKVMRLT KPTLFTNIPV TCEEKDLPGD LFNQLMRDDP 51 100 bmy_16269T0/1-397 STVNGAEILM LGEM------ --NIFLGETF SSYISVHNDS NQVVKDILVK ENSTTRP00000006187/1-355 ---------- ---MLTLPQN FGNIFLGETF SSYISVHNDS NQVVKDILVK ENSP00000409231/1-418 STVNGAEVLM LGEMLTLPQN FGNIFLGETF SSYISVHNDS NQVVKDILVK ENSBTAP00000022480/1-417 STVNGAEILM LGEMLTLPQN FGNIFLGETF SSYISVHNDS NQVVKDILVK 101 150 bmy_16269T0/1-397 LG-------- ---------- ---------- ---------- ----VCSELY ENSTTRP00000006187/1-355 ADLQTSSQRL NLSASNAAVA ELKPDCCIDD VIHHEVKEIG THILVCAVSY ENSP00000409231/1-418 ADLQTSSQRL NLSASNAAVA ELKPDCCIDD VIHHEVKEIG THILVCAVSY ENSBTAP00000022480/1-417 ADLQTSSQRL NLSASNAAVA ELKPDCCIDD VIHHEVKEIG THILVCAVSY 151 200 bmy_16269T0/1-397 NSG------- ---WRKNVLK PLDVKTKFYN AESDLSSV-T DEVFLEAQIQ ENSTTRP00000006187/1-355 TTQGGEKMYF RKFFKFQVLK PLDVKTKFYN AEVSIADMTT DEVFLEAQIQ ENSP00000409231/1-418 TTQAGEKMYF RKFFKFQVLK PLDVKTKFYN AESDLSSV-T DEVFLEAQIQ ENSBTAP00000022480/1-417 TTQSGEKMYF RKFFKFQVLK PLDVKTKFYN AESDLSSV-T DEVFLEAQIQ 201 250 bmy_16269T0/1-397 NITTSPMFME KVSLEPSII- ---------- ----VTTFGS RAYLQPMDTR ENSTTRP00000006187/1-355 NITTSPMFME KVSLEPSIMY NVAELNSVNQ AGECVTTFGS RAYLQPMDTR ENSP00000409231/1-418 NMTTSPMFME KVSLEPSIMY NVTELNSVSQ AGECVSTFGS RAYLQPMDTR ENSBTAP00000022480/1-417 NITTSPMFME KVSLEPSIMY NVAELNSVNQ AGECVTTFGS RAYLQPMDTR 251 300 bmy_16269T0/1-397 QYLYCLKPKK EFAEKAGIIK GVTVIGKLDI VWKTNLGERG RLQTSQLQRM ENSTTRP00000006187/1-355 QYLYCLKPKK EFAEKAGIIK GVTVIGKLDI VWKTNLGERG RLQTSQLQRM ENSP00000409231/1-418 QYLYCLKPKN EFAEKAGIIK GVTVIGKLDI VWKTNLGERG RLQTSQLQRM ENSBTAP00000022480/1-417 QYLYCLKPKK EFAEKAGIIK GVTVIGKLDI VWKTNLGERG RLQTSQLQRM 301 350 bmy_16269T0/1-397 APGYGDVRLS LEAIPDTVNL EEPFHITCKI TNCREIRKKY SSFRITKIPT ENSTTRP00000006187/1-355 APGYGDVRLS LEAIPDTVNL EEPFHITCKI TNC-SERTM- ---------- ENSP00000409231/1-418 APGYGDVRLS LEAIPDTVNL EEPFHITCKI TNCSSERTM- ---------- ENSBTAP00000022480/1-417 APGYGDVRLS LEAIPDTVNL EEPFHITCKI TNC-SERTM- ---------- 351 400 bmy_16269T0/1-397 SPLFISVPGF LLDTQKRNSP TIVQEILQYL FVKGTRFILV FLIPPAVKGR ENSTTRP00000006187/1-355 --------DL VLEMCNTSSI H--------- ---------- ---------- ENSP00000409231/1-418 --------DL VLEMCNTNSI H--------- ---------- ---------- ENSBTAP00000022480/1-417 --------DL VLEMCNTNSI H--------- ---------- ---------- 401 450 bmy_16269T0/1-397 WISFWKCAIP VLSTGVAFQE DSLESSIQVP LSALPSLYCL QYRDCKYALF ENSTTRP00000006187/1-355 ----W-CGI- ---SGRQLGK LHPSSSLCLA LTLLSSVQGL Q--------- ENSP00000409231/1-418 ----W-CGI- ---SGRQLGK LHPSSSLCLA LTLLSSVQGL Q--------- ENSBTAP00000022480/1-417 ----W-CGI- ---SGRQLGK LHPSSSLCLA LTLLSSVQGL Q--------- 451 500 bmy_16269T0/1-397 SIISSVSGLR LTDTFLKRTY EYDDIAQVCV VSSAIKVES ENSTTRP00000006187/1-355 ----SVSGLR LTDTFLKRTY EYDDIAQVCV VSSAIKVES ENSP00000409231/1-418 ----SISGLR LTDTFLKRTY EYDDIAQVCV VSSAIKVES ENSBTAP00000022480/1-417 ----SVSGLR LTDTFLKRTY EYDDIAQVCV VSSAIKVES