KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:30 2014 Check: 00 .. Name: bmy_16270T0/1-192 Len: 304 Check: 4738 Weight: 1.00 Name: ENSP00000370395/1-304 Len: 304 Check: 7526 Weight: 1.00 Name: ENSBTAP00000022481/1-304 Len: 304 Check: 6672 Weight: 1.00 Name: BACU006227/1-125 Len: 304 Check: 4080 Weight: 1.00 Name: ENSTTRP00000006192/1-304 Len: 304 Check: 6753 Weight: 1.00 // 1 50 bmy_16270T0/1-192 ---------- ---------- ---------M LLIIKISSLS L--------- ENSP00000370395/1-304 MSSIKHLVYA VIRFLREQSQ MDTYTSDEQE SLEVAIQCLE TVFKISPEDT ENSBTAP00000022481/1-304 MSSIKHLVYA VIRFLREQSQ MDAYTSDEQE SLEVAIQCLE TVFKISAEDT BACU006227/1-125 MSSIKHLVYA VIRFLREQSQ MDAYTSDEQE SLEVAIQCLE TVFKISAEDT ENSTTRP00000006192/1-304 MSSIKHLVYA VIRFLREQSQ MDAYTSDEQE SLEVAIQCLE TVFKISAEDT 51 100 bmy_16270T0/1-192 ---------- ---------- ---------- ---------- ---------- ENSP00000370395/1-304 HLAVSQPLTE MFTSSFCKND VLPLSNSVPE DVGKADQLKD EGNNHMKEEN ENSBTAP00000022481/1-304 HLAVSQPLTE MFTNSFCKND ILPLSNSVPE DMGKADQLKD EGNNHMKEEN BACU006227/1-125 HLAVSQPLTE MFTNSFCKND ILPLSNSVPE DVGKADQLKD EGNNHMKEEN ENSTTRP00000006192/1-304 HLAVSQPLTE MFTNSFCKND ILPLSNSVPE DVGKADQLKD EGNNHMKEEN 101 150 bmy_16270T0/1-192 ---------- ---------- ----RAAAQS KLGHYTDAVK DCERAIAIDS ENSP00000370395/1-304 YAAAVDCYTQ AIELDPNNAV YYCNRAAAQS KLGHYTDAIK DCEKAIAIDS ENSBTAP00000022481/1-304 YAAAVDCYTQ AIELDSNNAV YYCNRAAAQS KLGHYTDAIK DCEKAIAIDS BACU006227/1-125 YAAAVDCYTQ AIELDPNNAV YYCNR----- ---------- ---------- ENSTTRP00000006192/1-304 YAAAVDCYTQ AIELDPNNAV YYCNRAAAQS KLCHYTDAVK DCEKAIAIDS 151 200 bmy_16270T0/1-192 KYSKAYGRMG LALTAMNKFE EAVTSYQKAL DLDPENDSYK SNLKIAEQKL ENSP00000370395/1-304 KYSKAYGRMG LALTALNKFE EAVTSYQKAL DLDPENDSYK SNLKIAEQKL ENSBTAP00000022481/1-304 KYSKAYGRMG LALTAMNKFQ EAVTSYQKAL DLDPENDSYK SNLKIAEQKL BACU006227/1-125 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006192/1-304 KYSKAYGRMG LALTAMNKFE EAVTSYQKAL DLDPENDSYK SNLKIAEQKL 201 250 bmy_16270T0/1-192 REVSSPTGTG LSFDMASLIN NPAFISMAAS LMQNPQVQQL MSGMMTNAIG ENSP00000370395/1-304 REVSSPTGTG LSFDMASLIN NPAFISMAAS LMQNPQVQQL MSGMMTNAIG ENSBTAP00000022481/1-304 REVSSPTGTG LSFDMASLIN NPAFISMAAS LMQNPQVQQL MSGMMTNAIG BACU006227/1-125 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006192/1-304 REVSSPTGTG LSFDMASLIN NPAFISMAAS LMQNPQVQQL MSGMMTNAIG 251 300 bmy_16270T0/1-192 GPAAGVGGLT DLSSLIQAGQ QFAQQIQQQN PELIEQLRNH IRSRSFSSST ENSP00000370395/1-304 GPAAGVGGLT DLSSLIQAGQ QFAQQIQQQN PELIEQLRNH IRSRSFSSSA ENSBTAP00000022481/1-304 GPAAGVGGLT DLSSLIQAGQ QFAQQIQQQN PELIEQLRNH IRSRSFSSSA BACU006227/1-125 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006192/1-304 GPAAGVGGLT DLSSLIQAGQ QFAQQIQQQN PELIEQLRNH IRSRSFSSST 301 350 bmy_16270T0/1-192 EEHS ENSP00000370395/1-304 EEHS ENSBTAP00000022481/1-304 EEHS BACU006227/1-125 ---- ENSTTRP00000006192/1-304 EEHS