KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:31 2014 Check: 00 .. Name: ENSP00000370372/1-704 Len: 714 Check: 6868 Weight: 1.00 Name: bmy_16271T0/1-553 Len: 714 Check: 2873 Weight: 1.00 Name: ENSBTAP00000022482/1-555 Len: 714 Check: 9362 Weight: 1.00 Name: BACU006226/1-704 Len: 714 Check: 4332 Weight: 1.00 Name: ENSTTRP00000001311/1-690 Len: 714 Check: 7878 Weight: 1.00 // 1 50 ENSP00000370372/1-704 ---------- MIARCLLAVR SLRRVGGSRI LLRMTLGREV MSPLQAMSSY bmy_16271T0/1-553 NTHLCVDFGP TKCLIFIFFL ILCRIGGSRI LFRMTLGKEV MSPLQAMSSY ENSBTAP00000022482/1-555 ---------- ---------- ---------- ---------- ---------- BACU006226/1-704 ---------- MIAQCFSAVR SLHRIGGSRI LFRMTLGKEV MSSLQAMSSY ENSTTRP00000001311/1-690 ---------- ---------- ----IGGSRI LFRMTLGKEV MSPLQPMSSY 51 100 ENSP00000370372/1-704 TVAGRNVLRW DLSPEQIKTR TEELIVQTKQ VYDAVGMLGI EEVTYENCLQ bmy_16271T0/1-553 TAAGRNVLRW DLSPDQIKTR TEELIAQTKQ VYDAIAMLDI EEVTYKNCLQ ENSBTAP00000022482/1-555 ---------- ---------- ---------- ---------- ---------- BACU006226/1-704 TAAGRNVLRW DLSPEQIKTR TEELVAQTKQ VYDAIAMLDI EEVTYKNCLQ ENSTTRP00000001311/1-690 TAAGRNVLRW DLSPEQIKTR TEELIAQTKQ VYDNIAMLDI EEVTYANCLQ 101 150 ENSP00000370372/1-704 ALADVEVKYI VERTMLDFPQ HVSSDKEVRA ASTEADKRLS RFDIEMSMRG bmy_16271T0/1-553 ALADVEVKYI VERTMLDFPQ HVSSDKEVRA ASTEADKRLS RFDIEMSMRE ENSBTAP00000022482/1-555 ---------- ---------- ---------- ---------- ---------- BACU006226/1-704 ALADVEVKYI VERTMLDFPQ HVSSDKEVRA ASTEADKRLS RFDIEMSMRE ENSTTRP00000001311/1-690 ALADVEVKYI VERTMLDFPQ HVSSDKEVRA ASTEADKRLS RFDIEMSMRE 151 200 ENSP00000370372/1-704 DIFERIVHLQ ETCDLGKIKP EARRYLEKSI KMGKRNGLHL PEQVQNEIKS bmy_16271T0/1-553 DIFLRIVHLK ETCDLGKIKP EARRYLEKSV KMGKRNGLHL PEQVQNEIKA ENSBTAP00000022482/1-555 ---------Q ETCDLEKIKP EARRYLEKSV KMGKRNGLHL PEQVQNEIKA BACU006226/1-704 DIFLRIVHLK ETCDLGKIKP EARRYLEKSV KMGKRNGLHL PERVQNEIKA ENSTTRP00000001311/1-690 DIFLRIVHLK ETCDLGKIKP EARRYLEKSV KMGKRNGLHL PEQVQNEIKA 201 250 ENSP00000370372/1-704 MKKRMSELCI DFNKNLNEDD TFLVFSKAEL GALPDDFIDS LEKTDDDKYK bmy_16271T0/1-553 MKKRMSELCI DFNKNLNEDD TFLEFSKAEL GALPDDFIDS LEKTDDDKYK ENSBTAP00000022482/1-555 MKKRMSELCI DFNKNLNEDD TFLVFSKAEL GALPDDFINS LEKTDGDKYK BACU006226/1-704 MKKRMSELCI DFNKNLNEDD TFLEFSKAEL GALPDDFIDS LEKTDDDKYK ENSTTRP00000001311/1-690 MKKRMSELCI DFNKNLNEDD TFLEFSKAEL GALPDDFIDS LEKTDDDKYK 251 300 ENSP00000370372/1-704 ITLKYPHYFP VMKKCCIPET RRRMEMAFNT RCKEENTIIL QQLLPLRTKV bmy_16271T0/1-553 ITLKYPHYFP VMKKCCIPET RRKMEMAFNT RCKEENTIIL HQLLPLRAKV ENSBTAP00000022482/1-555 ITLKYPHYFP VMKKCCVPET RRKMEMAFNT RCKEENTVIL QQLLPLRAEV BACU006226/1-704 ITLKYPHYFP VMKKCCIPET RRKMEMAFNT RCKEENTIIL HQLLPLRAKV ENSTTRP00000001311/1-690 ITLKYPHYFP VMKKCCIPET RRKMEMAFNT RCKEENTIIL HQLLPLRAKV 301 350 ENSP00000370372/1-704 AKLLGYSTHA DFVLEMNTAK STSRVTAFLD DLSQKLKPLG EAEREFILNL bmy_16271T0/1-553 AKLLGYSTHA DFVLEMNTAK STSHVTAFLD DLSQKLKPLG EAEREFILNL ENSBTAP00000022482/1-555 ARLLGYSTHA DFVLEMNTAK STRHVTAFLD DLSQKLKLLG EAEREFILNL BACU006226/1-704 AKLLGYSTHA DFVLEMNTAK STSHVTAFLD DLSQKLKPLG EAEREFILNL ENSTTRP00000001311/1-690 AKLLGYSTHA DFVLEMNTAK STGHVTAFLD DLSQKLKPLG EAEREFILNL 351 400 ENSP00000370372/1-704 KKKECKDRGF EYDGKINAWD LYYYMTQTEE LKYSIDQEFL KEYFPIEVVT bmy_16271T0/1-553 KKKECEERGL EYDGKINAWD LYYYMTQTEE LKYSVDQEIL KEYFPIEVVT ENSBTAP00000022482/1-555 KKKECEERGF EYDGKINAWD LHYYMTQTEE LKYSVDQETL KEYFPIEVVT BACU006226/1-704 KKKECEERGL EYDGKINAWD LYYYMTQTEE LKYSVDQEIL KEYFPIEVVT ENSTTRP00000001311/1-690 KKKECEERGL EYDGKINAWD LYYYMTQTEE LKYSVDQEIL KEYFPIEVVT 401 450 ENSP00000370372/1-704 EGLLNTYQEL LGLSFEQMTD AHVWNKSVTL YTVKDKATGE VLGQFYLDLY bmy_16271T0/1-553 EGLLNIYQEL LGLSFEQVTD AHVWHKSVTL YTVKDKATGE VLGQFYLDLY ENSBTAP00000022482/1-555 EGLLNIYQEL LGLSFEQVTD AHVWNKSVTL YTVKDKATGE VLGQFYLDLY BACU006226/1-704 EGLLNIYQEL LGLSFEQVTD AHVWHKSVTL YTVKDKATGE VLGQFYLDLY ENSTTRP00000001311/1-690 EGLLNIYQEL LGLSFEQVTD AHVWHKSVTL YTVKDKATGE VLGQFYLDLY 451 500 ENSP00000370372/1-704 PREGKYNHAA CFGLQPGCLL PDGSRMMAVA ALVVNFSQPV AGRPSLLRHD bmy_16271T0/1-553 PREGKYNHAA CFGLQPGCLL PDGSRMISVA ALVVNFSQPL AGRPSLLRHD ENSBTAP00000022482/1-555 PREGKYNHAA CFGLQPGCLL PDGSRMMSVA ALVVNFSQPL AGRPSLLRHD BACU006226/1-704 PREGKYNHAA CFGLQPGCLL PDGSRMISVA ALVVNFSQPL AGRPSLLRHD ENSTTRP00000001311/1-690 PREGKYNHAA CFGLQPGCLL PDGSRMISVA ALVVNFSQPL AGRPSLLRHD 501 550 ENSP00000370372/1-704 EVRTYFHEFG HVMHQICAQT DFARFSGTNV ETDFVEVPSQ MLENWVWDVD bmy_16271T0/1-553 EVRTYFHEFG HVMHQICAQV ---------- -SDFF----- ---------- ENSBTAP00000022482/1-555 EVRTYFHEFG HVMHQICAQT DFARFSGTNV ETDFVEVPSQ MLENWVWDAD BACU006226/1-704 EVRTYFHEFG HVMHQICAQT DFARFSGTNV ETDFVEVPSQ MLENWVWDAD ENSTTRP00000001311/1-690 EVRTYFHEFG HVMHQICAQT DFARFSGTNV ETDFVEVPSQ MLENWVWDAD 551 600 ENSP00000370372/1-704 SLRRLSKHYK DGSPIADDLL EKLVASRLVN TGLLTLRQIV LSKVDQSLHT bmy_16271T0/1-553 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022482/1-555 SLRRLSKHYR HGSPITDDLL EKLVASRLVN TGLLTLRQIV LSKVDQSLHT BACU006226/1-704 SLRRLSQHYK DGSPITDDLL EKLVASRLVN TGLLTLRQIV LSKVDQSLHT ENSTTRP00000001311/1-690 SLRRLSKHYK DGSPITDDLL EKLVASRLVN TGLLTLRQIV LSKVDQSLHT 601 650 ENSP00000370372/1-704 NTSLDAASEY AKYCSEILGV AATPGTNMPA TFGHLAGGYD GQYYGYLWSE bmy_16271T0/1-553 ---------- ---------- ---------- FYGRPTNGFS RFFF-----P ENSBTAP00000022482/1-555 NTALDAASEY AKYCTEILGV AATPGTNMPA TFGHLAGGYD GQYYGYLWSE BACU006226/1-704 NTSLDAASEY AKYCTEILGV AATPGTNMPA TFGHLAGGYD GQYYGYLWSE ENSTTRP00000001311/1-690 NTSLDAASEY AKYCTEILGV AATPGTNMPA TFGHLAGGYD GQYYGYLWSE 651 700 ENSP00000370372/1-704 VFSMDMFYSC FKKEGIMNPE VGMKYRNLIL KPGGSLDGMD MLHNFLKREP bmy_16271T0/1-553 PMSETCFLTC FLRI------ ---------- ---------- ---------- ENSBTAP00000022482/1-555 VFSMDMFYSC FKKEGIMNPE VGMKYRNLIL KPGGSLDGMD MLQNFLTREP BACU006226/1-704 VFSMDMFYSC FKEEGIMNPE VGMKYRNLIL KPGGSMDGMD MLQNFLKREP ENSTTRP00000001311/1-690 VFSMDMFYSC FKKEGIMNPE VGMKYRNLIL KPGGSMDGMD MLQNFLKREP 701 750 ENSP00000370372/1-704 NQKAFLMSRG LHAP bmy_16271T0/1-553 ---------- ---- ENSBTAP00000022482/1-555 NQKAFLMSRG LPAP BACU006226/1-704 NQKAFLMSRG LHAP ENSTTRP00000001311/1-690 NQKAFLMSRG LHAP