KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:31 2014 Check: 00 .. Name: ENSP00000228606/1-508 Len: 536 Check: 6863 Weight: 1.00 Name: ENSBTAP00000022485/1-508 Len: 536 Check: 6910 Weight: 1.00 Name: ENSTTRP00000007906/1-508 Len: 536 Check: 5216 Weight: 1.00 Name: bmy_03867T0/1-535 Len: 536 Check: 3078 Weight: 1.00 Name: BACU008166/1-508 Len: 536 Check: 5561 Weight: 1.00 // 1 50 ENSP00000228606/1-508 MTQTLKYASR VFHRVRWAPE LGASLGYREY HSARRSLADI PGPSTPSFLA ENSBTAP00000022485/1-508 MTQTLKFASR VFHRVRC-PE LGASLGSRGS ESAPRVLADI PGPSTPGFLA ENSTTRP00000007906/1-508 MTQTLKLASR VFHRVRCPPE LGASLGSRGS DSAPRGLADI PGPSTPGFLA bmy_03867T0/1-535 MTQTLKLASR VFHRVRCSPE LGASLGSRGS DSAPRGLADI PGPSTPGFLA BACU008166/1-508 MTQTLKLASR VFHRVRCPPE LGASLGSRGS DSAPRGLADI PGPSTPGFLA 51 100 ENSP00000228606/1-508 ELFCKGGLSR LHELQVQGAA HFGPVWLASF GTVRTVYVAA PALVEELLRQ ENSBTAP00000022485/1-508 ELFCKGGLSR LHELQVQGAA RFGPVWLASF GTVRTVYLAA PTLVEQLLRQ ENSTTRP00000007906/1-508 ELFCKGGLSR LHELQVQGAA RFGPVWLASF GTVRTVYVAT PTLVEQLLRQ bmy_03867T0/1-535 ELFCKGGLSR LHELQVQGAT CFGPVWLASF GTVRTVYVAT PTLIEQLLRQ BACU008166/1-508 ELFCKGGLSR LHELQVQGAA RFGPVWLASF GTVRTVYVAT PTLVEQLLRQ 101 150 ENSP00000228606/1-508 EGPRPERCSF SPWTEHRRCR QRACGLLTAE GEEWQRLRSL LAPLLLRPQA ENSBTAP00000022485/1-508 EGPRPERCSF SPWTEHRRRR QRACGLLTAE GEEWQRLRSL LAPLLLRPQA ENSTTRP00000007906/1-508 EGPRPERCSF SPWAEHRRRR QRACGLLTAE GEEWQRLRSL LAPLLLRPQA bmy_03867T0/1-535 EGPRPERCSF SPWAEHRRRC QRACGLLTAE GEEWQRLRSL LAPLLLRPQA BACU008166/1-508 EGPRPERCSF SPWAEHRRRR QRACGLLTAE GEEWQRLRSL LAPLLLRPQA 151 200 ENSP00000228606/1-508 AARYAGTLNN VVCDLVRRLR RQRGRGTGPP ALVRDVAGEF YKFGLE---- ENSBTAP00000022485/1-508 AARYAGTLHG VVRDLVRRLR RQRGLGAGPP SLVRDVAGEF YKFGLE---- ENSTTRP00000007906/1-508 AARYAGTLHD VVGDLVRRLR RQRGLGAGPP ALVRDVAGEF YKFGLE---- bmy_03867T0/1-535 AARYAGTLHN VVGDLVRRLR RQRGLGAGPP ALVRDVAGEF YKFGLEGESL BACU008166/1-508 AARYAGTLHD VVGDLVRRLR RQRGLGAGPP ALVRDVAGEF YKFGLE---- 201 250 ENSP00000228606/1-508 ---------- ---------- ---GIAAVLL GSRLGCLEAQ VPPDTETFIR ENSBTAP00000022485/1-508 ---------- ---------- ---GIAAVLL GSRLGCLEAE VPPDTETFIR ENSTTRP00000007906/1-508 ---------- ---------- ---GIAAVLL GSRLGCLEAE VPPDTETFIR bmy_03867T0/1-535 DRGKCRRHLV RVSRCPDSAP SRPGIAAVLL GSRLGCLEAE VPPDTETFIR BACU008166/1-508 ---------- ---------- ---GIAAVLL GSRLGCLEAE VPPDTETFIR 251 300 ENSP00000228606/1-508 AVGSVFVSTL LTMAMPHWLR HLVPGPWGRL CRDWDQMFAF AQRHVERREA ENSBTAP00000022485/1-508 AVGSVFVSTL LTMAMPSWLH RVVPGPWDRL CRDWDQMFAF AQQHVEQREA ENSTTRP00000007906/1-508 AVRSVFVSTL LTMAMPGWLH RLVPGPWDRL CRDWDQMFAF AQQHVERREA bmy_03867T0/1-535 AVRSVFVSTL LTMAMPSWLH RLVPGPWGRL CRDWDQMFAF AQQHVERREA BACU008166/1-508 AVRSVFVSTL LTMAMPSWLH RLVPGPWGRL CRDWDQMFAF AQQHVERREA 301 350 ENSP00000228606/1-508 EAAMRNGG-Q PEKDLESGAH LTHFLFREEL PAQSILGNVT ELLLAGVDTV ENSBTAP00000022485/1-508 EVAMRNQSEK SEEDMGPGAH LTYFLLQKEL PAASILGNVT ELLLAGVDTV ENSTTRP00000007906/1-508 EVAMRSQG-K SEGDTGFGAH LTYFLFREEL PAPSILGNVT ELLLAGVDTV bmy_03867T0/1-535 EVAMRSQG-K SEEDTGFGAH LTYFLFREEL PAPSILGNVT ELLLAGVDTV BACU008166/1-508 EVAMRSQG-K SEEDTGFAAH LTYFLFREEL PAPSILGNVT ELLLAGVDTV 351 400 ENSP00000228606/1-508 SNTLSWALYE LSRHPEVQTA LHSEITAALS PGSSAYPSAT VLSQLPLLKA ENSBTAP00000022485/1-508 SNTLSWALYE LSRHPEIQTA LHAEITAALG PGSSTQPSAT ALSQLPLLKA ENSTTRP00000007906/1-508 SNTLSWALYE LSRHPEVQTA LRSEITAALG PGSSAHPSAT ALSQMPLLKA bmy_03867T0/1-535 SNTLSWALYE LSRHPEVQTA LRSEITAALG PGSSAHPSAT ALSQVPLLKA BACU008166/1-508 SNTLSWALYE LSRHPEVQTA LRSEITAALG PGSSAHPSAT ALSQVPLLKA 401 450 ENSP00000228606/1-508 VVKEVLRLYP VVPGNSRVPD KDIHVGDYII PKNTLVTLCH YATSRDPAQF ENSBTAP00000022485/1-508 VVKEVLRLYP VVPGNSRVPD RDICVGEYII PKNTLVTLCH YATSRDPAQF ENSTTRP00000007906/1-508 VIKEVLRLYP VVPGNSRVPD KDICVGEYII PKNTLVTLCH YATSRDPAQF bmy_03867T0/1-535 VIREVLRLYP VVPGNSRVPD KDICVGDYII PKNTLVTLCH YATSRDPAQF BACU008166/1-508 VIREVLRLYP VVPGNSRVPD KDICVGDYII PKNTLVTLCH YATSRDPAQF 451 500 ENSP00000228606/1-508 PEPNSFRPAR WLGEGPTPHP FASLPFGFGK RSCMGRRLAE LELQMALAQI ENSBTAP00000022485/1-508 PEPNSFRPAR WLGEGPAPHP FASLPFGFGK RSCVGRRLAE LELQMALAQI ENSTTRP00000007906/1-508 PEPNSFRPAR WLGDGPASHP FASLPFGFGK RSCMGRRLAE LELQMALAQI bmy_03867T0/1-535 PEPNSFRPAR WLGDGPAPHP FASLPFGFGK RSCMGRRLAE LELQMALAQI BACU008166/1-508 PEPNSFRPAR WLGDGPAPHP FASLPFGFGK RSCMGRRLAE LELQMALAQI 501 550 ENSP00000228606/1-508 LTHFEVQPEP GAAPVRPKTR TVLVPERSIN LQFLDR ENSBTAP00000022485/1-508 LIHFEVQPEP GSAPVRPMTR TVLVPERSIN LQFVDR ENSTTRP00000007906/1-508 LIHFEVQPEP GAAPVRPMTR TVLVPERSIN LQFVDR bmy_03867T0/1-535 LIHFEVQPEP GAAPVRPMTR TVLVPERSIN LQFVDR BACU008166/1-508 LIHFEVQPEP GAAPVRPMTR TVLVPERSIN LQFVDR