KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:17:32 2014 Check: 00 .. Name: ENSBTAP00000022486/1-1245 Len: 1253 Check: 901 Weight: 1.00 Name: ENSP00000435310/1-698 Len: 1253 Check: 4274 Weight: 1.00 Name: bmy_16613T0/1-775 Len: 1253 Check: 4122 Weight: 1.00 Name: BACU000362/1-1245 Len: 1253 Check: 3574 Weight: 1.00 // 1 50 ENSBTAP00000022486/1-1245 MSTVVAQSLH VFGLRSHVSN NVFFFDEQII MFPSGNHCVK YNVDQKWQKF ENSP00000435310/1-698 MSAVVAQTLH VFGLRSHVAN NIFYFDEQII IFPSGNHCVK YNVDQKWQKF bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 MSTVVAQSLH VFGLRSHVSN NVFFFDEQII IFPSGNHCVK YNVDQKWQKF 51 100 ENSBTAP00000022486/1-1245 IPGSDKSQGT LALAISPNRR YLAVSETVQD KPVITIYELS AIPCRKRKIL ENSP00000435310/1-698 IPGSEKSQGM LALSISPNRR YLAISETVQE KPAITIYELS SIPCRKRKVL bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 IPGSDKSQGM LALSISPNRR YLAISETVQE KPVITIYELS TVPCRKRKVL 101 150 ENSBTAP00000022486/1-1245 NNFDFPVQKF ICMAFSPDSK YLLTQTSPPE SNLVYWLWEK QKVMAIVRID ENSP00000435310/1-698 NNFDFQVQKF ISMAFSPDSK YLLAQTSPPE SNLVYWLWEK QKVMAIVRID bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 NNFDFPVQKF ICMAFSPDSK YLLTQTSPPE SNLVYWLWEK QKVMAIVRTD 151 200 ENSBTAP00000022486/1-1245 TQNNAVFQVS FNPQDNTQIC ITGNGMFKLL RFAEGTLKQT NFQRGEPQNY ENSP00000435310/1-698 TQNNPVYQVS FSPQDNTQVC VTGNGMFKLL RFAEGTLKQT SFQRGEPQNY bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 TQNNAVYQVS FNPQDNTQIC VTGNGMFKLL RFAEGTLKQT NFQRGEPQNY 201 250 ENSBTAP00000022486/1-1245 LAHTWVSDDK IIAGTDTGRL FLFESGDQRW ETSIVVKEPT SETKNLGVIQ ENSP00000435310/1-698 LAHTWVADDK IVVGTDTGKL FLFESGDQRW ETSIMVKEPT NGSKSLDVIQ bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 LAHTWVSDDK IVVGTATGRL YLFESGDQRW ETSIMVREPT SETKNLGVIQ 251 300 ENSBTAP00000022486/1-1245 ESESLIEFPA VTSPVPSYEQ VMMTSSHSQL SLPQVFAIAA YSKGFACSAG ENSP00000435310/1-698 ESESLIEFPP VSSPLPSYEQ MVAASSHSQM SMPQVFAIAA YSKGFACSAG bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 ESESLIEFPT ITSPAPSYEQ VVMAGSHHQL SLPQVSAIAA YSKGFACSAG 301 350 ENSBTAP00000022486/1-1245 PGRVLLFEKM EDKEFYRESR EIRIPVDPQS NDPSQSDKQD VLCMCFSPSE ENSP00000435310/1-698 PGRVLLFEKM EEKDFYRESR EIRIPVDPQS NDPSQSDKQD VLCLCFSPSE bmy_16613T0/1-775 ---------- ---------- ---------- ---------- ---------- BACU000362/1-1245 PGRVLLFEKM EEKEFYRESR EIRIPVDTQS NDPSQSDKQD VLCLCFSPSE 351 400 ENSBTAP00000022486/1-1245 ETLIASTSKN QLYSITMSLT EISKGEPAHF EYLMYPLHSA SITGLDTCIR ENSP00000435310/1-698 ETLVASTSKN QLYSITMSLT EISKGEPAHF EYLMYPLHSA PITGLATCIR bmy_16613T0/1-775 ---------- ---------- ---------- ---MYPLHSA SITGLATCIR BACU000362/1-1245 ETLIASTSKN QLYSITMSLT EISKGETAHF EYLMYPLHSA SITGLATCIR 401 450 ENSBTAP00000022486/1-1245 KPLIATCSVD RSVRIWNYES NSLELFKEYQ EEAYTISLHP SGHYIVVGFA ENSP00000435310/1-698 KPLIATCSLD RSIRLWNYET NTLELFKEYQ EEAYSISLHP SGHFIVVGFA bmy_16613T0/1-775 KPLIATCSVD RSVRIWNYES NTLELFKEYQ EEAYTISLHP SGHYIVVGFA BACU000362/1-1245 KPLIATCSVD RSVRIWNYES NTLELFKEYQ EEAYTISLHP SGHYIVVGFA 451 500 ENSBTAP00000022486/1-1245 DKLRIMNLLI DDIRSFKEYS VRGCKECSFS NGGHLFAAVN GNVIHIFSTT ENSP00000435310/1-698 DKLRLMNLLI DDIRSFKEYS VRGCGECSFS NGGHLFAAVN GNVIHVYTTT bmy_16613T0/1-775 DKLRLMNLLI DDIRSFKEYS VRGCKECCFS NGGHLFAAVN GN-------- BACU000362/1-1245 DKLRLMNLLI DDIRSFKEYS VRGCKECCFS NGGHLFAAVN GNVIHIFSTT 501 550 ENSBTAP00000022486/1-1245 SLENISNLKG HTGKIRSVAW NTDDSKLISC GTDGAVYEWS LSTGKRETEC ENSP00000435310/1-698 SLENISSLKG HTGKIRSIVW NADDSKLISG GTDGAVYEWN LSTGKRETEC bmy_16613T0/1-775 ---------- ----IRSVAW NTDDSKLISC GTDGAVYEWN LSTGKRETEC BACU000362/1-1245 SLENVSNLKG HTGKV--IAW NTDDSKLISC GTDGAVYEWN LSTGKRETEC 551 600 ENSBTAP00000022486/1-1245 VLKSCSYNCV TISPDGKIIF AVGSDQTLKE IADSSVIREM SAFDVTYTAV ENSP00000435310/1-698 VLKSCSYNCV TVSPDAKIIF AVGSDHTLKE IADSLILREI SAFDVTYTAI bmy_16613T0/1-775 VLKSCSYNCV TISPDGKIIF AVGSDQTLKE IADSSVLREM SAFDVTYTAI BACU000362/1-1245 VLKSCSYNCV TISPDGKIIF AVGSDQTLKE IADSSVLREM SAFDVTYTAI 601 650 ENSBTAP00000022486/1-1245 VISHSGRMMF VGTSVGTIRA MKYPLPLQKE FNEYQAHAGP VTKMSLTFDD ENSP00000435310/1-698 VISHSGRMMF VGTSVGTIRA MKYPLPLQKE FNEYQAHAGP ITKVS----- bmy_16613T0/1-775 VISHSGRMMF VGTSVGTIRA MKYPLPLQKE FNEYQAHCGP ITKMSLTFDD BACU000362/1-1245 VISHSGRMMF VGTSVGTIRA MKYPLPLQKE FNEYQAHCGP ITKMSLTF-- 651 700 ENSBTAP00000022486/1-1245 QFLLSVAEDG CLFTWKVFDK DGRGIKRERE VGFAEEVLVT KTDMEEKAQV ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 QFLLSVAEDG CLFTWKVFDK DGRGIKRERE VGFAEEVLVT KTDMEEKVQV BACU000362/1-1245 -XXLSVAEDG CLFTWKVFDK DGRGIKRERE VGFAEEVLVT KTDMEEKVQV 701 750 ENSBTAP00000022486/1-1245 MLELKTRVEE LKMENEYQLR LKDMNYSEKI KELTDKFLQE MESLKTKNQV ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 MLELKTRVEE LKMENEYQLR LKDMNYSEKV KELTDRFLQE MESLKTKNQV BACU000362/1-1245 MLELKTRVEE LKMENEYQLR LKDMNYSEKV KELTDRFLQE MESLKTKNQV 751 800 ENSBTAP00000022486/1-1245 LKTEKEKQDV LHRERMDDLL DKQSRELQDL ECCNNQKLLL EYEKYQELQL ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 LRTEKEKQDA LHREHMDDLL EKQSRELQDL ECCNNQKLLL EYEKYQELQL BACU000362/1-1245 LRTEKEKQDA LHRERMDDLL EKQSRELQDL ECCNNQKLLL EYEKYQELQL 801 850 ENSBTAP00000022486/1-1245 KSQRMQEEYE KQLRDNDETK SQALEELTEF YEAKLQEKTT LLEEAQEDVR ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 KSQRMQEEYE KQLRDNEETK SQALEELTEF YEAKLQEKTT LLEEAQEDVR BACU000362/1-1245 KSQRMQEEYE KQLRDNEETK SQALEELTEF YEAKLQEKTT LLEEAQEDVR 851 900 ENSBTAP00000022486/1-1245 QQLREFEETK KQIEEDEDRE IQDIKTKYEK KLRDEKESNL RLKGETGIMR ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 QQLREFEETK KQIEEDEDRE IQDIKTKYEK KLRDEKESNL RLKGETGIMR BACU000362/1-1245 HQLREFEETK KQIEEDEDRE IQDIKTKYEK KLRDEKESNL RLKGETGIMR 901 950 ENSBTAP00000022486/1-1245 KKFSSLQKEI EERTNDIELL KGEQVKLQGV IKSLEKDIMG LKREIQERDE ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 KKFSSLQKEI EERTNDIEIL KGEQ------ ---------- ---------- BACU000362/1-1245 KKFSSLQKEI EERTNDIEIL KGEQVKLQGV IKSLEKDILG LKREIQERDE 951 1000 ENSBTAP00000022486/1-1245 TIQDKEKRIY DLKKKNQELE KFKFVLDYKI KELKKQIEPR ENEIKVMKEQ ENSP00000435310/1-698 ---------- ---------- ---------- ----RALSP- ---------- bmy_16613T0/1-775 -----EKRIY DLKKKNQELE KFKFVLDYKI KELKKQIEPR ENEIKVMKEQ BACU000362/1-1245 TIQDKEKRIY DLKKKNQELE KFKFVLDYKI KELKKQIEPR ENEIKVMKEQ 1001 1050 ENSBTAP00000022486/1-1245 IQEEVKANLS NNRNASKRIA SFSFENKTLL SCTFQELFNR RMRESQESSI ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 IQ-E------ ---------- ---------- ---------- ---ERDLEAL BACU000362/1-1245 IQ-EMETELE HFHKQNTQLE LNITELWQKL RATDQEMHRE RQKERDLEAL 1051 1100 ENSBTAP00000022486/1-1245 YKELKKMLHQ TVERIHVGKK YGDIPRGIF- --VVRGENVV LLG-EIDLEK ENSP00000435310/1-698 ----GTQSHT CL-------- ----LRALF- --IPSTSQCL F--------- bmy_16613T0/1-775 VKRFKTDLHN CVAYIQEPRQ LKEKVRALFE KYVQRADMVE ITGLNSDLQQ BACU000362/1-1245 VKRFKTDLHN CVAYLQEPRQ LKEKVRALFE KYVQRADMVE ITGLNSDLQQ 1101 1150 ENSBTAP00000022486/1-1245 ESDTPLQQVS TEEILEEQRV EQKTKLEGKT RNEQMMMANL KLL--INELL ENSP00000435310/1-698 ---------- -SLLLLSYLF IHHSLNH--- ---HLLTMNI LFV------- bmy_16613T0/1-775 EYTRQREHLE RSLATLKKKV VKESELH-RA DYVRIMQENV SLIKEINELR BACU000362/1-1245 EYTRQREHLE RSLATLKKKV VKESELH-RA DYVRIMQENV SLIKEINELR 1151 1200 ENSBTAP00000022486/1-1245 RSLSFTSSAS FNKLGSRLKT ARQSKVKQEL ETVSSEDLPS VPPTMRLNVQ ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 RELKFTRSQV YG-LEAALKL TKKIQPQDVP ETESGKDLPG MPPTVRLNEQ BACU000362/1-1245 RELKFTRSQV YD-LEAALKL TKKIQPQDVP ETESGKDLPG MPPTVRLNEQ 1201 1250 ENSBTAP00000022486/1-1245 EETGRIIEMQ RLEIQRLRDQ IQEQEQVPGF HPLAGMQLPS LSG--EDLKA ENSP00000435310/1-698 ---------- ---------- ---------- ---------- ---------- bmy_16613T0/1-775 EETGRIIEMQ RLEIQRLRDQ IQEQEQVPGF HPFAGMRLPS LLGAEADLKL BACU000362/1-1245 EETGRIIEMQ RLEIQRLRDQ IQEQEQVPGF HPFAGMRLPS LLGAEADLKL 1251 1300 ENSBTAP00000022486/1-1245 QTK ENSP00000435310/1-698 --- bmy_16613T0/1-775 QTK BACU000362/1-1245 QTK