KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:33 2014 Check: 00 .. Name: ENSP00000314441/1-276 Len: 303 Check: 6371 Weight: 1.00 Name: ENSBTAP00000022487/1-277 Len: 303 Check: 8746 Weight: 1.00 Name: ENSTTRP00000016578/1-302 Len: 303 Check: 7750 Weight: 1.00 Name: bmy_03866T0/1-232 Len: 303 Check: 963 Weight: 1.00 Name: BACU008167/1-266 Len: 303 Check: 9277 Weight: 1.00 // 1 50 ENSP00000314441/1-276 ---------- ---------- ------MAAE TRN-VAGAEA PPPQKRYYRQ ENSBTAP00000022487/1-277 ---------- ---------- -----MAGTE TGD-AAGTEA PQPQKRYYRQ ENSTTRP00000016578/1-302 LSASFSCALS LGLHVGSVDK PGLGIMAGTE TGDAAAGAEA PQPQKRYYRQ bmy_03866T0/1-232 ---------- ---------- -----MAGTE TGDAAAGAEA PQPQKRYYRQ BACU008167/1-266 ---------- ---------- -----MAGTE TGDAAAGAEA PQPQKRYYRQ 51 100 ENSP00000314441/1-276 RAHSNPMADH TLRYPVKPEE MDWSELYPEF FAPLTQNQSH DDPKDKKEKR ENSBTAP00000022487/1-277 RAHSNPMADH TLRYPVKPED MDWSELYPEF FAPLPQNQSH DDPKDKKEKR ENSTTRP00000016578/1-302 RAHSNPMADH TLRYPVKPED MDWSELYPEF FAPLTQNQSH DDPKDKKEKR bmy_03866T0/1-232 RAHSNPMADH TLRYPVKPED MDWSELYPEF FAPLTQNQSH DDPKDKKEKR BACU008167/1-266 RAHSNPMADH TLRYPVKPED MDWSELYPEF FAPLTQNQSH DDPKDKKEKR 101 150 ENSP00000314441/1-276 AQAQVEFADI GCGYGGLLVE LSPLFPDTLI LGLEIRVKVS DYVQDRIRAL ENSBTAP00000022487/1-277 AQAQVEFADI GCGYGGLLVE LSPLFPDTLI LGLEIRVKVS DYVQDRIRAL ENSTTRP00000016578/1-302 AEAQVEFADI GCGYGGLLVE LSPLFPDTLI LGLEIRVKVS DYVQDRIRAL bmy_03866T0/1-232 AEAQVEFADI GCGYGGLLVE LSPLFPDTLI LGLEIRVKVS DYVQDRIRAL BACU008167/1-266 AEAQVEFADI GCGYGGLLVE LSPLFPDTLI LGLEIRVKVS DYVQDRIRAL 151 200 ENSP00000314441/1-276 RAAPAGGFQN IACLRSNAMK HLPNFFYKGQ LTKMFFLFPD PHFKRTKHKW ENSBTAP00000022487/1-277 RAAPGGGFQN IACLRSNAMK HLPNFFHKGQ LTKMFFLFPD PHFKRTKHKW ENSTTRP00000016578/1-302 RAAPGGGFQN IACLRSNAMK HLPNFFRKGQ LTKMFFLFPD PHFKRTKHKW bmy_03866T0/1-232 RAAPGGGFQN IACLRSNAMK HLPNFFRKGQ LTKMFFLFPD PHFKRTKHKW BACU008167/1-266 RAAPGGGFQN IACLRSNAMK HLPNFFRKGQ LTKMFFLFPD PHFKRTKHKW 201 250 ENSP00000314441/1-276 RIISPTLLAE YAYVLRVGGL VYTITDVLEL HDWMCTHFEE HPLFERVPLE ENSBTAP00000022487/1-277 RIISPTLLAE YAYVLRVGGL VYTITDVLEL HEWMCTHFEG HPLFERVPLE ENSTTRP00000016578/1-302 RIISPTLLAE YAYVLRVGGL VYTITDVLEL HDWMCTHFEG HPLFERVPLE bmy_03866T0/1-232 RIISPTLLAE YAYVLRLG-- ---------- ---------- ---------- BACU008167/1-266 RIISPTLLAE YAYVLRVGGL VYTITDVLEL HDWMCTHFEG HPLFERVPLE 251 300 ENSP00000314441/1-276 DLSEDPVVGH LGTSTEEGKK VLRNGGKNFP AIFRRIQDPV LQAVTSQTSL ENSBTAP00000022487/1-277 ELSEDPIVGH LGTSTEEGKK VLRNGGKNFP AIFRRIQDPA LPAVTPTPTP ENSTTRP00000016578/1-302 ELSEDPIVGH LGTSTEEGKK VLRNGGKNFP AIFRRIQDPT F-AVTPNPTL bmy_03866T0/1-232 --SEDPIVGH LGTSTEEGKK VLRNGGKNFP AIFRRIQDPT L--------- BACU008167/1-266 ELSEDPIVGH LGTSTEEGKK VLRNGGKNFP AIFRRIQDPT L--------- 301 350 ENSP00000314441/1-276 PGH ENSBTAP00000022487/1-277 PGH ENSTTRP00000016578/1-302 PDH bmy_03866T0/1-232 --- BACU008167/1-266 ---