KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:37 2014 Check: 00 .. Name: BACU005373/1-410 Len: 419 Check: 2717 Weight: 1.00 Name: ENSP00000265471/1-335 Len: 419 Check: 1059 Weight: 1.00 Name: ENSBTAP00000022546/1-335 Len: 419 Check: 274 Weight: 1.00 Name: bmy_19284T0/1-323 Len: 419 Check: 972 Weight: 1.00 Name: ENSTTRP00000002309/1-335 Len: 419 Check: 2248 Weight: 1.00 // 1 50 BACU005373/1-410 ---------M ALWDAERTVV LCPHPCFPGP GQPCDCLSPL RAAAEQLRQK ENSP00000265471/1-335 MKLKLKNVFL AYFLVSIAGL LY---ALVQL GQPCDCLPPL RAAAEQLRQK ENSBTAP00000022546/1-335 MKLKLKNVFL AYFLVSIAGL LY---ALVQL GQPCDCLPPL RAAAEQLRQK bmy_19284T0/1-323 MKLKLKNVFL AYFLVSIAVL LY---ALVQL ---------- --AAEQLRQK ENSTTRP00000002309/1-335 MKLKLKNVFL AYFLVSIAGL LY---ALVQL GQPCDCLSPL RAAAEQLRQK 51 100 BACU005373/1-410 DLRISQLQAD LRRPPPAPAQ PPEPEALPTI YVVTPTYARL VQKAELVRLS ENSP00000265471/1-335 DLRISQLQAE LRRPPPAPAQ PPEPEALPTI YVVTPTYARL VQKAELVRLS ENSBTAP00000022546/1-335 DLRISQLQAD LRRPPPAPAQ PPEPEALPTI YVVTPTYARL VQKAELVRLS bmy_19284T0/1-323 DLRISQLQAD LRRPPPAPAQ PPEPEALPTI YVVTPTYARL VQKAELVRLS ENSTTRP00000002309/1-335 DLRISQLQAD LRRPPPAPAQ PPEPEALPTI YVVTPTYARL VQKAELVRLS 101 150 BACU005373/1-410 QTLSLVPRLH WLLVEDAEGP TPLVSGLLAA SGLLFTHLAV LTPKAQRLRE ENSP00000265471/1-335 QTLSLVPRL- ---------- ---------- ---------- ---------- ENSBTAP00000022546/1-335 QTLSLVPRL- ---------- ---------- ---------- ---------- bmy_19284T0/1-323 QTLSLVPRL- ---------- ---------- ---------- ---------- ENSTTRP00000002309/1-335 QTLSLVPRL- ---------- ---------- ---------- ---------- 151 200 BACU005373/1-410 GEPGWVRPRG VEQRNRALDW LVQKAELVRL SQTLSLVPRL HWLLVEDAEG ENSP00000265471/1-335 ---------- ---------- ---------- ---------- HWLLVEDAEG ENSBTAP00000022546/1-335 ---------- ---------- ---------- ---------- HWLLVEDAEG bmy_19284T0/1-323 ---------- ---------- ---------- ---------- HWLLVEDAEG ENSTTRP00000002309/1-335 ---------- ---------- ---------- ---------- HWLLVEDAEG 201 250 BACU005373/1-410 PTPLVSGLLA ASGLLFTHLA VLTPKAQRLR EGEPGWVRPR GVEQRNRALD ENSP00000265471/1-335 PTPLVSGLLA ASGLLFTHLV VLTPKAQRLR EGEPGWVHPR GVEQRNKALD ENSBTAP00000022546/1-335 PTPLVSGLLA ASGLLFTHLA VLTPKAQRLR EGEPGWVRPR GVEQRNRALD bmy_19284T0/1-323 PTPLVSGLLA ASGLLFTHLA VLTPKAQRLR EGEPGWVRPR GVEQRNRALD ENSTTRP00000002309/1-335 PTPLVSGLLA ASGLLFTHLA VLTPKAQRLR EGEPGWVRPR GVEQRNRALD 251 300 BACU005373/1-410 WLRSRGGAVA GERDPPPPGT RGVVYFADDD NTYSRELFEE MRWTRGVSVW ENSP00000265471/1-335 WLRGRGGAVG GEKDPPPPGT QGVVYFADDD NTYSRELFEE MRWTRGVSVW ENSBTAP00000022546/1-335 WLRSGGGAVG GEKDPPPPGT QGVVYFADDD NTYSRELFEE MRWTRGVSVW bmy_19284T0/1-323 WLRSRGGAVA GEKDPPTPGT RGVVYFADDD NTYSRELFEE MRWTRGVSVW ENSTTRP00000002309/1-335 WLRSRGGAVA GEKDPPPPGT RGVVYFADDD NTYSRELFEE MRWTRGVSVW 301 350 BACU005373/1-410 PVGLVGGLRF EGPRVQDGRV VGFHTAWEPN RPFPVDMAGF AVSLPLLLAK ENSP00000265471/1-335 PVGLVGGLRF EGPQVQDGRV VGFHTAWEPS RPFPVDMAGF AVALPLLLDK ENSBTAP00000022546/1-335 PVGLVGGLRF EGPRVQDGRV VGFHTAWEPN RPFPVDMAGF AIALSLLLAK bmy_19284T0/1-323 PVGLVGGLRF EGPRVQDGRV VGFHTAWEPN RPFPVDMAGF AVSLPLLLAK ENSTTRP00000002309/1-335 PVGLVGGLRF EGPRVQDGRV VGFHTAWEPN RPFPLDMAGF AVSLPLLLAK 351 400 BACU005373/1-410 PNARFDATAP RGHLESSLLS HLVDPKDLEP RAANCTRVLV WHTRTEKPKM ENSP00000265471/1-335 PNAQFDSTAP RGHLESSLLS HLVDPKDLEP RAANCTRVLV WHTRTEKPKM ENSBTAP00000022546/1-335 PNARFDATAP RGHLESSLLS HLVDPKDLEP RAANCTRVLV WHTRTEKPKM bmy_19284T0/1-323 PNARFDATAP RGHLESSLLS HLVDPKDLEP RAANCTRVLV WHTRTEKPKM ENSTTRP00000002309/1-335 PNARFDATAP RGHLESSLLS HLVDPKDLEP RAANCTRVLV WHTRTEKPKT 401 450 BACU005373/1-410 KQEEQLQRQG RGSDPAVEV ENSP00000265471/1-335 KQEEQLQRQG RGSDPAIEV ENSBTAP00000022546/1-335 KQEEQLQRQG HGSDPAVEV bmy_19284T0/1-323 KQEEQLQRQG RGSDPAVEV ENSTTRP00000002309/1-335 KQEEQLQRQG RGSDPAVEV