KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:38 2014 Check: 00 .. Name: bmy_14982T0/1-309 Len: 505 Check: 9283 Weight: 1.00 Name: ENSTTRP00000009132/1-492 Len: 505 Check: 8844 Weight: 1.00 Name: ENSP00000338165/1-492 Len: 505 Check: 242 Weight: 1.00 Name: BACU003298/1-505 Len: 505 Check: 8431 Weight: 1.00 Name: ENSBTAP00000022547/1-492 Len: 505 Check: 9673 Weight: 1.00 // 1 50 bmy_14982T0/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009132/1-492 ---------- ---MGGRRGP NRTSYCRNPL CEPGSSGGSG GGHTSSASVT ENSP00000338165/1-492 ---------- ---MGGRRGP NRTSYCRNPL CEPGSSGGSS GSHTSSASVT BACU003298/1-505 MPSGLRIYLV SSPTGGRRGP NRTSYCRNPL CEPGSSGGSG GGHTSSASVT ENSBTAP00000022547/1-492 ---------- ---MGGRRGP NRTSYCRNPL CEPGSSGGSG GGHTSSASVT 51 100 bmy_14982T0/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009132/1-492 SVRSRTRSSS GTGLSSPPLA TQTVVPLQHC KIPELPVQAS ILFELQLFFC ENSP00000338165/1-492 SVRSRTRSSS GTGLSSPPLA TQTVVPLQHC KIPELPVQAS ILFELQLFFC BACU003298/1-505 SVRSRTRSSS GTGLSSPPLA TQTVVPLQHC KIPELPVQAS ILFELQLFFC ENSBTAP00000022547/1-492 SVRSRTRSSS GTGLSSPPLA TQTVVPLQHC KIPELPVQAS ILFELQLFFC 101 150 bmy_14982T0/1-309 ---------- ---------- ---------- ---------- MVTTIVLGRR ENSTTRP00000009132/1-492 QLIALFVHYI NIYKTVWWYP PSHPPSHTSL NFHLIDFNLL MVTTIVLGRR ENSP00000338165/1-492 QLIALFVHYI NIYKTVWWYP PSHPPSHTSL NFHLIDFNLL MVTTIVLGRR BACU003298/1-505 QLIALFVHYI NIYKTVWWYP PSHPPSHTSL NFHLIDFNLL MVTTIVLGRR ENSBTAP00000022547/1-492 QLIALFVHYI NIYKTVWWYP PSHPPSHTSL NFHLIDFNLL MVTTIVLGRR 151 200 bmy_14982T0/1-309 FIGSIVKEAS QRGKVSLFRS IMLFLTRFTV LTATGWSLCR SLIHLFRTYS ENSTTRP00000009132/1-492 FIGSIVKEAS QRGKVSLFRS IMLFLTRFTV LTATGWSLCR SLIHLFRTYS ENSP00000338165/1-492 FIGSIVKEAS QRGKVSLFRS ILLFLTRFTV LTATGWSLCR SLIHLFRTYS BACU003298/1-505 FIGSIVKEAS QRGKVSLFRS IMLFLTRFTV LTATGWSLCR SLIHLFRTYS ENSBTAP00000022547/1-492 FIGSIVKEAS QRGKVTLFRS ILLFLTRFTV LTATGWSLCR SLIHLFRTYS 201 250 bmy_14982T0/1-309 FLNLLFLCYP FGMYIPFLQL NCDLRKTNLF SHMASMGPRE AVSGLARSRD ENSTTRP00000009132/1-492 FLNLLFLCYP FGMYIPFLQL NCDLRKTNLF SHMASMGPRE AVSGLARSRD ENSP00000338165/1-492 FLNLLFLCYP FGMYIPFLQL NCDLRKTSLF NHMASMGPRE AVSGLAKSRD BACU003298/1-505 FLNLLFLCYP FGMYIPFLQL NCDLRKTNLF SHMASMGPRE AVSGLARSRD ENSBTAP00000022547/1-492 FLNLLFLCYP FGMYIPFLQL NCDLRKTNLF SHVASMGPRE AVSGLARSRD 251 300 bmy_14982T0/1-309 YLLTLRETWK QHTRQLYGPD AMPTHACCLS PSLIRSEVEF LKMDFNWRMK ENSTTRP00000009132/1-492 YLLTLRETWK QHTRQLYGPD AMPTHACCLS PSLIRSEVEF LKMDFNWRMK ENSP00000338165/1-492 YLLTLRETWK QHTRQLYGPD AMPTHACCLS PSLIRSEVEF LKMDFNWRMK BACU003298/1-505 YLLTLRETWK QHTRQLYGPD AMPTHACCLS PSLIRSEVEF LKMDFNWRMK ENSBTAP00000022547/1-492 YLLTLRETWK QHTKQLYGPD AMPTHACCLS PSLIRSEVEF LKMDFNWRMK 301 350 bmy_14982T0/1-309 EVLVSSMLSA YYVAFVPVWF VKNTHYYDKR WSCELFLLVS ISTSVILMQH ENSTTRP00000009132/1-492 EVLVSSMLSA YYVAFVPVWF VKXXXXXXXX XXXXXXXXXX XXXXXXXMQH ENSP00000338165/1-492 EVLVSSMLSA YYVAFVPVWF VKNTHYYDKR WSCELFLLVS ISTSVILMQH BACU003298/1-505 EVLVSSMLSA YYVAFVPVWF VKNTHYYDKR WSCELFLLVS ISTSVILMQH ENSBTAP00000022547/1-492 EVLVSAMLSA YYVAFVPVWF VKNTHYYDKR WSCELFLLVS ISTSVILMQH 351 400 bmy_14982T0/1-309 LLPASYCDLL HKAAAHLGCW QKVDPALCSN VLQHPWTEEC MWPQGVLVKH ENSTTRP00000009132/1-492 LLPASYCDLL HKAAAHLGCW QKVDPALCSN VLQHPWTEEC MWPQGVLVKH ENSP00000338165/1-492 LLPASYCDLL HKAAAHLGCW QKVDPALCSN VLQHPWTEEC MWPQGVLVKH BACU003298/1-505 LLPASYCDLL HKAAAHLGCW QKVDPALCSN VLQHPWTEEC MWPQGVLVKH ENSBTAP00000022547/1-492 LLPASYCDLL HKAAAHLGCW QKVDPALCSN VLQHPWTEEC MWPQGVLVKH 401 450 bmy_14982T0/1-309 SKNVYKAVGH YNVAIPSDVS HFRFHV---- ---------- ---------- ENSTTRP00000009132/1-492 SKNVYKAVGH YNVAIPSDVS HFRFHFFFSK PLRILNILLL LEGAVIVYQL ENSP00000338165/1-492 SKNVYKAVGH YNVAIPSDVS HFRFHFFFSK PLRILNILLL LEGAVIVYQL BACU003298/1-505 SKNVYKAVGH YNVAIPSDVS HFRFHFFFSK PLRILNILLL LEGAVIVYQL ENSBTAP00000022547/1-492 SKNVYKAVGH YNVAIPSDVS HFRFHFFFSK PLRILNILLL LEGAVIVYQL 451 500 bmy_14982T0/1-309 -SLLP---WE GGVGPDLE-- ---------- ------GRRI SWAGR----- ENSTTRP00000009132/1-492 YSLMSSDKWH QTISLALILF SNYYAFFKLL RDRLVLGKAY SYSVNPQRDL ENSP00000338165/1-492 YSLMSSEKWH QTISLALILF SNYYAFFKLL RDRLVLGKAY SYSASPQRDL BACU003298/1-505 YSLMSSDKWH QTISLALILF SNYYAFFKLL RDRLVLGKAY SYSVNPQRDL ENSBTAP00000022547/1-492 YSLMSSDKWH QTISLALILF SNYYAFFKLL RDRLVLGKAY SYSANSQRDL 501 550 bmy_14982T0/1-309 ----- ENSTTRP00000009132/1-492 DHRFS ENSP00000338165/1-492 DHRFS BACU003298/1-505 DHRFS ENSBTAP00000022547/1-492 DHRFS