KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:38 2014 Check: 00 .. Name: ENSP00000210313/1-504 Len: 504 Check: 9892 Weight: 1.00 Name: ENSBTAP00000022548/1-504 Len: 504 Check: 9020 Weight: 1.00 Name: bmy_04568T0/1-373 Len: 504 Check: 5439 Weight: 1.00 Name: BACU007300/1-504 Len: 504 Check: 9959 Weight: 1.00 Name: ENSTTRP00000006279/1-504 Len: 504 Check: 434 Weight: 1.00 // 1 50 ENSP00000210313/1-504 MAAQALALLR EVARLEAPLE ELRALHSVLQ AVPLNELRQQ AAELRLGPLF ENSBTAP00000022548/1-504 MAAQALALLR EVSRLEAPLE ELRALQSLLQ SVPLSELREQ AAELRLGPLF bmy_04568T0/1-373 MAAQAVLLLR EVSRLEAPLE ELRALHSVLQ SVPLSELREQ AAELRLGPLF BACU007300/1-504 MAAQAVSLLR EVSRLEAPLE ELRALQSVLQ SVPLSELREQ AAELRLGPLF ENSTTRP00000006279/1-504 MAAQALSLLR EVSRLEAPLE ELRALQSVLQ SVPLSELREQ AAELRLGPLF 51 100 ENSP00000210313/1-504 SLLNENHREK TTLCVSILER LLQAMEPVHV ARNLRVDLQR GLIHPDDSVK ENSBTAP00000022548/1-504 SLLNENHREQ TTLCVSILER LLQALEPVHV ARNLRVDLQR GLTHPNDSVK bmy_04568T0/1-373 SLLNENHREQ TXLCV----- ---------- ---------- ---------- BACU007300/1-504 SLLNEHHREQ TTLCVSILER LLQALEPVHV ARNLRVDLQR GLTHPNDSVK ENSTTRP00000006279/1-504 SLLNENHREQ TTLCVSILER LLQALEPVHM ARNLRVDLQR GLTHPNDSVK 101 150 ENSP00000210313/1-504 ILTLSQIGRI VENSDAVTEI LNNAELLKQI VYCIGGENLS VAKAAIKSLS ENSBTAP00000022548/1-504 ILTLSQVGRI VENSDAVTEI LNNAELLKQI VYCIGGENLS VAKTAIKSLS bmy_04568T0/1-373 -------GRI VENSDAVTEI LNNAELLKQI VYCIGGENLS VAKAAIKSLS BACU007300/1-504 ILTLSQVGRI VENSDAVTEI LNNAELLKQI VYCIGGENLS VAKAAIKSLS ENSTTRP00000006279/1-504 ILTLSQVGRI VENSDAVTEI LNNAELLKQI IYCIGGENLS VAKAAIKSLS 151 200 ENSP00000210313/1-504 RISLTQAGLE ALFESNLLDD LKSVMKTNDI VRYRVYELII EISSVSPESL ENSBTAP00000022548/1-504 RISLTQAGLE ALFESNLLDD LKSVMKTNDI VRYRVYELIV EISSVSPESL bmy_04568T0/1-373 RISLTQAGLE ALFESNLLDD LKSVMETNDI VRYRVYELIV EISSVSPESL BACU007300/1-504 RISLTQAGLE ALFESNLLDD LKSVMETNDI VRYRVYELIV EISSVSPESL ENSTTRP00000006279/1-504 RISLTQAGLE ALFESNLLDD LKSVMETNDI VRYRVYELIV EISSVSPESL 201 250 ENSP00000210313/1-504 NYCTTSGLVT QLLRELTGED VLVRATCIEM VTSLAYTHHG RQYLAQEGVI ENSBTAP00000022548/1-504 NCCTTSGLVT QLLRELTGED VLVRATCIEM VTSLACTHHG RQYLAQEGVI bmy_04568T0/1-373 NYCTTSGLVT QLLRELTGED VLVRHVCCLK VAN-----H- ---------- BACU007300/1-504 NYCTTSGLVT QLLRELTGED VLVRATCIEM VTSLAYTHHG RQYLAQEGVI ENSTTRP00000006279/1-504 NYCTTSGLVT QLLRELTGED VLVRATCIEM VTSLAYTHHG RQYLAQEGVI 251 300 ENSP00000210313/1-504 DQISNIIVGA DSDPFSSFYL PGFVKFFGNL AVMDSPQQIC ERYPIFVEKV ENSBTAP00000022548/1-504 DQISNIIVGA DADPFSSFYL PGFVKFFGNL AIMDSPQQIC ERYPIFMEKV bmy_04568T0/1-373 ---------- ---------- ----MFFGNL AIMDSPQQIC ERYPVFVEKV BACU007300/1-504 DQISNIIVGA DSDAFSSFYL PGFVKFFGNL AIMDSPQQIC ERYPVFVEKV ENSTTRP00000006279/1-504 DQISNIIVGA DSDPFSSFYL PGFVKFFGNL AIMDSPQQIC ERYPVFVEKV 301 350 ENSP00000210313/1-504 FEMIESQDPT MIGVAVDTVG ILGSNVEGKQ VLQKTGTRFE RLLMRIGHQS ENSBTAP00000022548/1-504 FEMTESQDPT MIGVAVDTIG ILGSNVEGKQ VLQKTGTRFE RLLMKIGYQA bmy_04568T0/1-373 FEMTESQDPT MIGVAVDTIG ILGSNVEGKQ VLQK------ ---------- BACU007300/1-504 FEMTESQDPT MIGVAVDTIG ILGSNVEGKQ VLQKTGTRFE RLLMRIGYQA ENSTTRP00000006279/1-504 FEMTESQDPT MIGVAVDTIG ILGSNVEGKQ VLQKTGTRFE RLLMRIGYQA 351 400 ENSP00000210313/1-504 KNAPVELKIR CLDAISSLLY LPPEQQTDDL LRMTESWFSS LSRDPLELFR ENSBTAP00000022548/1-504 KNASTELKIR CLDALSSLFY LPPEQQTDDL LRMTESWFSS LSRDPLELFR bmy_04568T0/1-373 ---------- ---------- ---------- ---TESWFSS LSRDPLELFR BACU007300/1-504 KNASTELKIR CLDAISSLFY LPPDQQTDDL LRMTESWFSS LSRDPLELFR ENSTTRP00000006279/1-504 KNASTELKIR CLDAISSLFY LPAEQQTDDL LRMTESWFSS LSRDPMELFR 401 450 ENSP00000210313/1-504 GISSQPFPEL HCAALKVFTA IANQPWAQKL MFNSPGFVEY VVDRSVEHDK ENSBTAP00000022548/1-504 GISNQPFPEL HCAALKVFTA IANQPWAQKL MFNSPGFVEY VMDRSVEHDK bmy_04568T0/1-373 GISNQPFLEL HCAALKVFTA IANQPWAQKL MFNSPGFVEY VMDRSVEHDR BACU007300/1-504 GISNQPFLEL HCAALKVFTA IANQPWAQKL MFNSPGFVEY VMDRSVEHDR ENSTTRP00000006279/1-504 GISTQPFFEL HCAALKVFTA IANQPWAQKL MFNSPGFVEY VMDRSVERDR 451 500 ENSP00000210313/1-504 ASKDAKYELV KALANSKTIA EIFGNPNYLR LRTYLSEGPY YVKPVSTTAV ENSBTAP00000022548/1-504 ASKDAKYELV KALANSKTIA EIFGNPNYLR LRTYLSEGPY YVKPISTTAV bmy_04568T0/1-373 ASKDAKYELV KALANSKTIA EIFGNPNYLR LRTYLSEGPY YVKPISTTAV BACU007300/1-504 ASKDAKYELV KALANSKTIA EIFGNPNYLR LRTYLSEGPY YVKPISTTAV ENSTTRP00000006279/1-504 ASKDAKYELV KALANSKTIA EIFGNPNYLR LRTYLSEGPY YVKPISTTAV 501 550 ENSP00000210313/1-504 EGAE ENSBTAP00000022548/1-504 EGAE bmy_04568T0/1-373 EGAE BACU007300/1-504 EGAE ENSTTRP00000006279/1-504 EGAE