KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:45 2014 Check: 00 .. Name: BACU010893/1-172 Len: 386 Check: 9043 Weight: 1.00 Name: ENSTTRP00000007718/1-216 Len: 386 Check: 4761 Weight: 1.00 Name: bmy_01783T0/1-351 Len: 386 Check: 6252 Weight: 1.00 Name: ENSP00000358510/1-189 Len: 386 Check: 1284 Weight: 1.00 Name: ENSBTAP00000022579/1-190 Len: 386 Check: 400 Weight: 1.00 // 1 50 BACU010893/1-172 ---------- ---------- ---------- MLQRRIKSNF CLLGVMLQRQ ENSTTRP00000007718/1-216 RPSSPWGARA PQGRGERLEL LCGPAAPEVR --PRSVAGLE PDLPSLLTPA bmy_01783T0/1-351 -----METST PRAGSQLAPT AARPSSASYR AESRRVSSRD ELAETAAASQ ENSP00000358510/1-189 -----METSA PRAGSQVVAT TAR-HSAAYR ADPLRVSSRD KLTEMAASSQ ENSBTAP00000022579/1-190 -----METST QRTGSHLAQT AAARHSASSR GEAARVSSRD ELAEMAAASQ 51 100 BACU010893/1-172 G--------- ---------- -QKGNFEGNF ESLDLAELAK KQPWWRKLFG ENSTTRP00000007718/1-216 GLPPSGPAPD ASAWRHFVPV PGSRNFEGKF ESLDLAELAK KQPWWRKLFG bmy_01783T0/1-351 G--------- ---------- ----NLEGNF ESLDLAELAK KQPXWRKXFG ENSP00000358510/1-189 G--------- ---------- ----NFEGNF ESLDLAEFAK KQPWWRKLFG ENSBTAP00000022579/1-190 G--------- ---------- ----NFEGKF ESLDLAELAK KQPWWRTLFG 101 150 BACU010893/1-172 QESGPSAEKY NVATQLLIGG VTGWCTGFIF QKVGRLAATA LGGGFFLLQL ENSTTRP00000007718/1-216 QESGPSAEKY SVATQLLIGG VTGWCTGFIF QKVGRLAATA LGGGFFLLQL bmy_01783T0/1-351 XESGPSAEKY SVATQLLIGG VTGWCTGFIF QKVGRLAATA LGGGFFLLQL ENSP00000358510/1-189 QESGPSAEKY SVATQLFIGG VTGWCTGFIF QKVGKLAATA VGGGFFLLQL ENSBTAP00000022579/1-190 QESGPSAEKY SVATQLLIGG VTGWCTGFIF QKVGKLAATA VGGGFFLLQL 151 200 BACU010893/1-172 ANHTGYIRVD WRRGEKDVQK AREQLRIRQS GRTPAGATSR AQEVRPCVRK ENSTTRP00000007718/1-216 ANHTGYIKVD WKRVERDMKK AKEQLKVRKG SQTPAEVKSK ADEVVSFVKK bmy_01783T0/1-351 ANHTDYIKVD GQRVEKDMKK AKEQLKIRKS SQIPTEVKSK LEEVVLFVKK ENSP00000358510/1-189 ANHTGYIKVD WQRVEKDMKK AKEQLKIRKS NQIPTEVRSK AEEVVSFVKK ENSBTAP00000022579/1-190 ANHTGYIKVD WQRVEKDMKK AKEQLKIRKS NQIPTEVKSK AEEVVSFVKK 201 250 BACU010893/1-172 RGRHTTCQPQ VGCPHLSGIL ---------- ---------- ---------- ENSTTRP00000007718/1-216 -------NVL VTGGFFGGFL ---------- ---------- ---------- bmy_01783T0/1-351 -------NVL VTGGFFRGFL LDIRYFLKYH YQVYFPKSEM KQKNKLPFDR ENSP00000358510/1-189 -------NVL VTGGFFGGFL ---------- ---------- ---------- ENSBTAP00000022579/1-190 -------NVL VTGGFFGGFL ---------- ---------- ---------- 251 300 BACU010893/1-172 ---------- ---------K G--------- ---------- ---------- ENSTTRP00000007718/1-216 ---------- ---------L GMAS------ ---------- ---------- bmy_01783T0/1-351 KKKMNDSSDM GQRLQNKRTL GLPSTTLKKR GRPAYCHAAM GIPTSSVTSW ENSP00000358510/1-189 ---------- ---------L GMAS------ ---------- ---------- ENSBTAP00000022579/1-190 ---------- ---------L GMAS------ ---------- ---------- 301 350 BACU010893/1-172 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007718/1-216 ---------- ---------- ---------- ---------- ---------- bmy_01783T0/1-351 LSEQIEVLSL PPYGNSNSKD PMYGIKKLGS EDLKHKCGQL GFGSGNNDTI ENSP00000358510/1-189 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022579/1-190 ---------- ---------- ---------- ---------- ---------- 351 400 BACU010893/1-172 ---------- ---------- ---------- ------ ENSTTRP00000007718/1-216 ---------- ---------- ---------- ------ bmy_01783T0/1-351 LIPTYLGRKY VFGTKLTTSL QVSLIMTEMT QICYEN ENSP00000358510/1-189 ---------- ---------- ---------- ------ ENSBTAP00000022579/1-190 ---------- ---------- ---------- ------