KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:48 2014 Check: 00 .. Name: ENSP00000296980/1-263 Len: 286 Check: 838 Weight: 1.00 Name: ENSBTAP00000022606/1-224 Len: 286 Check: 9934 Weight: 1.00 Name: ENSTTRP00000015391/1-230 Len: 286 Check: 3745 Weight: 1.00 Name: bmy_14479T0/1-253 Len: 286 Check: 6590 Weight: 1.00 Name: BACU014336/1-223 Len: 286 Check: 9041 Weight: 1.00 // 1 50 ENSP00000296980/1-263 MMPKHCF--- -------LGF LISFFLTGVA ---------- ---GTQSTHE ENSBTAP00000022606/1-224 ------L--- -------VSM FSFVSLLIIL ---------- ---ETQPANE ENSTTRP00000015391/1-230 MTPKCCF--- -------LGF LIGVLLPGVV ---------- ---ETQPAHE bmy_14479T0/1-253 MTPVETLLRN AGLHGKPLGR FPPQPGPVHL SSYARALGTR MQAEXQPAHE BACU014336/1-223 ---------- -------MSM FSVAPFLIIL ---------- ---ETQPAHE 51 100 ENSP00000296980/1-263 SLKPQRVQFQ SRNFHNILQW QPGRALTGNS SVYFVQYKIM FSCSMKSSHQ ENSBTAP00000022606/1-224 SLKPQRVHFQ SRNFHNILRW QPGQACLGNN SIYFVQYKM- ---------- ENSTTRP00000015391/1-230 SLKPQRVHFQ SQNFHNILHW QPGRACPGNS SIYFVQYKT- ---------- bmy_14479T0/1-253 SLKPQRVHFQ SQNFHNVLHW QPGRACPGNR SIYFVQYKT- ---------- BACU014336/1-223 SLKPQRVHFQ SQNFHNILHW QPGRACPGNS SIYFVQYKT- ---------- 101 150 ENSP00000296980/1-263 KPSGCWQHIS CNFPGCRTLA KYGQRQWKNK EDCWGTQELS CDLTSETSDI ENSBTAP00000022606/1-224 ---------- ---------- -YGERQWKNK ETCWGIREFF CDLTNETSDI ENSTTRP00000015391/1-230 ---------- ---------- -YGQRQWKDK EDCWGIQEFF CDLTNETSDI bmy_14479T0/1-253 ---------- ---------- -YGQRQWKNK EDCWGIREFF CDLTNETSDI BACU014336/1-223 ---------- ---------- -YGQRQWKNK EDCWGIREFF CDLTNETSDI 151 200 ENSP00000296980/1-263 QEPYYGRVRA ASAGSYSEWS MTPRFTPWWE TKIDPPVMNI TQVNGSLLVI ENSBTAP00000022606/1-224 WEPYYGRVKT ALAGIHSGWT MTQRFIPWWE TKIDPPVMNI THVNGSLLVN ENSTTRP00000015391/1-230 WEPYYGRVRT TLAGVHSGWT MTQRFFPWWE TKIDPPFMNI TQVNGSLLVN bmy_14479T0/1-253 WEPYYGRVRT TLAGVHSGWT MTQRFSPWWE TKIDPPVMNI TQVNGSLLVN BACU014336/1-223 WEPYYGRVRT TLAGVHSGWT MTQRFSPWWE TKLDPPVLNI TQVNGSLLVN 201 250 ENSP00000296980/1-263 LHAPNLPYRY QKEKNVSIED YYELLYRVFI INNSLEKEQK VYEGAHRAVE ENSBTAP00000022606/1-224 LHAPNLPYRD QEGENVSME- YYELVYRVFI FNNSLEKEQK VYEGAHRVVE ENSTTRP00000015391/1-230 LHAPNLPYRD QKRKNVSME- YYGLVYRVFV INNSLEKEQK VYEGAHRVVE bmy_14479T0/1-253 LHAPNLPYRD QKRKNVSME- YYGLVYRVFV INNSLKKEQK VYEGAHRVVE BACU014336/1-223 LHAPNLPYRD QKRKNVSME- YYGLVYRVFV INNSLEKEQK VYEGAHRAVE 251 300 ENSP00000296980/1-263 IEALTPHSSY CVVAEIYQPM LDRRSQRSEE RCVEIP ENSBTAP00000022606/1-224 IKVTSPHTGY CVVAELYQPM LDRKSQRSRE RCMETP ENSTTRP00000015391/1-230 IEALTPHTGY CIVAEMYQPT LDRRSQRSQE RCVESP bmy_14479T0/1-253 IEALTPHTGY CIMAEMYQPT LDRRSQRSQQ RCVESP BACU014336/1-223 IEALTPHTGY CIVAEMYQPT LDRRSQRSQQ RCVESP