KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:17:48 2014 Check: 00 .. Name: bmy_04734T0/1-411 Len: 584 Check: 5832 Weight: 1.00 Name: ENSBTAP00000022607/1-584 Len: 584 Check: 3239 Weight: 1.00 Name: BACU003183/1-531 Len: 584 Check: 1348 Weight: 1.00 Name: ENSTTRP00000003534/1-559 Len: 584 Check: 3386 Weight: 1.00 // 1 50 bmy_04734T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022607/1-584 GGMRAPPGPL CTPQGVVPVS FPKSSSVLQG KGAFVCRHLS EKSLSKSLGL BACU003183/1-531 ---------- ---------- ---------- ---------- -------LGL ENSTTRP00000003534/1-559 ---------- ---------- --PPALRAAS AGPSVSLYMS EDEVRRLIGL 51 100 bmy_04734T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022607/1-584 DAELYYVRND LISHYALSFN LLVPSETNFL HFTWHAKSKV EYKLGFQVDN BACU003183/1-531 DAELYYVRND LISHYALSFN LLVPSETNFL HFTWHAKSKV EYKLGFQVDN ENSTTRP00000003534/1-559 DAELYYVRND LISHYALSFN LLVPSETNFL HFTWHAKSKV EYKLGFQVDN 101 150 bmy_04734T0/1-411 ---MDMPQVN ISAQGEVPRT LS-VFRVELS CTGKVDSEVM ILMQLNLTVN ENSBTAP00000022607/1-584 FVAMDMPQVN ISAQGEVPRT LSAVFRVELS CTGKVDSEVM ILMQLNLTVN BACU003183/1-531 FVAMDMPQVN ISAQGEVPRT LS-VFRVELS CTGKVDSEVM ILMQLNLTVN ENSTTRP00000003534/1-559 FVAMDMPQVN ISAQGEVPRT LS-VFRVELS CTGKVDSEVM ILMQLNLTVN 151 200 bmy_04734T0/1-411 SSKNFTVLNF KRRKMCYKKL EEVKTSSLDK NTSRTIYDPV HAAPTTSTRV ENSBTAP00000022607/1-584 SSKNFTVLNF KRRKMCYKKL EEVKTSALDK NTSRTIYDPV HAAPTTSTRV BACU003183/1-531 SSKNFTVLNF KRRKMCYKKL EEVKTSSLDK NTSRTIYDPV HAAPTTSTRV ENSTTRP00000003534/1-559 SSKNFTVLNF KRRKMCYKKL EEVKTSSLDK NTSRTIYDPV HAAPTTSTRV 201 250 bmy_04734T0/1-411 FYISVGVCCA VIFLVAIILA VLHLHSMKRI ELDDSISASS SSQGLSQPST ENSBTAP00000022607/1-584 FYISVGVCCA VIFLVAIILA VLHLHSMKRI ELDDSISASS SSQGLSQPST BACU003183/1-531 FYISVGVCCA VIFLVAIILA VLHLHSMKRI ELDDSISASS SSQGLSQPST ENSTTRP00000003534/1-559 FYISVGVCCA VIFLVAIILA VLHLHSMKRI ELDDSISASS SSQGLSQPST 251 300 bmy_04734T0/1-411 QTTQYLRADT PNNATPITS- --YPTLRIEK NDLRSVTLLE AKAKVKDIAI ENSBTAP00000022607/1-584 QTTQYLRADT PNNATPITSS SGYPTLRIEK NDLRSVTLLE AKAKVKDIAI BACU003183/1-531 QTTQYLRADT PNNATPITS- --YPTLRIEK NDLRSVTLLE AKAKVKDIAI ENSTTRP00000003534/1-559 QTTQYLRADT PNNATPITSS SGYPTLRIEK NDLRSVTLLE AKAKVKDIAI 301 350 bmy_04734T0/1-411 SRERITLKDV LQEGTFGRIF HGILVDEKDP NKEKQAFVKT VK--DQASEI ENSBTAP00000022607/1-584 SRERITLKDV LQEGTFGRIF HGILVDEKDP NKEKQAFVKT VKDTDQASEI BACU003183/1-531 SRERITLKDV LQEGTFGRIF HGILVDEKDP NKEKQAFVKT VK--DQASEI ENSTTRP00000003534/1-559 SRERITLKDV LQEGTFGRIF HGILVDEKDP NKEKQAFVKT VK--DQASEI 351 400 bmy_04734T0/1-411 QVTMMLTESC KLRGLHHRNL LPITHVCIEE GEKPMVILPY MNWGNLKLFL ENSBTAP00000022607/1-584 QVTMMLTESC KLRGLHHRNL LPITNVCIEE GEKPMVILPY MNWGNLKLFL BACU003183/1-531 QVTMMLTESC KLRGLHHRNL LPITHVCIEE GEKPMVILPY MNWGNLKLFL ENSTTRP00000003534/1-559 QVTMMLTESC KLRGLHHRNL LPITHVCIEE GEKPMVILPY MNWGNLKLFL 401 450 bmy_04734T0/1-411 RQCKLVEANN PQAISQQDLV HMAIQIACGM SYLARREVIH KDLAARNCVI ENSBTAP00000022607/1-584 RQCKLVEANN PQAISQQDLV HMAIQIACGM SYLARREVIH KDLAARNCVI BACU003183/1-531 RQCKLVEANN PQAISQQDLV HMAIQIACGM SYLARREVIH KDLAARNCVI ENSTTRP00000003534/1-559 RQCKLVEANN PQAISQQDLV HMAIQIACGM SYLARREVIH KDLAARNCVI 451 500 bmy_04734T0/1-411 DDTLQVKITD NALSRDLFPM DYHCLGDNEN RPVRWMALES LVNNEFSSAS ENSBTAP00000022607/1-584 DDTLQVKITD NALSRDLFPM DYHCLGDNEN RPVRWMALES LVNNEFSSAS BACU003183/1-531 DDTLQVKITD NALSRDLFPM DYHCLGDNEN RPVRWMALES LVNNEFSSAS ENSTTRP00000003534/1-559 DDTLQVKITD NALSRDLFPM DYHCLGDNEN RPVRWMALES LVNNEFSSAS 501 550 bmy_04734T0/1-411 DVVSAG---- -------TP- ---------G YQQNGGG--- ---------- ENSBTAP00000022607/1-584 DVWAFGVTLW ELMTLGQTPY VDIDPFEMAA YLKDGYRIAQ PINCPDELFA BACU003183/1-531 DVWAFGVTLW ELMTLGQTPY VDIDPFEMAA YLKDGYRIAQ PINCPDELFA ENSTTRP00000003534/1-559 DVWAFGVTLW ELMTLGQTPY VDIDPFEMAA YLKDGYRIAQ PINCPDELFA 551 600 bmy_04734T0/1-411 ---------- ---------S KCF------- ---- ENSBTAP00000022607/1-584 VMACCWALDP EERPKFQQLV QCLTEFHAAL GAYV BACU003183/1-531 VMACCWALDP EERPKFQQLV QCLTEFHAAL GAYV ENSTTRP00000003534/1-559 VMACCWALDP EERPKFQQLV QCLTEFHAAL GAYV