KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:50 2014 Check: 00 .. Name: ENSP00000379754/1-511 Len: 518 Check: 9265 Weight: 1.00 Name: ENSBTAP00000022621/1-517 Len: 518 Check: 3905 Weight: 1.00 Name: ENSTTRP00000002699/1-512 Len: 518 Check: 469 Weight: 1.00 Name: bmy_09383T0/1-260 Len: 518 Check: 6418 Weight: 1.00 Name: BACU006218/1-483 Len: 518 Check: 9366 Weight: 1.00 // 1 50 ENSP00000379754/1-511 MSKVARSSSE SDVQLWETEE DDMTEGDLGY GLGRKPGGIY EIEFSH--RS ENSBTAP00000022621/1-517 MSRVARLPSE AEGQAWETED DDTAEGDLGY GLGRRPGGIC EVPVSHLFKS ENSTTRP00000002699/1-512 MSMEARPPSE AEGQAWEAED DDMAEGDLGY GLRRRPGGIY EVQVSHVFTS bmy_09383T0/1-260 ---------- ---------- ---------- ---------- ---------- BACU006218/1-483 MSREARPQSE AEGQAWEAED DDMAEGDLGY GLRRRPGGIY EVQVSHLFTS 51 100 ENSP00000379754/1-511 RKRSDGKNFS PPPFPRKGEE RNEASFQYSK HKSQQDTFPQ VSRISNYRRQ ENSBTAP00000022621/1-517 RKRSDGKNSS PPLFSRNGDK RNSAVFQYSR QKSFQDTYLE GPRIPHHKRQ ENSTTRP00000002699/1-512 RKRSDGKAFS PPPFSRNGEE RNSAVFQYSK HKSLHDTYPE GPQIPCHGRQ bmy_09383T0/1-260 ---------- ---------- ---------- ---------- ---------- BACU006218/1-483 RRRSDGKTFS PPPFSRNGEE RNSAVFQYSK HKSLHDTYPE GPQIPYHGRQ 101 150 ENSP00000379754/1-511 SSTVDSNSEL SNEELRQCLN ETLEEVEMLK TELEASQRQL RGKEEALKIL ENSBTAP00000022621/1-517 SST-DSNSEL SNVELRQYLH ETLEEVEILK TELEASQRQL EGKEEALKIL ENSTTRP00000002699/1-512 SSTVDSDSEL SNVELRQRLQ ETLEEVEVLK TELEASQRHL EGKEEALRIL bmy_09383T0/1-260 ---------- ---------- ---------- ---------- ---------- BACU006218/1-483 SST-DSNSEL SNVELRQRLH ETLE------ ---------- ---------- 151 200 ENSP00000379754/1-511 QSMAILGKAT SHTQAVLQKT MEQNRSLEKE INALQWEIEF DHNRFKNIEE ENSBTAP00000022621/1-517 QSMAIFGKAT SHTQAVLQKT VEQKRSLEKE INALQWEIQF DQNRFKNIEE ENSTTRP00000002699/1-512 QSNAIFGKAT SHTQAVLQKT VEQKRSLEKE INALQWEIEF DRNRFKNIEE bmy_09383T0/1-260 ---------- ---------- ---------- ---------- ---------- BACU006218/1-483 ---AIFGKAT SHTQAVLQKT VEQKRSLEKE INVLQWEIEF DRNRFKNIEE 201 250 ENSP00000379754/1-511 SWIQKYDRLN CENAVLKENL KVKTEEIKML KSDNAVLNQR YLEALAMLDI ENSBTAP00000022621/1-517 SWIQKYDRLN CENAVLKETL KLKTEEIKML KSENAILNQQ YLEVLAMLDI ENSTTRP00000002699/1-512 SWIQRYDRLN CENAVLKETL KLKTEEIKML KSENTILNQQ YLEALAMLDI bmy_09383T0/1-260 ---------- ---------- ---------- ---------- ---------- BACU006218/1-483 SWIQKYDRLS CENAVLKETL KLKTEDIKML KSKNTILNQQ YLEALALLDI 251 300 ENSP00000379754/1-511 K-QQKMAQEN MCCDKSGFAE ASGLELAVLG ACLCHGPGGN PCSCARMAAS ENSBTAP00000022621/1-517 KQQQQMAQED TCQDGSGFSE VSGLELAVLG ACLCHRPRGS PCACARLAAS ENSTTRP00000002699/1-512 K-QQKMAQEN TCQDTSGFTE VSGLELAVLG ACLCHGPRGS PCTCARLAAS bmy_09383T0/1-260 -----MAQEN TCQDTSGFTE VSGLELAVLG ACLCHGPRGS PCTCARLAAS BACU006218/1-483 K-QQKMAQEN TCQDTSGFTE VSGLEV-VLG ACLCHGPRGS PCTCARLAAS 301 350 ENSP00000379754/1-511 TRKLLLQLKQ E--LEILQKS KEEAYVMADA FRIAFEQQLM RKNDQALQLT ENSBTAP00000022621/1-517 TRKMLLQLKQ ENQMELLQKS KEEAYIMADA FRIAFEQQLM RKNDQALRLT ENSTTRP00000002699/1-512 TRKMLLQVKQ E--LELLQKS KEEAYIMADA FRIAFEQQLM RKNDQALRLT bmy_09383T0/1-260 TRKMLLQVKQ E--LELLQKS KDEAYIMADA FRIAFEQQLM RKNDQALRLT BACU006218/1-483 TRKMLLQVKQ E--LELLQKS KEEAYIMADA FRIAFEQQLM RKNDQALRLT 351 400 ENSP00000379754/1-511 QMDKMHKKAT KWMNWKHLKE DGFPSPRSKK TFGQRLLGML PSENSSKRME ENSBTAP00000022621/1-517 QTDKMCKKAT KWISWKHLKE NGSLSQGSKK TLGQKLSGML PSENSSKSTN ENSTTRP00000002699/1-512 QMDKMCKKAT KGTNWKHLKD DGLPSQRSKK TLGQKLLGML PLENSSKSTG bmy_09383T0/1-260 QMDKMCKKAT KGTNWKHLKD DGLPSQRSKK TLGQKLLGML PLENSSKSTD BACU006218/1-483 QMDKMCKKAT KGTNWKHLKD DGLPSQRSKK TLGQKLLGML PLENSSKSTD 401 450 ENSP00000379754/1-511 DQDSPQEVLK MLIDLLNDKE EALAHQRKVS YMLARALEDK DTASNENKEK ENSBTAP00000022621/1-517 DQDDPQEIFK MLIDLLNDKE EALAHQRKVS YMLARALENK DTTSKEIKER ENSTTRP00000002699/1-512 DQHDPQEVFK TLTDLLNDKE EALAHQRKVS YMLARALEDR GTTSKENKEK bmy_09383T0/1-260 DQHDPQEVFK MLIDLLNDKE EALAHQRKVS YMLARALEDK GTTSKENKGK BACU006218/1-483 DQHDPQEVFK MLIDLLNDKE EALAHQRKVS YMLARALEDK GTTSKENKGK 451 500 ENSP00000379754/1-511 NPIKENFPFN NPWRKTSEFS VLGDPIHSSV CILNSVGCIC SIQHSQIDPN ENSBTAP00000022621/1-517 NSMKDSFTLK NPWQKILEFP VSCDPVHSGV QIFNSVGCIC SIQHFQTDQK ENSTTRP00000002699/1-512 NPMKDNSPLK NPWQKTSEFP VLRDPVHSSV QIFNSVGCIC SIQHFQTDQY bmy_09383T0/1-260 NPMKDNSPLK NPWQKTSEFP VLRDPVHSSV QIFNSVGCIC SIQHFQTDQN BACU006218/1-483 NPMKDNSPLK NPWQKTSEFP VLRDPVHSSV QIFNSVGCIC SIQHFQTDQN 501 550 ENSP00000379754/1-511 Y-RTLKRSHS LPSSIIF- ENSBTAP00000022621/1-517 YTRTLKRSHS LPSILFFI ENSTTRP00000002699/1-512 YTRT-KRS-C LPSNIMY- bmy_09383T0/1-260 YTRTLKRSYS LPSNIMY- BACU006218/1-483 YTRTLKRSYS LPSNIMY-