KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:17:50 2014 Check: 00 ..
Name: ENSP00000331214/1-156 Len: 163 Check: 1851 Weight: 1.00
Name: ENSBTAP00000022623/1-136 Len: 163 Check: 3113 Weight: 1.00
Name: bmy_04506T0/1-98 Len: 163 Check: 1158 Weight: 1.00
Name: ENSTTRP00000011557/1-131 Len: 163 Check: 5052 Weight: 1.00
//
1 50
ENSP00000331214/1-156 MATQQVDSRR QVAAEQVAAQ LLERRRGSHC DDEKQTLLAL LILVLYLSTE
ENSBTAP00000022623/1-136 MVVHQVGSRG RVAAE----- ----RRGSRC EDRKQTLLAL LILVLYVGTG
bmy_04506T0/1-98 MVIQQVGSRG RVAPE----- ----RRGGHS EDKK------ ----------
ENSTTRP00000011557/1-131 MVIQQVHNRG RVAAE----- ----RRGGHS EDKKQTLLAL LILVLYVGTG
51 100
ENSP00000331214/1-156 IWGSSWEVSE RIRECNYYQN LAVPQGLEYQ TNEPSEEPIK TIRNWLKEKL
ENSBTAP00000022623/1-136 VSGRSWEVSE RIRECNYPQN PVTSQVFEYQ TSDSPEEPIK VMRTWLKENL
bmy_04506T0/1-98 ---------- ---------- ---------Q TNDPSEEPVK VIRTWLKENL
ENSTTRP00000011557/1-131 ISGRSWEVSE RIRECNYVQN PMTSQVFEYQ TNDPSEEPIK VIRTWWKENL
101 150
ENSP00000331214/1-156 HVFSEKLEEE VQQL------ -EQLAWDLEL WLDALLGEPH QEEHCSTYKS
ENSBTAP00000022623/1-136 HVFLEKLEKE VQEL------ -EQLVRDLEE WLDVLLGEGH PEQLCSTLRN
bmy_04506T0/1-98 HVFVEKLEKE VRDLEQLVRD VEQLVRDLEE WLDALLGDGY PEEPCATLKN
ENSTTRP00000011557/1-131 HVFVEKLEKG VRDL------ -EQLVQDLEE WLDALLGDGY PEEPSAT---
151 200
ENSP00000331214/1-156 HLHLEHEVSI RDH
ENSBTAP00000022623/1-136 HL-------- ---
bmy_04506T0/1-98 HL-------- ---
ENSTTRP00000011557/1-131 ---------- ---