KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:16 2014 Check: 00 .. Name: ENSP00000354575/1-649 Len: 916 Check: 7290 Weight: 1.00 Name: BACU000591/1-834 Len: 916 Check: 3839 Weight: 1.00 Name: ENSBTAP00000022648/1-429 Len: 916 Check: 4998 Weight: 1.00 Name: bmy_12273T0/1-656 Len: 916 Check: 5938 Weight: 1.00 Name: ENSTTRP00000008830/1-558 Len: 916 Check: 2245 Weight: 1.00 // 1 50 ENSP00000354575/1-649 -------MQQ DGLGVGTRNG SGKGRSVHPS WPWCAPRPL- -RYFGRDARA BACU000591/1-834 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022648/1-429 ---------- ---------- ---------- ---------- ---------- bmy_12273T0/1-656 MFPLVKILEQ GGLGIGTRNG SRKGRSRHPS QPWCAPRPLP SRYLGGDARA ENSTTRP00000008830/1-558 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000354575/1-649 RRAQTAAMAL LAGGLSRG-L GSHPAAAGRD AVVFVWLLLS TWCTAPARAI BACU000591/1-834 -------MAP LVRRLFWGRL GSCPATPGWG TVVFVWLFLS TLCTAPAGAI ENSBTAP00000022648/1-429 ---------- ---------- ---------- ---------- ---------- bmy_12273T0/1-656 RRAQTAEMAP VARRLFWGRL GSCPATPGWG TVVFVWLFLS TLCTAPAGAI ENSTTRP00000008830/1-558 ---------- ---------- ---------- ---------- -----PASAI 101 150 ENSP00000354575/1-649 QVTVSNPYHV VILFQPVTLP CTYQMTSTPT QPIVIWKYKS FCRDRIADAF BACU000591/1-834 QVTVSDPYHV VILFQPVTLP CTYQSTTTPT APIVIWKYKS FCRDRIADAF ENSBTAP00000022648/1-429 ---------- ---------- ---------- ---------- ---------- bmy_12273T0/1-656 QVTVSQPYHV VILFQPVTLP CTYQSTTTPT APIVIWKYKS FCRDRIADAF ENSTTRP00000008830/1-558 QVTVTDPYHV VILFQPVTLP CSYQSTTTPT APIVIWKYKS FCRDRLADAF 151 200 ENSP00000354575/1-649 SPASVDNQLN AQLAAGNPGY NPYVECQDSV RTVRVVATKQ GNAVTLGDYY BACU000591/1-834 SPASVDSQLN AQLAAGNPGY NPYVECQDSV RTVRVVATKQ GNAVTLGDYY ENSBTAP00000022648/1-429 ---------- ---------- ---------- ---------- ---------- bmy_12273T0/1-656 SPASVDNQLN AQLAAGNPGY NPYVECQDSV RTVRVVATKQ GNAVTLGDYY ENSTTRP00000008830/1-558 SPASVDNQLN AQLAAGNPGY NPYVECQDSV RTVRVVATKQ GNAVTLGDYY 201 250 ENSP00000354575/1-649 QGRRITITGN ADLTFDQTAW GDSGVYYCSV VSAQDLQGNN EAYAELIVLG BACU000591/1-834 QGRRITITGN ADLTFDQTAW GDSGVYYCSV VSAQDLQGNN EAFAELIVLG ENSBTAP00000022648/1-429 ---------D ADLTFDQTAW GDSGVYYCSV VSAQDLQGNN EAYAELIVL- bmy_12273T0/1-656 QGRRITITGN ADLTFDQTAW GDSGVYYCSV VSAQDLQGNN EAYAELIVLG ENSTTRP00000008830/1-558 QGRRITITGN ADLTFEQTAW GDSGVYYCSV VSAQDLQGNN EAYAELIVLG 251 300 ENSP00000354575/1-649 RTSGVAELLP GFQAGPIEDW LFVVVVCLAA FLIFLLLGIC WCQCCPHTCC BACU000591/1-834 RTSGVAELLP GFQAGPMEDW LFVVVVCLAA FLIFLLLGIC WCQCCPHTCC ENSBTAP00000022648/1-429 ---------- --------DW LFVVVVCLAA FLVFLLLGIC WCQCCPHTCC bmy_12273T0/1-656 RTSGVAELLP GFQAGPMEDW LFVVVVCLAA FLVFLLLGIC WCQCCPHTCC ENSTTRP00000008830/1-558 RTSGVAELLP GFQAGPMEDW LFVVVVCLAA FLVFLLLGIC WCQCCPHTCC 301 350 ENSP00000354575/1-649 CYVRCPCCPD KCCCPEALYA AGKAATSGVP SIYAPSTYAH LSPAKTPPPP BACU000591/1-834 CYVRCPCCPE KCCCPEALYA AGKAATSGVP SIYAPSTYAH LSLAKTPPPP ENSBTAP00000022648/1-429 CYVRCPCCPE KCCCPEALYA AGKAATSGVP SIYAPSTYAH LSPAKTPPPP bmy_12273T0/1-656 CYVRCPCCPE KCCCPEALYA AGKAATSGVP SIYAPSTYAH LSPAKTPPPP ENSTTRP00000008830/1-558 CYVRCPCCPE KCCCPEALYA AGKAATSGVP SIYAPSTYAH LSPAKT---P 351 400 ENSP00000354575/1-649 AMIPMGPAYN GYPGGYPGDV DRSSSAGGQG SYVPLLRDTD SSVASEVRSG BACU000591/1-834 AMIPMGPLYN GYS----GDF DRNS------ ---------- ----SEIRSG ENSBTAP00000022648/1-429 AMIPMGPLYN GYS----GDF DRNSSVGGHS SRVPLLRDTD SSVTSEIRSG bmy_12273T0/1-656 AMIPMGPLYN GYS----GDF DRNSSVGGHS SQVPLLRDTD SNVTSEIRSG ENSTTRP00000008830/1-558 AMIPMGPLYN GYS----GDF DRNSSVGGHS SQVPLLRDTD SNVTSEIRSG 401 450 ENSP00000354575/1-649 YRIQASQQDD SMRVLYYMEK ELANFDPSRP GPPSGRVERA MSEVTSLHED BACU000591/1-834 YRIQANQQDD SMRVLYYMEK ELANFDSSRP GPPNGRVERA MSEVTSLHED ENSBTAP00000022648/1-429 YRIQANQQDD SMRVLYYMEK ELANFDPSRP GPPNGRVERA MSEVTSLHED bmy_12273T0/1-656 YRIQANQQDD SMRVLYYMEK ELANFDSSRP GPPNGRVERA MSEVTSLHED ENSTTRP00000008830/1-558 YRIQANQQDD SMRVLYYMEK ELANFDSSRP GPPNGRVERA MSEVTSLHED 451 500 ENSP00000354575/1-649 DWRSRPSRGP ALTPIRDEEW GGHSPRSPRG WDQEPAREQA GGGWRARRPR BACU000591/1-834 DWRSRPSRGP ALTPIRDEEW GHHSPRSSRR WEQEPPLDRP GSGWGAGRPR ENSBTAP00000022648/1-429 DWRSRPSRGP ALTPIRDEEW GHHSPRSSRR WEQEAPMERP GNSRGAGRPR bmy_12273T0/1-656 DWRSRPSRGP ALTPIRDEEW GHHSPRSSRR WEQEPPLDRP GSGWGAGWPR ENSTTRP00000008830/1-558 DWRSRPSRGP ALTPIRDEEW GHHSPRSSRR WEQEPPLDRP GSGWGAGRPR 501 550 ENSP00000354575/1-649 ARSVDALDDL TPPSTAESGS RSPTSNGGRS RAYMPPRSRS RDDLY--DQD BACU000591/1-834 ARSVDALDDL ARPGSAESG- RSPPSSGRRG RACAPPRSRS RDDLYDQDQD ENSBTAP00000022648/1-429 ARSVDALDDF TRPGSAESGR RSPPSSGRRG RAYAPPRSRS RDDLYDQDQD bmy_12273T0/1-656 ARSVDALDDL ARPGSAESG- RSPPSSGRRG RACAPPRSRS RDDLYDQDQD ENSTTRP00000008830/1-558 ARSVDALDDL ARPGSAESG- RSPPSGGRRG RACAPPRSRS RDDLYDQDQD 551 600 ENSP00000354575/1-649 DSRDFPRSRD PHYDDFRSRE RPPADPRSHH HRTRDPRDNG S--------- BACU000591/1-834 DSRHFPHSRD PYYDDFRSRG RPHADPRARY HPSRDLPDDG SSHDKGPEAE ENSBTAP00000022648/1-429 DSRHFPHSRD PHYDDFRSRD QPHGDPRARY QRSRDPRDDG S--------- bmy_12273T0/1-656 DSRHFPHSRD PYYDDFRSRG RPHADPRARY HPSRDPPDDG S--------- ENSTTRP00000008830/1-558 DSRHFPHSRD PYYDDFRSRG RPHADPRARY HPSRDPPGDG S--------- 601 650 ENSP00000354575/1-649 ---------- ---------- ---------- ---------- ---RSGDLPY BACU000591/1-834 EGVELQEGGD GPGAEEQTAV AIASVQQAAF GDHNIQYQFR TENNGGQVTY ENSBTAP00000022648/1-429 ---------- ---------- ---------- ---------- ---RSRDPPY bmy_12273T0/1-656 ---------- ---------- ---------- ---------- ---RSGDPQY ENSTTRP00000008830/1-558 ---------- ---------- ---------- ---------- ---RSGDPQY 651 700 ENSP00000354575/1-649 ------DGRL ---------- ---------- --------LE EAVRKKGSEE BACU000591/1-834 RVVQVTDGQL DGQGDTAGAV SVSTAAFAGG QQAVTQVGVD GATQRPGPAA ENSBTAP00000022648/1-429 ------DGRL ---------- ---------- --------LE EALRKKGPAE bmy_12273T0/1-656 ------DGEL ---------- ---------- --------LE EALRKKRPAE ENSTTRP00000008830/1-558 ------DGQL ---------- ---------- --------LE EALRKKGPAE 701 750 ENSP00000354575/1-649 R--------- ------RRPH K--------- --EEEEEAYY P--------- BACU000591/1-834 ASVPPGPAAP FPLAVIQNPF SNGGSPAAEA VSGEARFAYF PASSVGDTTA ENSBTAP00000022648/1-429 ---------- ------RRPY RE-------- --EEEEEAYY P--------- bmy_12273T0/1-656 R--------- ------RRPY R--------- --EEEEEAYH P--------- ENSTTRP00000008830/1-558 R--------- ------RRPY R--------- --EEEEEAYY P--------- 751 800 ENSP00000354575/1-649 ---------- ---------- ---------- -----PAPPP YS-------- BACU000591/1-834 VSVQTTDQSL QAGGQFYVMM TPQDVLQTGT QRTIAPRTHP YSPKIDGTRT ENSBTAP00000022648/1-429 ---------- ---------- ---------- -----PAPPP YS-------- bmy_12273T0/1-656 ---------- ---------- ---------- -----PAPPP YS-------- ENSTTRP00000008830/1-558 ---------- ---------- ---------- -----PAPPP YS-------- 801 850 ENSP00000354575/1-649 -------ETD SQASRERR-- ---------- ---------- ---------- BACU000591/1-834 PRDERRRAQH NEVERRRRDK INNWIVQLSK IIPDCNADNS KTGASKGGIL ENSBTAP00000022648/1-429 -------ETD SQASRERR-- ---------- ---------- ---------- bmy_12273T0/1-656 -------ETD SQASRERR-- ---------- ---------- ---------- ENSTTRP00000008830/1-558 -------ETD SQASRERR-- ---------- ---------- ---------- 851 900 ENSP00000354575/1-649 ---------- ---------- ---------- ---------- ---------- BACU000591/1-834 SKACDYIREL RQTNQRMQET FKEAERLQMD NELLRQQIEE LKNENAVLRA ENSBTAP00000022648/1-429 ---------- ---------- ---------- ---------- ---------- bmy_12273T0/1-656 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008830/1-558 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000354575/1-649 --LKKNLALS RESLVV BACU000591/1-834 QLQQHNLEMV GESARQ ENSBTAP00000022648/1-429 --LKKNLALS RESLVV bmy_12273T0/1-656 --LKKNLGLS RESLVV ENSTTRP00000008830/1-558 --LKKNLGLS RESLVV