KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:20 2014 Check: 00 .. Name: ENSTTRP00000009191/1-743 Len: 743 Check: 3701 Weight: 1.00 Name: ENSP00000355637/1-738 Len: 743 Check: 9388 Weight: 1.00 Name: ENSBTAP00000022677/1-652 Len: 743 Check: 5369 Weight: 1.00 Name: bmy_20898T0/1-557 Len: 743 Check: 747 Weight: 1.00 Name: BACU009567/1-553 Len: 743 Check: 8502 Weight: 1.00 // 1 50 ENSTTRP00000009191/1-743 MRGPPAWXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355637/1-738 MRGPPAWPLR LLEPPSPAEP GRLLPVACVW AAASRVPGSL SPFTGLRPAR ENSBTAP00000022677/1-652 ---------- ---------- ---------- ---------- ---------- bmy_20898T0/1-557 ---------- ---------- ---------- ---------- ---------- BACU009567/1-553 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009191/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXGLARLL ALWTRPSGPS ENSP00000355637/1-738 LWGAGPALLW GVGAARRWRS GCRGGGPGAS RGVLGLARLL GLWARGPGSC ENSBTAP00000022677/1-652 ---------- ---------- ---------- ---------- -LWAARLGAL bmy_20898T0/1-557 ---------- ---------- ---------- ---------- ---------- BACU009567/1-553 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000009191/1-743 RCGALAGPGV PRLPRAALPG GPAAVARAGG EAWLREPALP AAAATPGHDP ENSP00000355637/1-738 RCGAFAGPGA PRLPRARFPG GPAAAAWAGD EAWRRGPAAP -----PGDKG ENSBTAP00000022677/1-652 PTGAGDGRGP PXLPRSALPG CSTLVARAAG EAWRRGPALP AAAATPGHDP bmy_20898T0/1-557 ---------- ---------- ---------- ---------- ---------- BACU009567/1-553 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000009191/1-743 LQRPVAAGRS EAQKLLRLAQ PERRRLAAAV GFLTVSSVIT MSAPFFLGKI ENSP00000355637/1-738 RLRPAAAGLP EARKLLGLAY PERRRLAAAV GFLTMSSVIS MSAPFFLGKI ENSBTAP00000022677/1-652 LLRPAAARRS EAQKLLSLAQ PERRRLAAAV GFLAVSSVIT MSAPFFLGKI bmy_20898T0/1-557 ----MAAGRS EAQKLLRLAQ PERRRLAAAV GFLTVSSVIT MSAPFFLGKI BACU009567/1-553 ---------- ---------- ---------- ---------- MSAPFFLGKI 201 250 ENSTTRP00000009191/1-743 IDVIYTNPSA DYSSSLTRLC LALGGVFLCG AAANAVRVYL MQTSGQRIVN ENSP00000355637/1-738 IDVIYTNPTV DYSDNLTRLC LGLSAVFLCG AAANAIRVYL MQTSGQRIVN ENSBTAP00000022677/1-652 IDVIYTNPSA DCSSSLTRLC LALGGVFLCG AAANAVRVYL MQTSGQRIVN bmy_20898T0/1-557 IDVIYTNPSA DYSSSLTSLC LALGGVFLCG AAANAVRVYL MQTSGQRIVN BACU009567/1-553 IDVIYTNPSA DYSSSLTSLC LVLGGVFLCG AAANAVRVYL MQTSGQRIVN 251 300 ENSTTRP00000009191/1-743 RLRASLFSSV LRQEVAFFDK TRTGELINRL SSDAALLGRS VTENLSDGLR ENSP00000355637/1-738 RLRTSLFSSI LRQEVAFFDK TRTGELINRL SSDTALLGRS VTENLSDGLR ENSBTAP00000022677/1-652 RLRASLFSSV LKQEVAFFDK TRTGELINRL SADAALLGRS VTENLSDGLR bmy_20898T0/1-557 RLRASLFSSV LRQEVAFFDK TRTGELINRL SSDAALLGRS VTENLSDGLR BACU009567/1-553 RLRASLFSSV LRQEVAFFDK TRTGELINRL SSDAALLGRS VTENLSDGLR 301 350 ENSTTRP00000009191/1-743 AVAQASIGIG MMFFVSPNLA TFVLSVVPPI SILAVLYGRY LRKLTKVTQD ENSP00000355637/1-738 AGAQASVGIS MMFFVSPNLA TFVLSVVPPV SIIAVIYGRY LRKLTKVTQD ENSBTAP00000022677/1-652 AGAQASVGIG MMFFVSPKLA TFVLSVVPPV SIIAVLYGRY LRKLTKVTQD bmy_20898T0/1-557 AGAQASIGVA MMFFVSPNLA TFVLSVVPPI SILAVLYGRY LRKLTKVTQD BACU009567/1-553 AGAQASIGVA MMFFVSPNLA TFVLSVVPPI SILAVLYGRY LRKLTKVTQD 351 400 ENSTTRP00000009191/1-743 SLAQATQXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXFAR ENSP00000355637/1-738 SLAQATQLAE ERIGNVRTVR AFGKEMTEIE KYASKVDHVM QLARKEAFAR ENSBTAP00000022677/1-652 SLAQATQLAE ERIGNIRTVR AFGKEMTEIE KYTSKVDHVM QLARKEAFAR bmy_20898T0/1-557 SLAQATQLAE ERIGNIRTVR AFGKEMTEIE KYTSKVDHVM QLARKEAFAR BACU009567/1-553 SLAQATQLAE ERIGNIRTVR AFGKEMTEIE KYTSKVDHVM QLARKEAFAR 401 450 ENSTTRP00000009191/1-743 AGFFGATGLS GNLIVLSVLY KGGLLMGSAH MTVGELSSFL MYAFWVGLSI ENSP00000355637/1-738 AGFFGATGLS GNLIVLSVLY KGGLLMGSAH MTVGELSSFL MYAFWVGISI ENSBTAP00000022677/1-652 AGFFGATGLS GNLIVLSVLY KGGLLMGSAH MTVGELSSFL MYAFWVGVSI bmy_20898T0/1-557 AGFFGATGLS GNLIVLSVLY KGGLLMGSAH MTVGELSSFL MYAFWVGLSI BACU009567/1-553 AGFFGATGLS GNLIVLSVLY KGGLLMGSAH MTVGELSSFL MYAFWVGLSI 451 500 ENSTTRP00000009191/1-743 GGLSSFYSEL MKGLGAGGRL WELLEREPEL PFNEGAILNE KSFQGALEFK ENSP00000355637/1-738 GGLSSFYSEL MKGLGAGGRL WELLEREPKL PFNEGVILNE KSFQGALEFK ENSBTAP00000022677/1-652 GGLSSFYSEL MKGLGAGSRL WELLEREPEL PFNEGAVLNE KSFQGALEFK bmy_20898T0/1-557 G--------- ---------- ---------- ---EGAILNE KSFQGALEFK BACU009567/1-553 GGLSSFYSEL MKGLGAGGRL WELLEREPEL PFNEGAILNE KSFQGALEFK 501 550 ENSTTRP00000009191/1-743 NVHFAYPARP EVPIFQDFSL SIPAGSITAL VGPSGSGKST VISLLLRLYD ENSP00000355637/1-738 NVHFAYPARP EVPIFQDFSL SIPSGSVTAL VGPSGSGKST VLSLLLRLYD ENSBTAP00000022677/1-652 NVHFAYPARP EVPIFQDFSL SIPSGSVTAL VGPSGAGKST VISLLLRLYD bmy_20898T0/1-557 NVHFAYPARP EVPIFQDFSL SIPAGSITAL VGPSGSGKST VISLLLRLYD BACU009567/1-553 NVHFAYPARP EVPIFQDFSL SIPAGSITAL VGPSGSGKST VISLLLRLYD 551 600 ENSTTRP00000009191/1-743 ASAGTISLDG RDIRQLNPVW LRSKIGTVSQ EPILFSCSIA ENIAXXXXXX ENSP00000355637/1-738 PASGTISLDG HDIRQLNPVW LRSKIGTVSQ EPILFSCSIA ENIAYGADDP ENSBTAP00000022677/1-652 PASGTISLDG HDIRQLNPVW LRSKIGTVSQ EPILFSCSIA ENIAYGADNP bmy_20898T0/1-557 PSAGTISLDG RDIRQLNPVW LRSKIGTVSQ EPILFSCSIA ENIAYGADDP BACU009567/1-553 PSAGTISLDG RDIRQLNPVW LRSKIGTVSQ EPILFSCSIA ENIAYGADDP 601 650 ENSTTRP00000009191/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XGQKQRIAIA ENSP00000355637/1-738 SSVTAEEIQR VAEVANAVAF IRNFPQGFNT VVGEKGVLLS GGQKQRIAIA ENSBTAP00000022677/1-652 ASVTAEQIEQ AAAVANAAAF IQNFPQGFST VVGEKGVLLS GGQKQRIAIA bmy_20898T0/1-557 SSVTAEQVEK VAGVANAAAF IRHFPQGFNT VVGEKGILLS GGQKQRIAIA BACU009567/1-553 SSVTAEQVEK VAGVANAAAF IRHFPQGFNT VVGEKGVLLS GGQKQRIAIA 651 700 ENSTTRP00000009191/1-743 RALLKNPRIL LLDEATSALD AENEYLVQQA LDRLMEGRTV FIIAHRLSTI ENSP00000355637/1-738 RALLKNPKIL LLDEATSALD AENEYLVQEA LDRLMDGRTV LVIAHRLSTI ENSBTAP00000022677/1-652 RALLKNPKIL LLDEATSALD AENEHLVQQA LDRLMEGRTV FIIAHRLSTI bmy_20898T0/1-557 RALLKNPRIL LLDEATSALD AENEYLVQQA LDRLMEGRTV FIIAHRLSTI BACU009567/1-553 RALLKNPRIL LLDEATSALD AENEYLVQQA LDRLMEGRTV FIIAHRLSTI 701 750 ENSTTRP00000009191/1-743 KNANMVAVLD RGKITECGKH EELLSKPDGI YRKLMNKQSF ISA ENSP00000355637/1-738 KNANMVAVLD QGKITEYGKH EELLSKPNGI YRKLMNKQSF ISA ENSBTAP00000022677/1-652 KNANVVAVLD QGRIIECGKH EELLLKPDGM YRKLMNKQSF ISA bmy_20898T0/1-557 KNANMVAVLD QGKITECGKH EELLSKPDGI YRKLMNKQSF ISA BACU009567/1-553 KNANMVAVLD QGKITECGKH EELLSKPDGI YRKLMNKQSF ISA