KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:21 2014 Check: 00 .. Name: ENSP00000357342/1-774 Len: 800 Check: 3232 Weight: 1.00 Name: bmy_03387T0/1-800 Len: 800 Check: 3782 Weight: 1.00 Name: ENSBTAP00000022679/1-783 Len: 800 Check: 8626 Weight: 1.00 Name: BACU003962/1-786 Len: 800 Check: 6912 Weight: 1.00 Name: ENSTTRP00000008973/1-780 Len: 800 Check: 6954 Weight: 1.00 // 1 50 ENSP00000357342/1-774 MEAEQRPAAG ASEGATPGLE AVPPVAPPPA TAASGPIPKS ----GPEPKR bmy_03387T0/1-800 MEAEQRPTTR ASDGATPGLE RAPPAAPAST TTASDAIPGS RPGTGPEPKR ENSBTAP00000022679/1-783 MEAEQRPTTG ANDGATPGLE AAPPAAPAST TTASGPVPGS RP--GPEPKR BACU003962/1-786 MEAEQRPTTR ASDGATPGLE RAPPAAPAST TTASDAIPGS RPGTGPEPKR ENSTTRP00000008973/1-780 MEAEQRPTTR ASDGATPGLE RAPPAAPAST TTASDPIPGS RPGTGPEPKR 51 100 ENSP00000357342/1-774 RHLGTLLQPT VNKFSLRVFG SHKAVEIEQE RVKSAGAWII HPYSDFRFYW bmy_03387T0/1-800 RQLGTLLQPT VNKFSLRVFG SHKAVEIEQE RVKSAGAWII HPYSDFRLLW ENSBTAP00000022679/1-783 RQLGTLLQPT VNKFSLRVFG SHKAVEIEQE RVKSAGAWII HPYSDFRFYW BACU003962/1-786 RQLGTLLQPT VNKFSLRVFG SHKAVEIEQE RVKSAGAWII HPYSDFRFYW ENSTTRP00000008973/1-780 RQLGTLLQPT VNKFSLRVFG SHKAVEIEQE RVKSAGAWII HPYSDFRFYW 101 150 ENSP00000357342/1-774 DLI------- -MLLLMVGNL IVLPV----- -GITFFKEEN SPPWIVFNVL bmy_03387T0/1-800 ISLPSPISPS DLPPQQYGSP LPMPLPGLSQ SPIGHRKEEN SPPWIVFNVL ENSBTAP00000022679/1-783 DLI------- -MLLLMVGNL IVLPV----- -GITFFKEEN SPPWIVFNVL BACU003962/1-786 DLI------- -MLLLMVGNL IVLPV----- -GITFFKEEN SPPWIVFNVL ENSTTRP00000008973/1-780 DLI------- -MLLLMVGNL IVLPV----- -GITFFKEEN SPPWIVFNVL 151 200 ENSP00000357342/1-774 SDTFFLLDLV LNFRTGIVVE EGAEILLAPR AIRTRYLRTW FLVDLISSIP bmy_03387T0/1-800 SDTFFLMDLV LNFRTGIVVE EGAEILLAPR AIRTRYLRTW FLVDLISSIP ENSBTAP00000022679/1-783 SDTFFLMDLV LNFRTGIVVE EGAEILLAPR AIRTRYLRTW FLVDLISSIP BACU003962/1-786 SDTFFLMDLV LNFRTGIVVE EGAEILLAPR AIRTRYLRTW FLVDLISSIP ENSTTRP00000008973/1-780 SDTFFLMDLV LNFRTGIVVE EGAEILLAPR AIRTRYLRTW FLVDLISSIP 201 250 ENSP00000357342/1-774 VDYIFLVVEL EPRLDAEVYK TARALRIVRF TKILSLLRLL RLSRLIRYIH bmy_03387T0/1-800 VDYIFLVVEL EPRLDTEVYK TARALRIVRF TKILSLLRLL RLSRLIRYIH ENSBTAP00000022679/1-783 VDYIFLVVEL EPRLDAEVYK TARALRIVRF TKILSLLRLL RLSRLIRYIH BACU003962/1-786 VDYIFLVVEL EPRLDTEVYK TARALRIVRF TKILSLLRLL RLPRLIRYIH ENSTTRP00000008973/1-780 VDYIFLVVEL EPRLDTEVYK TARALRIVRF TKILSLLRLL RLSRLIRYIH 251 300 ENSP00000357342/1-774 QWEEIFHMTY DLASAVVRIF NLIGMMLLLC HWDGCLQFLV PMLQDFPPDC bmy_03387T0/1-800 QWEEIFHMTY DLASAVVRIF NLIGMMLLLC HWDGCLQFLV PMLQDFPPDC ENSBTAP00000022679/1-783 QWEEIFHMTY DLASAVVRIF NLIGMMLLLC HWDGCLQFLV PMLQDFPPDC BACU003962/1-786 QWEEIFHMTY DLASAVVRIF NLIGMMLLLC HWDGCLQFLV PMLQDFPPDC ENSTTRP00000008973/1-780 QWEEIFHMTY DLASAVVRIF NLIGMMLLLC HWDGCLQFLV PMLQDFPPDC 301 350 ENSP00000357342/1-774 WVSINHMVNH SWGRQYSHAL FKAMSHMLCI GYGQQAPVGM PDVWLTMLSM bmy_03387T0/1-800 WVSINHMVNH SWGRQYSHAL FKAMSHMLCI GYGQQAPVGM PDVWLTMLSM ENSBTAP00000022679/1-783 WVSISHMVNH SWGRQYSHAL FKAMSHMLCI GYGQQAPVGM PDVWLTMLSM BACU003962/1-786 WVSINHMVNH SWGRQYSHAL FKAMSHMLCI GYGQQAPVGM PDVWLTMLSM ENSTTRP00000008973/1-780 WVSINHMVNY SWGRQYSHAL FKAMSHMLCI GYGQQAPVGM PDVWLTMLSM 351 400 ENSP00000357342/1-774 IVGATCYAMF IGHATALIQS LDSSRRQYQE KYKQVEQYMS FHKLPADTRQ bmy_03387T0/1-800 IVGATCYAMF IGHATALIQS LDSSRRQYQE KYKQVEQYMS FHKLPADTRQ ENSBTAP00000022679/1-783 IVGATCYAMF IGHATALIQS LDSSRRQYQE KYKQVEQYMS FHKLPADTRQ BACU003962/1-786 IVGATCYAMF IGHATALIQS LDSSRRQYQE KYKQVEQYMS FHKLPADTRQ ENSTTRP00000008973/1-780 IVGATCYAMF IGHATALIQS LDSSRRQYQE KYKQVEQYMS FHKLPADTRQ 401 450 ENSP00000357342/1-774 RIHEYYEHRY QGKMFDEESI LGELSEPLRE EIINFTCRGL VAHMPLFAHA bmy_03387T0/1-800 RIHEYYEHRY QGKMFDEESI LGELSEPLRE EIINFTCRGL VAHMPLFAHA ENSBTAP00000022679/1-783 RIHEYYEHRY QGKMFDEESI LGELSEPLRE EIINFTCRGL VAHMPLFAHA BACU003962/1-786 RIHEYYEHRY QGKMFDEESI LGELSEPLRE EIINFTCRGL VAHMPLFAHA ENSTTRP00000008973/1-780 RIHEYYEHRY QGKMFDEESI LGELSEPLRE EIINFTCRGL VAHMPLFAHA 451 500 ENSP00000357342/1-774 DPSFVTAVLT KLRFEVFQPG DLVVREGSVG RKMYFIQHGL LSVLARGARD bmy_03387T0/1-800 DPSFVTAVLT KLRFEVFQPG DLVVREGSVG RKMYFIQHGL LSVLARGARD ENSBTAP00000022679/1-783 DPSFVTAVLT KLRFEVFQPG DLVVREGSVG RKMYFIQHGL LSVLARGARD BACU003962/1-786 DPSFVTAVLT KLRFEVFQPG DLVVREGSVG RKMYFIQHGL LSVLARGARD ENSTTRP00000008973/1-780 DPSFVTAVLT KLRFEVFQPG DLVVREGSVG RKMYFIQHGL LSVLARGARD 501 550 ENSP00000357342/1-774 TRLTDGSYFG EICLLTRGRR TASVRADTYC RLYSLSVDHF NAVLEEFPMM bmy_03387T0/1-800 TRLTDGSYFG EICLLTRGRR TASVRADTYC RLYSLSVDHF NAVLEEFPMM ENSBTAP00000022679/1-783 TRLTDGSYFG EICLLTRGRR TASVRADTYC RLYSLSVDHF NAVLEEFPMM BACU003962/1-786 TRLTDGSYFG EICLLTRGRR TASVRADTYC RLYSLSVDHF NAVLEEFPMM ENSTTRP00000008973/1-780 TRLTDGSYFG EICLLTRGRR TASVRADTYC RLYSLSVDHF NAVLEEFPMM 551 600 ENSP00000357342/1-774 RRAFETVAMD RLLRIGKKNS ILQRKRSEPS PGSSGGIMEQ HLVQHDRDMA bmy_03387T0/1-800 RRAFETVAMD RLRRIGKKNS ILQRKRSEPS PGSSGGIMEQ HLVQHDRDMA ENSBTAP00000022679/1-783 RRAFETVAMD RLRRIGKKNS ILQRKRSEPS PSSSGGVMEQ HLVQHDRDMA BACU003962/1-786 RRAFETVAMD RLRRIGKKNS ILQRKRSEPS PGSSGGIMEQ HLVQHDRDMA ENSTTRP00000008973/1-780 RRAFETVAMD RLRRIGKKNS ILQRKRSEPS PGSSGGIMEQ HLVQHDRDMA 601 650 ENSP00000357342/1-774 RGVRGRAPST GAQLSGKPVL WEPLVHAPLQ AAAVTSNVAI ALTHQRGPLP bmy_03387T0/1-800 RGVRGLAPGT GARLSGKPVL WEPLVHAPLQ AAAVTSNVAI ALTHQRGPLP ENSBTAP00000022679/1-783 RGVRGLAPST GAQLSGKPVL WEPLVHAPLQ AAAVTSNVAI ALTHQRGPLP BACU003962/1-786 RGVRGLAPGT GARLSGKPVL WEPLVHAPLQ AAAVTSNVAI ALTHQRGPLP ENSTTRP00000008973/1-780 RGVRGLAPGT GARLSGKPVL WEPLVHAPLQ AAAVTSNVAI ALTHQRGPLP 651 700 ENSP00000357342/1-774 LSPDSPATLL ARSAWRS--A GSPASPLVPV RA------GP WASTSRLPAP bmy_03387T0/1-800 LSPDSPVTLL ARSARRSAGA GSPASPLVPV RAGPLLARGP WASTSRLPAP ENSBTAP00000022679/1-783 LSPDSPVTLL ARSARRSAGA GSPASPLVPV RAGP-LARGP WASTSRLPAP BACU003962/1-786 LSPDSPVTLL ARSARRSAGA GSPASPLVPV RAGPLLARGP WASPSRLPAP ENSTTRP00000008973/1-780 LSPDSPVTLL ARSARRSAGA GSPASPLVPV RA------GP WASTSRLPAP 701 750 ENSP00000357342/1-774 PARTLHASLS RAGRSQVSLL GPPPGGGGRR LGPRGRPLSA SQPSLPQRAT bmy_03387T0/1-800 PARTLHASLS RAGRSQVSLL GPPPGGGGRR LGPRGRPLSA SQPSLPQRAA ENSBTAP00000022679/1-783 PARTLHASLS RAGRSQVSLL GPPPGGGGRR LGPRGRPLSA SQPSLPQRAA BACU003962/1-786 PARTLHASLS RAGRSQVSLL GPPPGGGGRR LGPRGRPLSA SQPSLPQRAA ENSTTRP00000008973/1-780 PARTLHASLS RAGRSQVSLL GPPPGGGGRR LGPRGRPLSA SQPSLPQRAA 751 800 ENSP00000357342/1-774 GDGSPGRKGS GSERLPPSGL LAKPPRTAQP PRPPVPEPAT PRGLQLSANM bmy_03387T0/1-800 GDGSPGCKGS GSERLPPSGL LAKPPGTAQP PRPSVPEPAT PRGPQLSSNM ENSBTAP00000022679/1-783 GDGSPGRKGS GSERLPPSGL LTKPPGTAQL PRLPVPEPAT PRGPQLSANM BACU003962/1-786 GDGSPGCKGS GSERLPPSGL LAKPPGTAQP PRPSVPEPAT PRGPQLSSNM ENSTTRP00000008973/1-780 GDGSPGCKGS GGERLPPSGL LAKPPGTAQP PRPSVPEPAT PRGPQLSSNM