KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:22 2014 Check: 00 .. Name: ENSP00000401191/1-298 Len: 298 Check: 8549 Weight: 1.00 Name: ENSBTAP00000022697/1-281 Len: 298 Check: 4925 Weight: 1.00 Name: ENSTTRP00000007980/1-280 Len: 298 Check: 2051 Weight: 1.00 Name: bmy_00371T0/1-250 Len: 298 Check: 6594 Weight: 1.00 Name: BACU012021/1-251 Len: 298 Check: 2091 Weight: 1.00 // 1 50 ENSP00000401191/1-298 MASRGRRPEH GGPPELFYDE TEARKYVRNS RMIDIQTRMA GRALELLYLP ENSBTAP00000022697/1-281 MAFRGRRPEL RGPPELYYDK NEARKYVRNS RMIDVQIKMT GRALELLCVP ENSTTRP00000007980/1-280 MAARGQRPEH SGPPELFYDK NEARKYVRNS RMIDVQTKMA GRALELLCLP bmy_00371T0/1-250 MASRRQRPEH SGPPELFYDK NEARKYVRNS RMIDVQTKMA GRALELLCLP BACU012021/1-251 MASRGQRPEH SGPPELFYDK NEARKYVRNS RMIDVQTKMA GRALELLCLP 51 100 ENSP00000401191/1-298 ENKPCYLLDI GCGTGLSGSY LSDEGHYWVG LDISPAMLDE AVDREIEGDL ENSBTAP00000022697/1-281 EDKPCYVLDI GCGTGLSGDY LSDEGHYWVG IDISPAMLDE ALDRETQGDV ENSTTRP00000007980/1-280 EGQPCYLLDI GCGSGLSGDY LSDEGHYWVG IDISPAMLDV ALDRDTEGDL bmy_00371T0/1-250 EDQPCYLLDI GCGSGLSGDY LSDEGHYWVG IDISPAMLG- ---------- BACU012021/1-251 EDQPCYLLDI GCGSGLSGDY LSDEGHYWVG LDISPAMLDA ALDRDTEGDL 101 150 ENSP00000401191/1-298 LLGDMGQGIP FKPGTFDGCI SISAVQWLCN ANKKSENPAK RLYCFFASLF ENSBTAP00000022697/1-281 ILGDMGQGIP FKPGTFDACI SISAVQWLCN ANKKSDIPAK RLYCFFSSLY ENSTTRP00000007980/1-280 LLGDMGQGIP FKPGTFDGCI SISAVQWLCS ANKKSDIPAK RLYCFFSALY bmy_00371T0/1-250 ---------- ---------- NISAVQWLCN ANKKXDIPAK RLYCFFSSLY BACU012021/1-251 LLGDMGQGIP FKPGSFDGCI SISAVQWLCN ANKKSDIPAK RLYCFFSSLY 151 200 ENSP00000401191/1-298 SVLVRGSRAV LQLYPENSEQ LELITTQATK AGFSGGMVVD YPNSAKAKKF ENSBTAP00000022697/1-281 SVLVRGGRAV LQLYPENSEQ LELITTQATR AGFTGGVVVD YPNSAKAKKF ENSTTRP00000007980/1-280 SVLVHGT-AV LQLYXXXXXX LELITTQATR AGFTGGVLVD YPNSARAKKF bmy_00371T0/1-250 SVLVHGARAV LQLYPENSEQ LELITTQATK AGFTGGVVVD YPNSARAKKF BACU012021/1-251 SVLVHGARAV LQLYPENSEQ LELITTQATK AGFTGGVVVD YPNSARAKKF 201 250 ENSP00000401191/1-298 YLCLFSGPST FIPEGLSENQ DEVEPRESVF TNEREGGAFE RRGIRGHQTR ENSBTAP00000022697/1-281 YLCLFSGPST SLPEGLSEDT EEEKPAESTF TAD------- ---------- ENSTTRP00000007980/1-280 YLCLFSGPST FIPMAQNEDN EEEEARESTF TVE------- ---------- bmy_00371T0/1-250 YLCLFSGPST FIPMAQSEEN EEEEARESTF TVE------- ---------- BACU012021/1-251 YLCLFSGPST FIPMAQSEEN EQEEARESTF TVE------- ---------- 251 300 ENSP00000401191/1-298 RFPLRMSRRG MVRKSRAWVL EKKERHRRQG REVRPDTQYT GRKRKPRF ENSBTAP00000022697/1-281 RIPYRIARRG VVRKSREWVL EKKARRRRQG KEVCPDTQYT GRKRKPRF ENSTTRP00000007980/1-280 RVPYRMARRG VVRKSREWVL EKKERRRRQG KEVRPDTQYT GRKRKPRF bmy_00371T0/1-250 RVPYRMARRG VVRKSREWVL EKKERRRRQG KEVRPDTQYT GRKRKPRF BACU012021/1-251 R--------- ---------- ---------- -EVRPDTQYT GRKRKPRF