KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:22 2014 Check: 00 .. Name: ENSTTRP00000016550/1-246 Len: 319 Check: 2204 Weight: 1.00 Name: bmy_20691T0/1-204 Len: 319 Check: 9891 Weight: 1.00 Name: BACU015029/1-319 Len: 319 Check: 5670 Weight: 1.00 Name: ENSBTAP00000022698/1-246 Len: 319 Check: 4155 Weight: 1.00 // 1 50 ENSTTRP00000016550/1-246 MLGGQLVCWH LLALLFLPFC LCQDEYME-- ---------- ---------- bmy_20691T0/1-204 MLGRQLVCWH LLALLFLPFC LCQDEYME-- ---------- ---------- BACU015029/1-319 MLGRQLVCWH LLALLFLPFC LCQDEYMEVS GRANRVVARI VQSHQQTGRS ENSBTAP00000022698/1-246 MLGRQLVYWH LLALLFLPFC LCQDEYME-- ---------- ---------- 51 100 ENSTTRP00000016550/1-246 ---------- ---------- ---------- ---------- ---------- bmy_20691T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU015029/1-319 GSKREKVRER SYPKTGTVDN NTSTDLKPLR PDELPHPEVD DLAQITPFWG ENSBTAP00000022698/1-246 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000016550/1-246 -SPQTGGLPP DCSKCCHGDY SFRGYQGPPG PPGLPGIPGN HGNNGNNGAT bmy_20691T0/1-204 -SPQTGGLPP DCSKCCHGDY SFRGYQGPPG PPGLPGIPG- ---------- BACU015029/1-319 QSPQTGGLPP DCSKCCHGDY SFRGYQGPPG PPGLPGIPGN HGNNGNNGAT ENSBTAP00000022698/1-246 -SPQTGGLPP DCSKCCHGDY SFRGYQGPPG PPGPPGIPGN HGNNGNNGAT 151 200 ENSTTRP00000016550/1-246 GHEGAKGEKG DKGDLGPRGE RGQHGPKGEK GYPGIPPELQ IAFMASLATH bmy_20691T0/1-204 --------KD ERDALFP--- ---------- ---------- IAFMASLATH BACU015029/1-319 GHEGAKGEKG DKGDLGPRGE RGQHGPKGEK GYPGIPPELQ IAFMASLATH ENSBTAP00000022698/1-246 GHEGAKGEKG DKGDLGPRGE RGQHGPKGEK GYPGIPPELQ IAFMASLATH 201 250 ENSTTRP00000016550/1-246 FSNQNSGIIF SSVETNIGNF FDVMTGRFGA PVSXXXXXXX XXXXXXXXXX bmy_20691T0/1-204 FSNQNSGIIF SSVETNIGNF FDVMTGRFGA PVSGVYFFTF SMMKHEDVEE BACU015029/1-319 FSNQNSGIIF SSVETNIGNF FDVMTGRFGA PVSGVYFFTF SMMKHEDVEE ENSBTAP00000022698/1-246 FTNQNSGIIF SSVETNIGNF FDVMTGRFGA PVSGVYFFTF SMMKHEDVEE 251 300 ENSTTRP00000016550/1-246 XXXXXXXXXX XXXXXXXYET KGKSDTSSNH AVLKLAKGDE VWLRMGNGAL bmy_20691T0/1-204 VYVYLMHNGN TVFSMYSYET KGKSDTSSNH AVLKLAKGDE VWLRMGNGAL BACU015029/1-319 VYVYLMHNGN TVFSMYSYET KGKSDTSSNH AVLKLAKGDE VWLRMGNGAL ENSBTAP00000022698/1-246 VYVYLMHNGN TVFSMYSYET KGKSDTSSNH AVLKLAKGDE VWLRMGNGAL 301 350 ENSTTRP00000016550/1-246 HGDHQRFSTF AGFLLFETK bmy_20691T0/1-204 HGDHQRFSTF AGFLLFETK BACU015029/1-319 HGDHQRFSTF AGFLLFETK ENSBTAP00000022698/1-246 HGDHQRFSTF AGFLLFETK