KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:24 2014 Check: 00 .. Name: ENSP00000377396/1-527 Len: 528 Check: 6219 Weight: 1.00 Name: ENSBTAP00000022701/1-360 Len: 528 Check: 4660 Weight: 1.00 Name: ENSTTRP00000009414/1-525 Len: 528 Check: 184 Weight: 1.00 Name: BACU019637/1-507 Len: 528 Check: 4450 Weight: 1.00 Name: bmy_22044T0/1-320 Len: 528 Check: 7581 Weight: 1.00 // 1 50 ENSP00000377396/1-527 MTCPDKPGQL INWFICSLCV PRVRKLWSSR RPRTRRNLLL GTACAIYLGF ENSBTAP00000022701/1-360 MSCPDKPGQL INWFLCSLCV PRVRKLWSSR RPRTRRNLLL GTACAIYLGF ENSTTRP00000009414/1-525 MSCPDKPGQL INWFLSSLCV PRVRKLWSSR RPRTRRNLLL GTACAIYLGF BACU019637/1-507 MSCPDQPGQL LNWFLSSLCV PRARKLWSSR RPRTRRNLLL GTACAIYLGF bmy_22044T0/1-320 MSCPDQPGQL LNWFLSSLCV PRVRKLWSSR RPRTRRNLLL GTACAIYLGF 51 100 ENSP00000377396/1-527 LVSQVGRASL QHGQAAEKGP HRSRDTAEPS FPEIPLDGTL APPESQGNGS ENSBTAP00000022701/1-360 LVSQVGRASV QHARPAGKGP HRSRAATEAP FPEIPLDGTL APPESQGNGT ENSTTRP00000009414/1-525 LVSQVGRASA PHGGRARKGP HWSRATAEAP FPEIPLDGTL APPESQGNGT BACU019637/1-507 LVSQAGRASA PHGGRARQGP HWSRATAEAP FPEIPLDGTL APPEAQGNGT bmy_22044T0/1-320 LVSQVGRASA PHGGRARRGP HWSRATAEAP FPEIPLDGTL APPEAQGNGT 101 150 ENSP00000377396/1-527 TLQP-NVVYI TLRSKRSKPA NIRGTVKPKR RKKHAVASAA PGQEALVGPS ENSBTAP00000022701/1-360 TLQP-NVVYI TLRSKRSKPA NIRGTVKPKR RKKYAVASRV PGPEALVGPS ENSTTRP00000009414/1-525 TLQP-NVVYI TLRSKRSKPA SIRGTVKPKR RKKYAVASQA PGPGTLVGPS BACU019637/1-507 TLQPNNVVYI TLRSKRSKPA SIRGTVKPKR RKKYALASQA PGPGALVGPS bmy_22044T0/1-320 TLQPNNVVYI TLRSKRSKPA SIRGTVKPKR RKKYAGASQA PGPGALVGPS 151 200 ENSP00000377396/1-527 LQPQEAAREA DAVAPGYAQG ANLVKIGERP WRLVRGPGVR AGGPDFLQPS ENSBTAP00000022701/1-360 LRPQVAARAV DSEVPGHVPG GNLAKAGERP WRWIQGPRAR GGGADVQLPL ENSTTRP00000009414/1-525 LRAQEAARAA DAEVPGHVRG GNLAKAGERP WGWMQGVGAQ GGDADVQLPR BACU019637/1-507 LRPQEAARAA EAEVAGHVRG GNLAQAGERP WGWRQGLGAR GGDADVQGPR bmy_22044T0/1-320 LRPQEAARAA EAEVPGHVRG GNLAKAGERP WGWRQGLGAQ GGDADXQLPR 201 250 ENSP00000377396/1-527 SRESNIRIYS ESAPSWLSKD DIRRMRLLAD SAVAGLRPVS SRSGARLLVL ENSBTAP00000022701/1-360 AVESNIRIYS ESAPSWLSKE DIGQMRLLAN GAVAGLQPAQ SRSGARLLVL ENSTTRP00000009414/1-525 AEGSNIRIYS ESAPSWLSGE DIGRMRLLAD GTVAGLQPAW PRSRARLLVL BACU019637/1-507 AGGSNIRIYS ESAPSWLSGD DIGRMRLLAD GAVAGLQPAW PGGRAR---- bmy_22044T0/1-320 AEGSNIRIYS ESAPSWLSGE DIGRMRLLAD GAVAGLQPAW PAGRARLLVL 251 300 ENSP00000377396/1-527 EGGAPGAVLR CGPSPCGLLK QPLDMSEVFA FHLDRILGLN RTLPSVSRKA ENSBTAP00000022701/1-360 EGTTRPSVPA CGPSPCGLLK QSLDMSEVFA FHLDRILGLN RTLPSVSRKS ENSTTRP00000009414/1-525 QGTGRPAGPA CGPSPCGLLK QPLDMSEVFA FHLDRILGLN RTLPSVSRKS BACU019637/1-507 ---------- ----PCGLLK QPLDMSEVFA FHLDRILGLN RTLPCVSRKS bmy_22044T0/1-320 EGTGRPAAPA CGPSPCGLLK QPLDMSEVFA FHLDRILGLN RTLPSVSRKS 301 350 ENSP00000377396/1-527 EFIQAAAAAC LSMRLAFFIF PAWEDMRVPG KCCIGHARLT WGTYQQLLKQ ENSBTAP00000022701/1-360 EFIQ------ ---------- ---------- ---------- ---------- ENSTTRP00000009414/1-525 EFIQAAAR-- LSIRLASSIF SAWEDARVRG RCCAAHARXX XXXXXXXXXX BACU019637/1-507 EFIQAAAR-- LSMRLASSIF SA-GDTRAPG RCCAAHAIEA PAAQSVLSVP bmy_22044T0/1-320 EFIQ------ ---------- ---------- ---------- ---------- 351 400 ENSP00000377396/1-527 KCWQNGRVPK PESGCTEIHH HEWSKMALFD FLLQIYNRLD TNCCGFRPRK ENSBTAP00000022701/1-360 ---DHGESLT SLKKKGDVMG FGLQEAYSS- ---------- ---------- ENSTTRP00000009414/1-525 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXIYNRLD INCCGFRPQK BACU019637/1-507 LAALPSGLLH PIKARGNFFV FTQHLGFVFV FPYQIYNRLD TNCCGFRPRK bmy_22044T0/1-320 ---------- -----GNRFP -----GFLF- ---------- ---------- 401 450 ENSP00000377396/1-527 EDACVQNGLR PKCDDQGSAA LAHIIQRKHD PRHLVFIDNK GFFDRSEDNL ENSBTAP00000022701/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009414/1-525 EDACVQSGRR AKCDNQDAVA LAHIVQRKQD PRHLVFIDNK GFFDRSEDNL BACU019637/1-507 EDACVQSGRR LKCENQDAVA LAHIVQRKQD PRHLVFIDNQ GFFDRSEDNL bmy_22044T0/1-320 --AAVGD--- ---------- ---------- ---------- ---------- 451 500 ENSP00000377396/1-527 NFKLLEGIKE FPASAVSVLK SQHLRQKLLQ SLFLDKVYWE SQGGRQGIEK ENSBTAP00000022701/1-360 --------QE FMASSSTLAN TK-------- --------WP RTASPRCDEH ENSTTRP00000009414/1-525 NFKLLEGIKE FPESAVSVLK SQHLRQKLLQ SLFLDKVYWE SQGGRQGIEK BACU019637/1-507 NFKLLEGIKE FPESAVSVLK SQHLRQKLLQ SLFLDKVYWE SQGGRQGIEK bmy_22044T0/1-320 ---------- ---------- ---------- --------WA ---------- 501 550 ENSP00000377396/1-527 LIDVIEHRAK ILITYINAHG VKVLPMNE ENSBTAP00000022701/1-360 FIGKM----- ---------- -------- ENSTTRP00000009414/1-525 LIDVVEQRAK VLLTYITAHG AKVLPMNE BACU019637/1-507 LIDVVEQRAR ILLTYINAHG AKVLPMNE bmy_22044T0/1-320 ---------- ---------- --------