KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:26 2014 Check: 00 .. Name: ENSP00000379057/1-465 Len: 472 Check: 5226 Weight: 1.00 Name: ENSBTAP00000022714/1-457 Len: 472 Check: 9737 Weight: 1.00 Name: bmy_17026T0/1-388 Len: 472 Check: 3206 Weight: 1.00 Name: ENSTTRP00000007725/1-457 Len: 472 Check: 120 Weight: 1.00 // 1 50 ENSP00000379057/1-465 MGLSPNLDRQ TMAEFSQKRG KRRSDEGLGS MVDFLLANAR LVLGVGGAAV ENSBTAP00000022714/1-457 ---------- ----XSQNRS KRRDGEVLGG AVDFLLANAR LVLGVGGAAV bmy_17026T0/1-388 ---------- ---------- MRNCHQALAV REDLSLVLSQ VV-------- ENSTTRP00000007725/1-457 ------SGRQ TMAEFSQNRG KRRDSEVLGG AVDFLLANAR LVLGVGGAAV 51 100 ENSP00000379057/1-465 LGIATLAVKR FIDRATSPRD EDDTK----- -ADSWKELSL LKATPHLQPR ENSBTAP00000022714/1-457 LGIATLAVKR LIDRATSPRD EDDTKGDAPC LEDSWQDLSL LKATPRLQSR bmy_17026T0/1-388 ---------- ----TLHPSD TG-------- ---------- ---------- ENSTTRP00000007725/1-457 LGIATLAVKR LIDRATSPRD EDDAK----- -EDSWQELSL LKATPRLQPQ 101 150 ENSP00000379057/1-465 PPPAALSQPV LPLAPSSSAP EGPAETDPEV TPQLSSPAP- LCLTLQERLL ENSBTAP00000022714/1-457 PPPAALSQPV PPPAPSLSAP EGPADTGPQT LPLLSSPAPP LCLTFQEKLL bmy_17026T0/1-388 PPP------- ------LHST EGPADADPPT SPQLCSPAPS MCLTFQEKLL ENSTTRP00000007725/1-457 PRPAALSQPV PPPAPSPSAP EGPADADPPT SPQPCSPAPS VCLTFQEKLL 151 200 ENSP00000379057/1-465 AFERDRVTIP AAQVALAKQL AGDIALELQA YFRSKFPELP FGAFVPGGPL ENSBTAP00000022714/1-457 AFERDHVTVP GAHVSLAKQL AGDIALELQA YLRNKFPDLP FGALVPGGPL bmy_17026T0/1-388 AFERDHVTMP VAHVALAKQL AGDIALELQA YLRNKFPELP FGALVPGGPL ENSTTRP00000007725/1-457 AFERDHVTMP VAHVALAKQL AGDIALELQA YLRNKFPELP FGALVPGGPL 201 250 ENSP00000379057/1-465 YDGLQAGAAD HVRLLVPLVL EPGLWSLVPG VDTVARDPRC WAVRRTQLEF ENSBTAP00000022714/1-457 YEGLQVGAAD PVRLLVPLAL EPGLWSLVAG SDTVAQDPRC WAVRRTQLEF bmy_17026T0/1-388 YDGLQAGAAD PVRLLVPLAL EPGLWSLVPG VDTVARDPRC WAVRRTQLEF ENSTTRP00000007725/1-457 YDGLQAGAAD PVRLLVPLVL EPGLWSLVPG VDTVAQDPRC WAVRRTQLEF 251 300 ENSP00000379057/1-465 CPRGSSPWDR FLVGGYLSSR VLLELLRKAL AASVNWPAIG SLLGCLIRPS ENSBTAP00000022714/1-457 RPRGSSPWDR FLVGGYLSSR VLLELLRKAL TASVNWPAIG SLLGCLIRPC bmy_17026T0/1-388 HPRGSSPWDR FLVGGYLSSR VLLGLLRQAL TASVNWPAIG ILLGCLVRPR ENSTTRP00000007725/1-457 HPRGSSPWDR FLVGGYLSPR VLLELLRKAL TASVNWPAIG SLLGCLIRPR 301 350 ENSP00000379057/1-465 MASEELLLEV QHERLELTVA VLVAVPGVDA DDRLLLAWPL EGLAGNLWLQ ENSBTAP00000022714/1-457 VASDELLLEV QHECLELTVA VLLAVAGAQD GD-LLLAWPL EGLAGNLWLQ bmy_17026T0/1-388 VASEELLLEV QHECLDFPVA VLLAIAGAQA GG-LLLAWPL EGLAGNFWLQ ENSTTRP00000007725/1-457 GAS-ELLLEV QHEVLELPVA VLLSTAGAQA GD--QLAWPL EGLAGNLWLQ 351 400 ENSP00000379057/1-465 DLYPVEAARL RALDDHDAGT RRRLLLLLCA VCRGCSALGQ LGRGHLTQVV ENSBTAP00000022714/1-457 DWYPAEAARL RALDEQDAGT RRRLLLLLCA VCRSHPALWR LGRDRLAQVV bmy_17026T0/1-388 DWYPAEAARL RALDERDAGT RRRLLLLLCG VCRGHPALGR LGRGPLTQVV ENSTTRP00000007725/1-457 DWYPAEAAQL RALDERDAGT RRRLLLLLCG VCRGHPALGR LGRGPLTQVV 401 450 ENSP00000379057/1-465 LRLGEDNVDW TEEALGERFL QALELLIGSL EQASLPCHFN PSVNLFSSLR ENSBTAP00000022714/1-457 LRLGEQEADW AEEALGEHFL QALELLLSSL ERASLPSHFN RSVNLLDGLR bmy_17026T0/1-388 LHLGEQEADW GEEALGERFL QALELLIGSL ERASLPCHFS RGVNLLDGLR ENSTTRP00000007725/1-457 LHLGEQEADW AEEALAEHFL QALELLVGSL EQASLPCHFS RGVNLLDGLR 451 500 ENSP00000379057/1-465 EEEIDDIGYA LYSGLQEPEG LL ENSBTAP00000022714/1-457 EEEIDDLGFA LYHGLQAPEG LL bmy_17026T0/1-388 EEDIDDMGCA LYWGLRAPEG LL ENSTTRP00000007725/1-457 EEDIDDMGCA LYWGLRAPER LL