KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:31 2014 Check: 00 .. Name: ENSP00000321636/1-1001 Len: 1051 Check: 9846 Weight: 1.00 Name: ENSBTAP00000022721/1-1002 Len: 1051 Check: 3473 Weight: 1.00 Name: bmy_17027T0/1-1048 Len: 1051 Check: 910 Weight: 1.00 Name: ENSTTRP00000007726/1-1003 Len: 1051 Check: 1986 Weight: 1.00 // 1 50 ENSP00000321636/1-1001 MIFPVARYAL RWLRRPEDRA FSRAAMEMAL RGVRKVLCVA EKNDAAKGIA ENSBTAP00000022721/1-1002 MIFPAAHRAL RGLPRPGTRA LTRAAMEVAL RGVRKILCVA EKNDAAKGIA bmy_17027T0/1-1048 MIFPAARCAL RWLPRPGSRA LTLADMEVAL RGVRKILCVA EKNDAAKGIA ENSTTRP00000007726/1-1003 MIFPVVRRAL TWLQRPGSRA LTLADMEVAL RGVRKILCVA EKNDAAKGIA 51 100 ENSP00000321636/1-1001 DLLSNGRMRR REGLSKFNKI YEFDYHLYGQ NVTMVMTSVS GHLLAHDFQM ENSBTAP00000022721/1-1002 DLLSGGRMRR REGLSRFNKI YEFDYHLCGQ NVTMVMTSVS GHLLAHDFRM bmy_17027T0/1-1048 DLLSGGRMRR REGLSRFNKI YEFDYRLRGQ NVTMIMTSVS GHLLAHDFQM ENSTTRP00000007726/1-1003 DLLSGGRMRR REGLSRFNKI YEFDYCLRGQ NVTMIMTSVS GHLLAHDFQM 101 150 ENSP00000321636/1-1001 QFRKWQSCNP LVLFEAEIEK YCPENFVDIK KTLERETRQC QALVIWTDCD ENSBTAP00000022721/1-1002 QFRKWQSCNP LVLFEAEIEK YCPENFVDIK KTLEREAQQC QALVIWTDCD bmy_17027T0/1-1048 QFRKWQSCNP LVLFEAEIEK YCPENYLDIK KTLEREARQC QVLVIWTDCD ENSTTRP00000007726/1-1003 QFRKWQSCNP LVLFEAEIEK YCPENFLDIK KTLEREARQC QVLVIWTDCD 151 200 ENSP00000321636/1-1001 REGENIGFEI IHVCKAVKPN LQVLRARFSE ITPHAVRTAC ENLTEPDQRV ENSBTAP00000022721/1-1002 REGENIGFEV IHVCKAVKPS LQVLRARFSE ITTRAVRTAC ENLTEPDQRV bmy_17027T0/1-1048 REGENIGFEI IHVCKAVKPS LQVLRARFSE ITARAVQAAC ENLMEPDRRV ENSTTRP00000007726/1-1003 REGENIGFEI IHVCKAVKPS LHVLRARFSE ITARAVQAAC ENLMEPDRRV 201 250 ENSP00000321636/1-1001 SDAVDVRQEL DLRIGAAFTR FQTLRLQRIF PEVLAEQLIS YGSCQFPTLG ENSBTAP00000022721/1-1002 SDAVDVRQEL DLRIGAAFTR FQTLRLQKIF PEVLAEQLIS YGSCQFPTLG bmy_17027T0/1-1048 SDAVDVRQEL DLRIGAAFTR FQTLRLQKIF PEVLAEQLIS YGSCQFPTLG ENSTTRP00000007726/1-1003 SDAVDVRQEL DLRIGAAFTR FQTLRLQKIF PEVLAEQLIS YGSCQFPTLG 251 300 ENSP00000321636/1-1001 FVVERFKAIQ AFVPEIFHRI KVTHDHKDGI VEFNWKRHRL FNHTACLVLY ENSBTAP00000022721/1-1002 FVVERFKAIQ AFVPEVFHKI RVTHDHRDGV VEFSWKRHRL FNHTACLVLY bmy_17027T0/1-1048 FVVERFKAIQ AFVPETFHKI RVTHDHRDGA VEFSWKRHRL FNHTACLVLY ENSTTRP00000007726/1-1003 FVVERFKAIQ AFVPETFHRI RVTHDHRDGA VEFSWKRHRL FNHTACLVLY 301 350 ENSP00000321636/1-1001 QLCVEDPMAT VV-------- ---------- --------EV RSKPKSK--- ENSBTAP00000022721/1-1002 QMCMEDPRAM VV-------- ---------- --------EV RSKAKSK--- bmy_17027T0/1-1048 QLCMEDVVQG NMAGSQGDRG GGQVQGKKQV EASSFGHCAV RKQLEGRREV ENSTTRP00000007726/1-1003 QLCMEDPRAT VV-------- ---------- --------EV RSKAKSK--- 351 400 ENSP00000321636/1-1001 --------WR PQALDTV--- ---ELEKLAS RKLRINAKET MRIAEKLYTQ ENSBTAP00000022721/1-1002 --------WR PQALDTV--- ---ELEKLAS RKLRINAKET MRIAEKLYTQ bmy_17027T0/1-1048 LKRRRVACWG LRLMHCACPH ILQELEKLAS RKLRINAKET MRIAEKLYTQ ENSTTRP00000007726/1-1003 --------WR PQALDTV--- ---ELEKLAS RKLRINAKET MRIAEKLYTQ 401 450 ENSP00000321636/1-1001 GYISYPRTET NIFPRDLNLT VLVEQQTPDP RWGAFAQSIL ERGGPTPRNG ENSBTAP00000022721/1-1002 GYISYPRTET NIFPKDLDLA ALVEQQTPDP RWGAFARNIL ERGGPTPRNG bmy_17027T0/1-1048 GYISYPRTET NIFPKDLDLT ALVEEQTPDP RWGPFAQSIL ERGGPTPRNG ENSTTRP00000007726/1-1003 GYISYPRTET NIFPKDLDLT ALVEEQTHDP RWGPFAQSIL ERGGPTPRNG 451 500 ENSP00000321636/1-1001 NKSDQAHPPI HPTKYTNNLQ GDEQRLYEFI VRHFLACCSQ DAQGQETTVE ENSBTAP00000022721/1-1002 NKSDQAHPPI HPTKYTDSLQ GDEQRLYELI VRHFLACCSQ DAQGQETTVE bmy_17027T0/1-1048 NKSDQAHPPI HPTKYTDSLQ GDEQRLYELI VRHFLACCSQ DAQGQETTVE ENSTTRP00000007726/1-1003 NKSDQAHPPI HPTKYTDSLQ GDEQRLYELI VRHFLACCSQ DAQGQETTVE 501 550 ENSP00000321636/1-1001 IDIAQERFVA HGLMILARNY LDVYPYDHWS DKILPVYEQG SHFQPSTVEM ENSBTAP00000022721/1-1002 IDIAQERFVA HGLMILARNY LDVYPYDRWS DKTLPVYEQG TCFQPSTVEM bmy_17027T0/1-1048 IDIAQERFVA HGLMILARNY LDVYPYDRWS DKTLPVYSQG SCFQPSTVEM ENSTTRP00000007726/1-1003 IDIAQERFVA HGLVILARNY LDVYPYDRWS EKTLPVYSRG SCFQPSTVEM 551 600 ENSP00000321636/1-1001 VDGETSPPKL LTEADLIALM EKHGIGTDAT HAEHIETIKA RMYVGLTPDK ENSBTAP00000022721/1-1002 VDGETSPPQL LTEADLIALM EKHGIGTDAT HAEHIETIKA RMYVGLTPDK bmy_17027T0/1-1048 VDGETSPPQL LTEADLIALM EKHGIGTDAT HAEHIETIKA RMYVGLTPDK ENSTTRP00000007726/1-1003 VDGETSPPQL LTEADLIALM EKHGIGTDAT HAEHIETIKA RMYVGLTPDK 601 650 ENSP00000321636/1-1001 RFLPGHLGMG LVEGYDSMGY EMSKPDLRAE LEADLKLICD GKKDKFVVLR ENSBTAP00000022721/1-1002 RFLPGHLGMG LVEGYDSMGY EMSKPDLRAE LEADLKLICE GKKDKLVVLH bmy_17027T0/1-1048 RFLPGHLGMG LVEGYDSMGY EMSKPDLRAE LEADLKLICE GKKDKLVVLQ ENSTTRP00000007726/1-1003 RFLPGHLGMG LVEGYDSMGY EMSKPDLRAE LEADLKLICE GKKDKLVVLQ 651 700 ENSP00000321636/1-1001 QQVQKYKQVF IEAVAKAKKL DEALAQYFGN GTELAQQEDI YPAMPEPIRK ENSBTAP00000022721/1-1002 QQVQKYKQVF IEAVAKARKL DEALSQYFGA ATEVAPQDAL -PAVPEPIRK bmy_17027T0/1-1048 QQVQKYKQVF IEAMAKAQRL DEALSQYFGA GAELAQQEAI FPAVPEPVRK ENSTTRP00000007726/1-1003 QQVQKYKQVF IEAMAKAQRL DEALSQYFGA GVELAQQEAI FPAVPEPVRK 701 750 ENSP00000321636/1-1001 CPQCNKDMVL KTKKNGGFYL SCMGFPECRS AVWLPDSVLE ASRDSSVCPV ENSBTAP00000022721/1-1002 CPQCSRDMVL KTRKSGGFYL GCTGFPECRS AVWFPDSVLE ASRDVSVCPV bmy_17027T0/1-1048 CPQCGKDMVL KTRKSGGFYL SCTGFPQCRS AVWFPDSVLE ASRDGSVCPV ENSTTRP00000007726/1-1003 CPQCGKDMVL KTRKSGGFYL SCTGFPECRS AVWFPDSVLE ASRDGSVCPV 751 800 ENSP00000321636/1-1001 CQPHPVYRLK LKFKRGSLPP TMPLEFVCCI GGCDDTLREI LDLRFSGGPP ENSBTAP00000022721/1-1002 CQPHPVYRLK FKFKRGSLPP TMPLEFVGCI GGCDETLREI LALRFSQGAA bmy_17027T0/1-1048 CQPHPVYRLK FKFKRGSLPP TMPLEFVGCV GGCDETLREI LDLRFSQGPP ENSTTRP00000007726/1-1003 CQPHPVYRLK FKFKRGSLPP TMPLEFVGCV GGCDETLREI LDLRFSRGPT 801 850 ENSP00000321636/1-1001 RASQP----S GRLQANQSLN RMDNSQ--HP QPADSRQTGS SKALAQTLPP ENSBTAP00000022721/1-1002 RVSQPASQTS GYLQASQSLN RMDSGQQGQP RPPVTR---P SKALTRTLPP bmy_17027T0/1-1048 RAGQPVSQPS GHLQASQALN RMGSSQHGHP QPPATR---P SKALARTLPL ENSTTRP00000007726/1-1003 RAGQPVSQPS GHLQASQPLD RMGSSQHGHP QPPAIR---P SNALARTAPL 851 900 ENSP00000321636/1-1001 PTAAGESNSV TCNCGQEAVL LTVRKEGPNR GRQFFKCNGG SCNFFLWADS ENSBTAP00000022721/1-1002 PAVESESNSV TCNCGQEALL LTVRKEGPNQ GRQFYKCGSG GCSFFLWADS bmy_17027T0/1-1048 PAAEGESNSV TCNCGREALL LTVRKEGPNQ GRQFYRCSSG GCSFFLWADS ENSTTRP00000007726/1-1003 PAAEGEGNSV TCNCGREALL LTVRKEGPNQ GRQFYKCSGG GCSFFLWADS 901 950 ENSP00000321636/1-1001 PNPGAGGPPA LAYRPLGASL GCPPGPGIHL GGFGNPGD-G SGSGTSCLCS ENSBTAP00000022721/1-1002 GHPGA-GPPS SASRPPGGPL EHPPGSGTLL GGSSRPGS-G GSGGASCLCG bmy_17027T0/1-1048 GHPEAGGRPS EVPRPPGGSL GRPPGSGKPL GGPRSPGDGG GGGGACCLCS ENSTTRP00000007726/1-1003 GHPEAGGPPS EVPRPPGGSL GRPPGSGKPL GGPGSPGD-- GGGGARCLCS 951 1000 ENSP00000321636/1-1001 QPSVTRTVQK DGPNKGRQFH TCAKPREQQC GFFQWVDENT APGTSGAPSW ENSBTAP00000022721/1-1002 QPAVTRTVQK EGPNQGRQFH TCAQPREHQC GFFQWVDENV APGTFGGPLW bmy_17027T0/1-1048 QPAVTRTVQK DGPNKGRQFH TCAKPREQQC GFFQWVDENV APGTFGGPPW ENSTTRP00000007726/1-1003 QPAVTRTVQK DGPNKGRQFH TCAKPREQQC GFFQWVDENV APGTFGGPPW 1001 1050 ENSP00000321636/1-1001 TGDRGRTLES EARSKRPRAS SSDMGSTAKK PRKCSLCHQP GHTRPFCPQN ENSBTAP00000022721/1-1002 PGSRRGTQGL EARSKRPRAG SSDTGSAAKK PRKCSLCHQP GHTRPFCPQN bmy_17027T0/1-1048 AGARGGSQGP EARSKRARAG SSDAGSAAKK PRKCSLCHQP GHTRPFCPQN ENSTTRP00000007726/1-1003 AGARGGSREP EARSKRARAG SSDAGSAAKK PRKCSLCHQP GHTRPFCPQN 1051 1100 ENSP00000321636/1-1001 R ENSBTAP00000022721/1-1002 R bmy_17027T0/1-1048 R ENSTTRP00000007726/1-1003 R