KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:33 2014 Check: 00 .. Name: ENSP00000362550/1-835 Len: 894 Check: 5484 Weight: 1.00 Name: ENSBTAP00000022726/1-835 Len: 894 Check: 4689 Weight: 1.00 Name: bmy_05873T0/1-545 Len: 894 Check: 5576 Weight: 1.00 Name: ENSTTRP00000002626/1-834 Len: 894 Check: 2947 Weight: 1.00 // 1 50 ENSP00000362550/1-835 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022726/1-835 ---------- ---------- ---------- ---------- ---------- bmy_05873T0/1-545 RDPSATTRPA DRGGLVGKRN WGRRRRLWQR QGQAWWRRHR RPDPPLSAPW ENSTTRP00000002626/1-834 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362550/1-835 ---------M KRRTDPECTA PIKKQKKRVA ELALSLSSTS DDEPPSSVSH ENSBTAP00000022726/1-835 ---------M KRRNDSECTA PLKKQKKRVA ELALSLSSTS DDEPPSSVNH bmy_05873T0/1-545 QLALFLQLTM RRRNDSECTA PLKKQKKRVA ELGLNLSSTS DDEPPSSVNH ENSTTRP00000002626/1-834 ---------M RRRNDSECTA PLKKQKKRVA ELALNLSSTS DDEPPSSVNH 101 150 ENSP00000362550/1-835 GAKASTTSLS GSDSETEGKQ HSSDSFDDAF KADSLVEGTS SRYSMYNSVS ENSBTAP00000022726/1-835 AAKASATSLS GSDSETEGKQ RSSDSFDDAF KADSLVEGTS SRYSMYNSVS bmy_05873T0/1-545 AAKASATSLS GSDSETEGKQ RSSDSFDDAF KADSLVEGTS SRYSMYNSVS ENSTTRP00000002626/1-834 AAKASATSLS GSDSETEGKQ RSSDSFDDAF KADSLVEGTS SRYSMYNSVS 151 200 ENSP00000362550/1-835 QKLMAKMGFR EGEGLGKYSQ GRKDIVEASS QKGRRGLGLT LRGFDQELNV ENSBTAP00000022726/1-835 QKLMAKMGFK EGEGLGKYSQ GRKDIVEASN QKGRRGLGLT LQGFDQELNV bmy_05873T0/1-545 QKLM------ ---------- GRKDIVEASN QKGRRGLGLT LQGFDQELNV ENSTTRP00000002626/1-834 QKLMAKMGFK EGEGLGKYSQ GRKDIVEASN QKGRRGLGLT LQGFDQELNV 201 250 ENSP00000362550/1-835 DWRDEPEPSA CEQVSWFPEC TTEIPDTQEM SDWMVVGKRK MIIEDETEFC ENSBTAP00000022726/1-835 NWRDEPEPSA CEQVSWFPEC TTEIPDTQEM SDWMVVGKRK MIIEDETEFC bmy_05873T0/1-545 DWRAEPEPSA CEQVSWFPEC TTEIPDTQEM SDWMVVGKRK MIIEDETEFC ENSTTRP00000002626/1-834 DWRAEPEPSA CEQVSWFPEC TTEIPDTQEM SDWMVVGKRK MIIEDETEFC 251 300 ENSP00000362550/1-835 GEELLHSVLQ CKSVFDVLDG EEMRRARTRA NPYEMIRGVF FLNRAAMKMA ENSBTAP00000022726/1-835 GEGLLRSVLK CKSVFDVLDG EEMRRARTRA NPYEMIRGVF FLNRAAMKMA bmy_05873T0/1-545 GEELLHSVLQ CKNVFDILDG EEMRRARTRA NPYEMIRGVF FLNRAAMKMA ENSTTRP00000002626/1-834 GEELLHSVLQ CKNVFDVLDG EEMRRARTRA NPYEMIRGVF FLNRAAMKMA 301 350 ENSP00000362550/1-835 NMDFVFDRMF TNPRDSYGKP LVKDREAELL YFADVCAGPG GFSEYVLWRK ENSBTAP00000022726/1-835 NMDFVFDRMF TNPRDSYGKP LVKDREAELL YFADVCAGPG GFSEYVLWRK bmy_05873T0/1-545 NMDFVFDRMF TNPRDSYGKP LVKDREAELL YFADVCAGPG GFSEYVLWRK ENSTTRP00000002626/1-834 NMDFVFDRMF TNPRDSYGKP LVKDREAELL YFADVCAGPG GFSEYVLWRK 351 400 ENSP00000362550/1-835 KWHAKGFGMT LKGPNDFKLE DFYSASSELF EPYYGEGGID GDGDITRPEN ENSBTAP00000022726/1-835 RWHAKGFGLT LKGPHDFKLE DFYSASSELF EPYYGEGGID GDGDITRPEN bmy_05873T0/1-545 KWHAKGFGMT LKGPNDFKLE DFYSASSELF EPYYGEGGID GDGDITRPEN ENSTTRP00000002626/1-834 KWHAKGFGMT LKGPNDFKLE DFYSASSELF EPYYGEGGID GDGDITRPEN 401 450 ENSP00000362550/1-835 ISAFRNFVLD NTDRKGVHFL MADGGFSVEG QENLQEILSK QLLLCQFLMA ENSBTAP00000022726/1-835 INAFRNFVLD NTDHKGVHFL MADGGFSVEG QENLQEILSK QLLLCQFLMA bmy_05873T0/1-545 ITAFRNFVLD NTDRKGVHFL MADGGFSVEG QENLQEILSK QLLLCQFLMA ENSTTRP00000002626/1-834 ITAFRNFVLD NTDRKGVHFL MADGGFSVEG QENLQEILSK QLLLCQFLMA 451 500 ENSP00000362550/1-835 LSIVRTGGHF ICKTFDLFTP FSVGLVYLLY CCFERVCLFK PITSRPANSE ENSBTAP00000022726/1-835 LSVVRTGGHF ICKTFDLFTP FSVGLIYLLY CCFERVCLFK PITSRPANSE bmy_05873T0/1-545 LSVVRTGGHF ICKTFDLFTP FSVGLVYLLY CCFERVCLFK PITSRPANSE ENSTTRP00000002626/1-834 LSVVRTGGHF ICKTFDLFTP FSVGLIYLLY CCFERVCLFK PITSRPANSE 501 550 ENSP00000362550/1-835 RYVVCKGLKV GIDDVRDYLF AVNIKLNQLR NTDSDVNLVV PLEVIKGDHE ENSBTAP00000022726/1-835 RYVVCKGLKV GIDEVRDYLF SVNIKLNQLR NTDSDVNLVV PLEVIKGDHE bmy_05873T0/1-545 RYVVCKGLKV GIDDVRDYLF SVNIKLNQLR NTDSDVNLVV PLEVIKGDHE ENSTTRP00000002626/1-834 RYVVCKGLKV GIDDVRDYLF SVNIKLNQLR NTDSDVNLVV PLEVIKGDHE 551 600 ENSP00000362550/1-835 FTDYMIRSNE SHCSLQIKAL AKIHAFVQDT TLSEPRQAEI RKECLRLWGI ENSBTAP00000022726/1-835 FTDYMIRSNE GHCSLQIKAL AKIRAFVQDT TLIEPRQAEI RKECLRLWGI bmy_05873T0/1-545 FTDYVIRSNE R--------- ---------- ---------- ---------- ENSTTRP00000002626/1-834 FTDYVIRSNE SHCSLQIKAL AKIHAFVQDT TLSEPRQAEI RKECLRLWGI 601 650 ENSP00000362550/1-835 PDQARVAPSS SDPKSKFFEL IQGTEIDIFS YKPTLLTSKT LEKIRPVFDY ENSBTAP00000022726/1-835 PDQARVAPSS TDPKSKFFEL IQGTEIDIFS YKPTPLTAKT LEKIRPVLDY bmy_05873T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002626/1-834 PDQARVAPSS TDPKSKFFEL IQGTEIDIFS YKPTLLTSKT LEKIRPVLDY 651 700 ENSP00000362550/1-835 RCMVSGSEQK FLIGLGKSQI YTWDGRQSDR WIKLDLKTEL PRDTLLSVEI ENSBTAP00000022726/1-835 RCMVSGSEQK FLIGLGKSQI YTWDGRQSDR WVKLDLKTEL PRDTLLSVEI bmy_05873T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002626/1-834 RCMVSGSEQK FLIGLGKSQI YTWDGRQSDR WVKLDLKTEL PRDTLLSVEI 701 750 ENSP00000362550/1-835 VHELKGEGKA QRKISAIHIL DVLVLNGTDV REQHFNQRIQ LAEKFVKAVS ENSBTAP00000022726/1-835 VHELKGEGKA QRKISAIHIL DVLVLNGSDV REQHFNQRIQ LAEKFVKAVS bmy_05873T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002626/1-834 VHELKGEGKA QRKISAIHIL DVLVLNGSDV REQHFNQRIQ LAEKFVKAVS 751 800 ENSP00000362550/1-835 KPSRPDMNPI RVKEVYRLEE MEKIFVRLEM KIIKGSSGTP KLSYTGRDDR ENSBTAP00000022726/1-835 KPSRPDMNPI RVKEVYRLEE MEKIFVRLEM KIIKGSSGTP KLSYTGRDDR bmy_05873T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002626/1-834 KPSRPDMNPI RVKEVYRLEE MEKIFVRLEM KIIKGSSGTP KLSYTGRDDR 801 850 ENSP00000362550/1-835 HFVPMGLYIV RTVNEPWTMG FSKSFKKKFF YNKKTKDSTF DLPADSIAPF ENSBTAP00000022726/1-835 HFVPTGLYIV RTVNEPWTMG FSKSFKRKFF YNKKTKNSTF DLPADAIAPF bmy_05873T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002626/1-834 HFVPTGLYIV RTVNEPWTMG FSKSFKRKFF YNKKTKNSTF DLPSDAIAPF 851 900 ENSP00000362550/1-835 HICYYGRLFW EWGDGIRVHD SQKPQDQDKL SKEDVLSFIQ MHRA ENSBTAP00000022726/1-835 HICYYGRLFW EWGDGIRVHE SQKPQDPDKL SKEDVLSFIQ THSA bmy_05873T0/1-545 ---------- ---------- ---------- ---------- ---- ENSTTRP00000002626/1-834 HICYYGRLFW EWGDGIRVHD SQKPQDPDKL CKEDVLS-IQ THSA