KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:53 2014 Check: 00 .. Name: ENSTTRP00000013598/1-555 Len: 661 Check: 6921 Weight: 1.00 Name: BACU017635/1-526 Len: 661 Check: 5726 Weight: 1.00 Name: ENSP00000361949/1-660 Len: 661 Check: 3738 Weight: 1.00 Name: ENSBTAP00000022761/1-645 Len: 661 Check: 4332 Weight: 1.00 Name: bmy_02095T0/1-660 Len: 661 Check: 4440 Weight: 1.00 // 1 50 ENSTTRP00000013598/1-555 ---------- ---------- ---------- ---------- ---------- BACU017635/1-526 MNAAASSYPM ASLYVGDLHS DVTEAMLYEK FSPAGPVLSI RVCRDMITRR ENSP00000361949/1-660 MNAAASSYPM ASLYVGDLHS DVTEAMLYEK FSPAGPVLSI RVCRDMITRR ENSBTAP00000022761/1-645 MNAAASSYPM ASLYVGDLHS DVTEAMLYEK FSPAGPVLSI RVCRDMITRR bmy_02095T0/1-660 MNAAASSYPM ASLYVGDLHS DVTEAMLYEK FSPAGPVLSI RVCRDMITRR 51 100 ENSTTRP00000013598/1-555 ---------- -----ERALD TMNFDVIKGK PIRIMWSQRD PSLRKSGVGN BACU017635/1-526 SLGYAYVNFQ QLADAERALD TMNFDVIKGK PIRIMWSQRD PSLRNSGMGN ENSP00000361949/1-660 SLGYAYVNFQ QPADAERALD TMNFDVIKGK PIRIMWSQRD PSLRKSGVGN ENSBTAP00000022761/1-645 SLGYAYVNFQ QPADAERALD TMNFDVIKGK PIRIMWSQRD PSLRKSGVGN bmy_02095T0/1-660 SLGYAYVNFQ QPADAERALD TMNFDVIKGK PIRIMWSQRD PSLRXSGXGN 101 150 ENSTTRP00000013598/1-555 VFIKNLDKSI DNKALYDTFS AFGNILSCKV VCDENGSKGY AFVHFETQEA BACU017635/1-526 VFIKNLDKSI DNKALYDTFS AFGNILSCKV VCDENGSKGY AFVHFETQEA ENSP00000361949/1-660 VFIKNLDKSI DNKALYDTFS AFGNILSCKV VCDENGSKGY AFVHFETQEA ENSBTAP00000022761/1-645 VFIKNLDKSI DNKALYDTFS AFGNILSCKV VCDENGSKGY AFVHFETQEA bmy_02095T0/1-660 VFIKNLDKSI DNKALYDTFS AFGNILSCKV VCDENGSKGY AFVHFETQEA 151 200 ENSTTRP00000013598/1-555 ADKAIEKMNG MLLNDRK--- ---------- ---------- ---------- BACU017635/1-526 ADKAIEKMNG MLLNDRKVFV GRFKSRKERE AELGAKAKEF TNVYIKNFGE ENSP00000361949/1-660 ADKAIEKMNG MLLNDRKVFV GRFKSRKERE AELGAKAKEF TNVYIKNFGE ENSBTAP00000022761/1-645 ADKAIEKMNG MLLNDRKVFV GRFKSRKERE AELGAKAKEF TNVYIKNFGE bmy_02095T0/1-660 ADKAIEKMNG MLLNDRKVFV GRFKSRKERE AELGAKAKEF TNVYIKNFGE 201 250 ENSTTRP00000013598/1-555 -------KEL FSQFXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAVEE BACU017635/1-526 EVDDESLKEL FSQF------ ---------- ---------- ---------- ENSP00000361949/1-660 EVDDESLKEL FSQFGKTLSV KVMRDPNGKS KGFGFVSYEK HEDANKAVEE ENSBTAP00000022761/1-645 EVDDENLKEL FSQFGKTLSV KVMRDPSGKS KGFGFVSYEK HEDANKAVEE bmy_02095T0/1-660 EVDDESLKEL FSQFGKTLSV KVMRDPSGKS KGFGFVSYEK HEDANKAVEE 251 300 ENSTTRP00000013598/1-555 MNGKEISGKV IFVGRAQKKV ERQAELKRKF EQLKQERISR YQGVNLYIKN BACU017635/1-526 ---------- ---------- ---------- ---------- ---------- ENSP00000361949/1-660 MNGKEISGKI IFVGRAQKKV ERQAELKRKF EQLKQERISR YQGVNLYIKN ENSBTAP00000022761/1-645 MNGKEITGKV IFVGRAQKKV ERQAELKRKF EQLKQERISR YQGVNLYIKN bmy_02095T0/1-660 MNGKEISGKV IFVGRAQKKV ERQAELKRKF EQLKQERISR YQGVNLYIKN 301 350 ENSTTRP00000013598/1-555 LDDTIDDEKL RKEFSPFGSI TSAKVMLEDG RSKGFGFVCF SSPEEATKAV BACU017635/1-526 ---------- ---------- ---------- ---------- ----EATKAV ENSP00000361949/1-660 LDDTIDDEKL RKEFSPFGSI TSAKVMLEDG RSKGFGFVCF SSPEEATKAV ENSBTAP00000022761/1-645 LDDTIDDEKL RKEFSPFGSI TSAKVMLEDG RSKGFGFVCF SSPEEATKAV bmy_02095T0/1-660 LDDTIDDEKL RKEFSPFGSI TSAKVMLEDG RSKGFGFVCF SSPEEATKAV 351 400 ENSTTRP00000013598/1-555 TEMNGRIVGS KPLYVALAQR KEERKAHLTN QYMQRVAGMR ALPANAILNQ BACU017635/1-526 TEMNGRIVGS KPLYVALTQR KEERKAHLTN QYMQRVVGIR ALPANTILNQ ENSP00000361949/1-660 TEMNGRIVGS KPLYVALAQR KEERKAHLTN QYMQRVAGMR ALPANAILNQ ENSBTAP00000022761/1-645 TEMNGRIVGS KPLYVALAQR KEERKAHLTN QYMQRVAGMR ALPANAILNQ bmy_02095T0/1-660 TEMNGRIVGS KPLYVALAQR KEERKAHLTN QYMQRVAGMR ALPANAILNQ 401 450 ENSTTRP00000013598/1-555 FQPAAGGYFV PAVPQAQGRP PYYTPNQLAQ MRPNPRWQQG GRPQGFQGMP BACU017635/1-526 FQPAAGGYFV PAVPQAQGRP PHYTPNQLAQ MRPNPRWQQG GRPQGFQGMP ENSP00000361949/1-660 FQPAAGGYFV PAVPQAQGRP PYYTPNQLAQ MRPNPRWQQG GRPQGFQGMP ENSBTAP00000022761/1-645 FQPAAGGYFV PAVPQAQGRP PYYTPNQLAQ MRPNPRWQQG GRPQGFQGMP bmy_02095T0/1-660 FQPAAGGYFV PAVPQAQGRP PYYTPNQLAQ MRPNPRWQQG GRPQGFQGMP 451 500 ENSTTRP00000013598/1-555 SAIRQSGPRP ALRHLAPTGN APASRGLPTT AQRVGSECPD RLAMDFGGAG BACU017635/1-526 SAIRQSGPRP ALRHLAPTGN APASRGLPTT AQRVGSECPN CLAMDFGGAG ENSP00000361949/1-660 SAIRQSGPRP TLRHLAPTGN APASRGLPTT TQRVGSECPD RLAMDFGGAG ENSBTAP00000022761/1-645 SAIRQSGPRP ALRHLAPT-- ---------- ----GSECPD RLAMDFGGAG bmy_02095T0/1-660 SAIRQSGPRP ALRHLAPTGN APASRGLPTT AQRVGSECPD RLAMDFGGAG 501 550 ENSTTRP00000013598/1-555 AAQQGLTDSC QSGGVPTAVQ SLAPRAAVAT AA-PRAVAPY KYASSVRSPH BACU017635/1-526 AAQQGLTDSC QSGGVPTAVQ NLAPRAAA-- ---PRAVAPY KYASGVCSPH ENSP00000361949/1-660 AAQQGLTDSC QSGGVPTAVQ NLAPRAAVAA AA-PRAVAPY KYASSVRSPH ENSBTAP00000022761/1-645 AAQQGLTDSC QSGGVPTAVQ NLAPRAAVAA AAAPRAVAPY KYASSIRSPH bmy_02095T0/1-660 AAQQGLTDSC QSGGVPTAVQ NLAPRAAVAA AA-PRAVAPY KYASSVRSPH 551 600 ENSTTRP00000013598/1-555 PAIQPLQAPQ PAVHVQGQEP LTASMLAAAP PQEQKQMLGE RLFPLIQTMH BACU017635/1-526 SAIRPLQAPQ PVVHVQGQEP LTASMLAAAP PQEQKQMLGE RLFPLIQTMH ENSP00000361949/1-660 PAIQPLQAPQ PAVHVQGQEP LTASMLAAAP PQEQKQMLGE RLFPLIQTMH ENSBTAP00000022761/1-645 PAIQPLQAPQ PAVHVQGQEP LTASMLAAAP PQEQKQMLGE RLFPLIQTMH bmy_02095T0/1-660 PAIQPLQAPQ PAVHVQGQEP LTASMLAAAP PQEQKQMLGE RLFPLIQTMH 601 650 ENSTTRP00000013598/1-555 SNLAGKITGM LLEIDNSELL HMLESPESLR SKVDEAVAVL QAHHAKKEAA BACU017635/1-526 SNLAGKITGM LLEIDNSELL HMLESPESLR SKVDEAVAVL QAHHAKKEAA ENSP00000361949/1-660 SNLAGKITGM LLEIDNSELL HMLESPESLR SKVDEAVAVL QAHHAKKEAA ENSBTAP00000022761/1-645 SNLAGKITGM LLEIDNSELL HMLESPESLR SKVDEAVAVL QAHHAKKEAA bmy_02095T0/1-660 SNLAGKITGM LLEIDNSELL HMLESPESLR SKVDEAVAVL QAHHAKKEAA 651 700 ENSTTRP00000013598/1-555 QKVGAVAAAT S BACU017635/1-526 QKVGVVAAAT S ENSP00000361949/1-660 QKVGAVAAAT S ENSBTAP00000022761/1-645 QKVGAVAAAT S bmy_02095T0/1-660 QKVGAVAAAT S